Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G1159 Fragaria x ananassa HOM05D006344 ORTHO05D007744 9.8e-283 976.1 479 100.0
FAN10G0415 Fragaria x ananassa HOM05D006344 ORTHO05D007744 6.4e-282 973.4 479 99.6
FvH4_7g10380 Fragaria vesca HOM05D006344 ORTHO05D007744 4.9e-274 947.2 479 97.1
FAN06G2435 Fragaria x ananassa HOM05D006344 ORTHO05D007744 4.9e-274 947.2 479 97.1
FAN01G1631 Fragaria x ananassa HOM05D006344 ORTHO05D007744 6.6e-271 936.8 479 96.7
FAN03G0097 Fragaria x ananassa HOM05D006344 ORTHO05D007744 6.2e-269 930.2 528 88.8
FAN06G3766 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.7e-266 922.2 479 95.0
RcHm_v2.0_Chr1g0348081 Rosa chinensis HOM05D006344 ORTHO05D007744 3.9e-255 884.4 481 90.0
MD07G1109900 Malus domestica HOM05D006344 ORTHO05D007744 6.3e-221 770.8 498 76.9
Prupe.2G133500 Prunus persica HOM05D006344 ORTHO05D007744 5.1e-215 751.1 506 74.7
QL04p029920 Quercus lobata HOM05D006344 ORTHO05D007744 3.5e-187 658.7 496 67.9
CANSAT25G2006 Cannabis sativa HOM05D006344 ORTHO05D007744 4.2e-185 651.7 501 65.7
VMungo0331G0733 Vigna mungo HOM05D006344 ORTHO05D007744 2.3e-183 646.0 495 67.1
Potri.002G138600 Populus trichocarpa HOM05D006344 ORTHO05D007744 7.5e-182 641.0 510 64.5
Haze_02860 Corylus avellana HOM05D006344 ORTHO05D007744 8.3e-181 637.5 513 65.3
Cfa011061 Carpinus fangiana HOM05D006344 ORTHO05D007744 1.4e-180 636.7 511 65.6
Phvul.010G046700 Phaseolus vulgaris HOM05D006344 ORTHO05D007744 1.4e-180 636.7 494 66.6
CSS0005629 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 5.9e-179 631.3 460 68.9
Manes.05G055800 Manihot esculenta HOM05D006344 ORTHO05D007744 5.9e-179 631.3 507 63.7
CSS0047635 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 7.7e-179 630.9 460 69.3
Eucgr.D01222 Eucalyptus grandis HOM05D006344 ORTHO05D007744 1.9e-177 626.3 439 69.9
Lj3g0017960 Lotus japonicus HOM05D006344 ORTHO05D007744 2.3e-175 619.4 490 65.7
Glyma.12G152700 Glycine max HOM05D006344 ORTHO05D007744 1.2e-174 617.1 487 66.3
Sabra02G0107400 Salix brachista HOM05D006344 ORTHO05D007744 1.2e-174 617.1 532 60.7
arahy.Tifrunner.gnm1.ann1.7K9T15 Arachis hypogaea HOM05D006344 ORTHO05D007744 6.3e-173 611.3 475 66.5
arahy.Tifrunner.gnm1.ann1.6KIV37 Arachis hypogaea HOM05D006344 ORTHO05D007744 1.1e-172 610.5 475 66.3
Duzib133G0621 Durio zibethinus HOM05D006344 ORTHO05D007744 2.4e-172 609.4 488 64.1
MELO3C005945.2 Cucumis melo HOM05D006344 ORTHO05D007744 3.2e-172 609.0 501 62.7
Thecc.01G396400 Theobroma cacao HOM05D006344 ORTHO05D007744 7.0e-172 607.8 484 65.5
Glyma.06G240000 Glycine max HOM05D006344 ORTHO05D007744 1.6e-171 606.7 493 65.3
Oeu011251.1 Olea europaea HOM05D006344 ORTHO05D007744 7.8e-171 604.4 453 66.4
GSVIVG01018294001 Vitis vinifera HOM05D006344 ORTHO05D007744 1.0e-170 604.0 367 77.7
