Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G0921 Fragaria x ananassa HOM05D002637 ORTHO05D009046 1.9e-63 245.7 127 100.0
FAN10G1525 Fragaria x ananassa HOM05D002637 ORTHO05D009046 1.5e-57 226.1 150 84.0
FAN03G2438 Fragaria x ananassa HOM05D002637 ORTHO05D009046 1.2e-46 189.9 150 72.0
FAN06G2425 Fragaria x ananassa HOM05D000001 ORTHO05D009896 3.9e-45 184.9 150 69.3
FvH4_7g09940 Fragaria vesca HOM05D002637 ORTHO05D009046 5.1e-45 184.5 150 69.3
FAN06G1198 Fragaria x ananassa HOM05D000001 ORTHO05D009896 5.1e-45 184.5 150 69.3
FAN01G0925 Fragaria x ananassa HOM05D002637 ORTHO05D009046 9.6e-44 180.3 150 67.3
Actinidia33504 Actinidia chinensis HOM05D002637 ORTHO05D009046 2.7e-30 135.6 148 47.3
Manes.12G109800 Manihot esculenta HOM05D002637 ORTHO05D009046 1.1e-28 130.2 148 48.6
Prupe.2G128200 Prunus persica HOM05D002637 ORTHO05D009046 2.5e-28 129.0 150 46.7
Migut.B01543 Erythranthe guttata HOM05D002637 ORTHO05D009046 1.6e-27 126.3 148 44.6
Cc02_g25010 Coffea canephora HOM05D002637 ORTHO05D009046 2.1e-27 125.9 148 45.9
Aa31LG6G14300 Aethionema arabicum HOM05D002637 ORTHO05D009046 3.7e-27 125.2 126 46.0
MD07G1104600 Malus domestica HOM05D002637 ORTHO05D009046 6.2e-27 124.4 148 45.9
RcHm_v2.0_Chr1g0347501 Rosa chinensis HOM05D002637 ORTHO05D009046 6.2e-27 124.4 144 48.6
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 2.4e-26 122.5 148 43.9
vmacro21056 Vaccinium macrocarpon HOM05D002637 ORTHO05D009046 2.4e-26 122.5 148 41.9
DCAR_029750 Daucus carota HOM05D002637 ORTHO05D000193 3.1e-26 122.1 148 43.9
PGR042G3993 Punica granatum HOM05D002637 ORTHO05D009046 4.0e-26 121.7 147 46.3
MD07G1105300 Malus domestica HOM05D002637 ORTHO05D009046 9.0e-26 120.6 148 43.9
Eucgr.E01572 Eucalyptus grandis HOM05D002637 ORTHO05D009046 1.5e-25 119.8 142 45.8
ECA234G1562 Erigeron canadensis HOM05D002637 ORTHO05D009046 2.0e-25 119.4 148 44.6
Dinv43628 Davidia involucrata HOM05D002637 ORTHO05D009046 2.6e-25 119.0 148 41.9
HanXRQChr16g0520331 Helianthus annuus HOM05D002637 ORTHO05D009046 5.8e-25 117.9 149 44.3
EL10Ac1g00772 Beta vulgaris HOM05D002637 ORTHO05D009046 1.7e-24 116.3 148 42.6
AT4G37445 Arabidopsis thaliana HOM05D002637 ORTHO05D009046 2.9e-24 115.5 144 41.0
BcaNung03660 Brassica carinata HOM05D002637 ORTHO05D009046 2.9e-24 115.5 142 42.3
Lsat_1_v5_gn_4_46620 Lactuca sativa HOM05D002637 ORTHO05D009046 2.9e-24 115.5 149 44.3
Sp7g35140 Schrenkiella parvula HOM05D002637 ORTHO05D009046 2.9e-24 115.5 144 40.3
AL7G13350 Arabidopsis lyrata HOM05D002637 ORTHO05D009046 3.8e-24 115.2 144 41.0
Thhalv10026444m.g Eutrema salsugineum HOM05D002637 ORTHO05D009046 3.8e-24 115.2 144 40.3
Potri.007G051200 Populus trichocarpa HOM05D002637 ORTHO05D009046 4.9e-24 114.8 141 41.8
Sc02g0003060 Simmondsia chinensis HOM05D002637 ORTHO05D009046 4.9e-24 114.8 141 42.6
CARHR245840 Cardamine hirsuta HOM05D002637 ORTHO05D009046 6.5e-24 114.4 144 40.3
Psat4g225240 Pisum sativum HOM05D002637 ORTHO05D009046 6.5e-24 114.4 144 41.7
BcaNung05079 Brassica carinata HOM05D002637 ORTHO05D009046 8.4e-24 114.0 144 40.3
Lj3g0027924 Lotus japonicus HOM05D002637 ORTHO05D009046 1.1e-23 113.6 146 41.8
Atru.chr3.227 Acer truncatum HOM05D002637 ORTHO05D009046 1.9e-23 112.8 145 41.4