Nn1g00813 Nelumbo nucifera HOM05D006344 ORTHO05D007744 2.3e-170 602.8 465 67.3
Lalb_Chr12g0210531 Lupinus albus HOM05D006344 ORTHO05D007744 2.9e-170 602.4 487 64.7
vmacro13505 Vaccinium macrocarpon HOM05D006344 ORTHO05D007744 5.0e-170 601.7 495 64.0
ECA234G3853 Erigeron canadensis HOM05D006344 ORTHO05D007744 6.6e-170 601.3 437 68.9
Migut.B01523 Erythranthe guttata HOM05D006344 ORTHO05D007744 1.5e-169 600.1 421 71.0
TWI23G1150 Tripterygium wilfordii HOM05D006344 ORTHO05D007744 2.5e-169 599.4 506 61.5
THA.LOC104802498 Tarenaya hassleriana HOM05D006344 ORTHO05D007744 4.3e-169 598.6 492 61.6
Cc02_g25170 Coffea canephora HOM05D006344 ORTHO05D007744 7.3e-169 597.8 512 61.5
Duzib138G0679 Durio zibethinus HOM05D006344 ORTHO05D007744 1.2e-168 597.0 531 61.0
SGA_v2.0_scaffold52G19234 Striga asiatica HOM05D006344 ORTHO05D007744 1.2e-168 597.0 448 66.3
EL10Ac1g00751 Beta vulgaris HOM05D006344 ORTHO05D007744 2.8e-168 595.9 455 66.2
Ciclev10019814m.g Citrus clementina HOM05D006344 ORTHO05D007744 3.6e-168 595.5 486 62.8
TPR.G32142 Trifolium pratense HOM05D006344 ORTHO05D007744 4.7e-168 595.1 503 62.2
MSTRG.20684 Avicennia marina HOM05D006344 ORTHO05D007744 8.0e-168 594.3 479 63.3
CiPaw.14G019800 Carya illinoinensis HOM05D006344 ORTHO05D007744 2.3e-167 592.8 500 63.0
Gohir.A12G097600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 3.1e-167 592.4 511 61.6
Medtr8g007155 Medicago truncatula HOM05D006344 ORTHO05D007744 3.1e-167 592.4 509 62.5
SalBow8G3479 Salvia bowleyana HOM05D006344 ORTHO05D007744 2.0e-166 589.7 463 64.8
Ca_14805_v3 Cicer arietinum L. HOM05D006344 ORTHO05D007744 3.4e-166 589.0 440 67.5
Gohir.D12G100600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 4.4e-166 588.6 513 61.8
Thhalv10001417m.g Eutrema salsugineum HOM05D006344 ORTHO05D007744 5.8e-166 588.2 448 66.5
Sp4g26830 Schrenkiella parvula HOM05D006344 ORTHO05D007744 1.7e-165 586.6 479 64.3
A05p04940 Brassica napus HOM05D006344 ORTHO05D007744 2.9e-165 585.9 475 63.4
BcaB02g08857 Brassica carinata HOM05D006344 ORTHO05D007744 3.7e-165 585.5 441 66.4
Sopen10g011810 Solanum pennellii HOM05D006344 ORTHO05D007744 6.4e-165 584.7 478 62.1
HanXRQChr17g0562521 Helianthus annuus HOM05D006344 ORTHO05D007744 8.3e-165 584.3 511 60.9
Aqoxy3G02683 Aquilegia oxysepala HOM05D006344 ORTHO05D007744 1.4e-164 583.6 517 61.1
PSO782G2130 Papaver somniferum HOM05D006344 ORTHO05D007744 2.4e-164 582.8 476 63.2
Psat4g223640 Pisum sativum HOM05D006344 ORTHO05D007744 5.4e-164 581.6 482 62.4
Dinv44052 Davidia involucrata HOM05D006344 ORTHO05D007744 1.2e-163 580.5 386 73.1
Gorai.008G109500 Gossypium raimondii HOM05D006344 ORTHO05D007744 2.0e-163 579.7 508 61.4
BraA05t19467Z Brassica rapa HOM05D006344 ORTHO05D007744 4.6e-163 578.6 475 62.5
Lsat_1_v5_gn_4_39300 Lactuca sativa HOM05D006344 ORTHO05D007744 4.6e-163 578.6 435 66.0
CARHR139980 Cardamine hirsuta HOM05D006344 ORTHO05D007744 6.0e-163 578.2 491 61.9
Sc26g0001660 Simmondsia chinensis HOM05D006344 ORTHO05D007744 1.7e-162 576.6 490 61.4
C04p05760 Brassica napus HOM05D006344 ORTHO05D007744 2.5e-161 572.8 475 61.9
AL4G43840 Arabidopsis lyrata HOM05D006344 ORTHO05D007744 3.3e-161 572.4 434 67.1
AUR62023399 Chenopodium quinoa HOM05D006344 ORTHO05D007744 9.5e-161 570.9 432 64.4
BcaC02g12272 Brassica carinata HOM05D006344 ORTHO05D007744 2.1e-160 569.7 475 61.1
BolC4t22205H Brassica oleracea HOM05D006344 ORTHO05D007744 2.1e-160 569.7 475 61.1
AUR62013752 Chenopodium quinoa HOM05D006344 ORTHO05D007744 2.1e-160 569.7 433 65.8
unitig_0.g1343 Utricularia gibba HOM05D006344 ORTHO05D007744 3.6e-160 568.9 462 62.6
AT2G44760 Arabidopsis thaliana HOM05D006344 ORTHO05D007744 1.8e-159 566.6 427 66.0
Hund17097 Selenicereus undatus HOM05D006344 ORTHO05D007744 5.2e-159 565.1 449 63.9
Rhsim07G0037100 Rhododendron simsii HOM05D006344 ORTHO05D007744 8.9e-159 564.3 503 60.2
TAR375G1150 Trochodendron aralioides HOM05D006344 ORTHO05D007744 1.2e-158 563.9 517 60.2
Nitab4.5_0000228g0070 Nicotiana tabacum HOM05D006344 ORTHO05D007744 1.2e-155 553.9 546 56.4
Aa31LG1G26310 Aethionema arabicum HOM05D006344 ORTHO05D007744 1.6e-155 553.5 481 59.5
Carub.0004s2733 Capsella rubella HOM05D006344 ORTHO05D007744 1.6e-155 553.5 432 65.0
ClCG05G000130 Citrullus lanatus HOM05D006344 ORTHO05D007744 7.8e-155 551.2 488 59.8
COL.COLO4_12394 Corchorus olitorius HOM05D006344 ORTHO05D007744 7.8e-155 551.2 360 73.1
ATR0665G564 Amborella trichopoda HOM05D006344 ORTHO05D007744 3.9e-154 548.9 488 59.0
CsaV3_3G007240 Cucumis sativus L. HOM05D006344 ORTHO05D007744 2.0e-150 536.6 696 45.7
Zm00001eb427880 Zea mays HOM05D006344 ORTHO05D007744 3.4e-150 535.8 451 60.3
DCAR_025059 Daucus carota HOM05D006344 ORTHO05D007744 3.7e-149 532.3 448 60.5
Sed0012570 Sechium edule HOM05D006344 ORTHO05D007744 8.4e-149 531.2 428 62.6
Os04g0545200 Oryza sativa ssp. japonica HOM05D006344 ORTHO05D007744 5.1e-146 521.9 444 59.0
HPP92_012970 Vanilla planifolia HOM05D006344 ORTHO05D007744 5.1e-146 521.9 455 59.1
COL.COLO4_10415 Corchorus olitorius HOM05D006344 ORTHO05D007744 2.1e-144 516.5 432 62.0
PGR004G1920 Punica granatum HOM05D006344 ORTHO05D007744 3.1e-143 512.7 498 56.6
Actinidia18353 Actinidia chinensis HOM05D006344 ORTHO05D007744 5.1e-138 495.4 421 62.5
Cpa.g.sc22.25 Carica papaya HOM05D006344 ORTHO05D007744 6.2e-136 488.4 386 63.7
CDE06G1994 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 3.4e-134 482.6 450 55.6
Lj9C555G1 Lonicera japonica HOM05D006344 ORTHO05D007744 3.2e-116 422.9 259 76.8
Nitab4.5_0009461g0020 Nicotiana tabacum HOM05D006344 ORTHO05D007744 2.6e-110 403.3 335 59.7
Atru.chr5.116 Acer truncatum HOM05D006344 ORTHO05D007744 2.5e-97 360.1 242 72.3
Peaxi162Scf00103g00911 Petunia axillaris HOM05D006344 ORTHO05D007744 7.0e-87 325.5 195 77.4
Solyc10g037890.3 Solanum lycopersicum HOM05D006344 ORTHO05D007744 4.5e-78 296.2 184 76.1
Peaxi162Scf00103g00912 Petunia axillaris HOM05D006344 ORTHO05D007744 3.6e-75 286.6 315 52.7
PGSC0003DMG400026373 Solanum tuberosum HOM05D006344 ORTHO05D007744 4.8e-72 276.2 243 58.8
SEGI_37248 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 2.7e-70 270.4 226 55.8
Solyc10g037900.1 Solanum lycopersicum HOM05D006344 ORTHO05D007744 5.9e-70 269.2 252 56.0
Pp3c5_3810 Physcomitrium patens HOM05D006344 ORTHO05D007744 9.4e-68 261.9 582 32.5
PGSC0003DMG400003447 Solanum tuberosum HOM05D006344 ORTHO05D007744 6.1e-67 259.2 164 73.8
CAN.G768.2 Capsicum annuum HOM05D006344 ORTHO05D007744 2.6e-65 253.8 312 49.0
AagrBONN_evm.TU.Sc2ySwM_117.1538 Anthoceros agrestis HOM05D006344 ORTHO05D007744 3.0e-53 213.8 561 27.1
SMO340G0133 Selaginella moellendorffii HOM05D002542 ORTHO05D007744 1.9e-52 211.1 450 30.2
Mapoly0089s0048 Marchantia polymorpha HOM05D006344 ORTHO05D007744 5.6e-52 209.5 594 28.8
Atru.chr5.115 Acer truncatum HOM05D006344 ORTHO05D007744 1.5e-49 201.4 262 48.5
Lj9A555T32 Lonicera japonica HOM05D006344 ORTHO05D007744 9.2e-39 165.6 124 70.2
SMO356G0573 Selaginella moellendorffii HOM05D002542 ORTHO05D005078 3.0e-37 160.6 362 29.6
SEGI_14599 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 1.4e-31 141.7 152 52.6
HanXRQChr09g0257941 Helianthus annuus HOM05D006344 ORTHO05D007744 2.8e-27 127.5 144 50.0
SEGI_30390 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 4.2e-23 113.6 89 60.7
Actinidia26517 Actinidia chinensis HOM05D006344 ORTHO05D007744 3.5e-22 110.5 61 77.0
CDE06G0422 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 4.5e-17 93.6 58 67.2
Peaxi162Scf00562g00069 Petunia axillaris HOM05D006344 ORTHO05D007744 4.6e-14 83.6 139 36.7
CBR_g48168 Chara braunii HOM05D006344 ORTHO05D007744 6.7e-13 79.7 154 33.8
Peaxi162Scf00562g00611 Petunia axillaris HOM05D006344 ORTHO05D007744 4.8e-11 73.6 79 58.2
CBR_g48169 Chara braunii HOM05D006344 ORTHO05D007744 4.0e-10 70.5 98 37.8
BcaB08g35012 Brassica carinata HOM05D006344 ORTHO05D007744 2.6e-09 67.8 101 39.6
COL.COLO4_10413 Corchorus olitorius HOM05D006344 ORTHO05D007744 9.9e-09 65.9 63 55.6
HanXRQChr01g0015371 Helianthus annuus HOM05D000263 ORTHO05D000213 6.4e-08 63.2 42 66.7
Lsat_1_v5_gn_7_20540 Lactuca sativa HOM05D003720 ORTHO05D007744 1.2e-06 58.9 30 86.7


User provided reference genes

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