Haze_02819 Corylus avellana HOM05D002637 ORTHO05D009046 2.5e-23 112.5 148 42.6
QL04p030668 Quercus lobata HOM05D002637 ORTHO05D009046 3.2e-23 112.1 139 44.6
Carub.0007s0284 Capsella rubella HOM05D002637 ORTHO05D009046 4.2e-23 111.7 144 40.3
Medtr8g006765 Medicago truncatula HOM05D002637 ORTHO05D009046 4.2e-23 111.7 141 40.4
Aqoxy3G02748 Aquilegia oxysepala HOM05D002637 ORTHO05D009046 5.5e-23 111.3 145 41.4
MSTRG.17133 Avicennia marina HOM05D002637 ORTHO05D009046 5.5e-23 111.3 150 41.3
C01p01670 Brassica napus HOM05D002637 ORTHO05D009046 5.5e-23 111.3 156 39.1
BolC1t00161H Brassica oleracea HOM05D002637 ORTHO05D009046 5.5e-23 111.3 156 39.1
Thecc.01G067000 Theobroma cacao HOM05D002637 ORTHO05D009046 5.5e-23 111.3 149 41.6
TPR.G33150 Trifolium pratense HOM05D002637 ORTHO05D009046 7.1e-23 110.9 145 39.3
A01p01510 Brassica napus HOM05D002637 ORTHO05D009046 1.2e-22 110.2 154 39.6
Duzib187G0274 Durio zibethinus HOM05D002637 ORTHO05D009046 1.2e-22 110.2 148 41.9
BraA01t00144Z Brassica rapa HOM05D002637 ORTHO05D009046 1.6e-22 109.8 154 39.6
Cfa011083 Carpinus fangiana HOM05D002637 ORTHO05D009046 1.6e-22 109.8 149 43.0
BcaNung02947 Brassica carinata HOM05D002637 ORTHO05D009046 2.7e-22 109.0 159 39.0
Manes.13G115300 Manihot esculenta HOM05D002637 ORTHO05D009046 2.7e-22 109.0 146 40.4
Ca_14060_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 6.0e-22 107.8 140 41.4
Ciclev10026646m.g Citrus clementina HOM05D002637 ORTHO05D009046 6.0e-22 107.8 151 41.7
Duzib147G1684 Durio zibethinus HOM05D002637 ORTHO05D009046 7.9e-22 107.5 149 38.9
TAR629G3341 Trochodendron aralioides HOM05D002637 ORTHO05D009046 7.9e-22 107.5 122 45.1
Lalb_Chr13g0290561 Lupinus albus HOM05D002637 ORTHO05D009046 1.8e-21 106.3 147 37.4
THA.LOC104807614 Tarenaya hassleriana HOM05D002637 ORTHO05D009046 1.8e-21 106.3 149 37.6
COL.COLO4_11517 Corchorus olitorius HOM05D002637 ORTHO05D009046 3.9e-21 105.1 142 39.4
Gorai.011G107300 Gossypium raimondii HOM05D002637 ORTHO05D009046 3.9e-21 105.1 142 41.5
Nitab4.5_0003696g0080 Nicotiana tabacum HOM05D002637 ORTHO05D009046 5.1e-21 104.8 144 41.7
Oeu063229.1 Olea europaea HOM05D002637 ORTHO05D009046 5.1e-21 104.8 148 37.8
TWI53G0102 Tripterygium wilfordii HOM05D002637 ORTHO05D009046 5.1e-21 104.8 148 38.5
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 5.1e-21 104.8 144 38.2
TPR.G12142 Trifolium pratense HOM05D002637 ORTHO05D009046 6.7e-21 104.4 149 41.6
PSO063G5174 Papaver somniferum HOM05D002637 ORTHO05D009046 8.7e-21 104.0 138 42.8
TAR629G0766 Trochodendron aralioides HOM05D002637 ORTHO05D009046 8.7e-21 104.0 138 40.6
Sabra07G0045200 Salix brachista HOM05D002328 ORTHO05D002433 2.5e-20 102.4 163 35.0
AUR62023418 Chenopodium quinoa HOM05D000001 ORTHO05D009896 3.3e-20 102.1 148 40.5
A01p01520 Brassica napus HOM05D002637 ORTHO05D009046 4.3e-20 101.7 147 38.8
BraA01t00145Z Brassica rapa HOM05D002637 ORTHO05D009046 4.3e-20 101.7 147 38.8
Hund17084 Selenicereus undatus HOM05D002637 ORTHO05D009046 7.4e-20 100.9 136 41.2
Nn1g00869 Nelumbo nucifera HOM05D002637 ORTHO05D009046 1.6e-19 99.8 141 37.6
TAR629G0936 Trochodendron aralioides HOM05D002637 ORTHO05D009046 2.2e-19 99.4 147 38.1
arahy.Tifrunner.gnm1.ann1.TJ44DN Arachis hypogaea HOM05D002637 ORTHO05D009046 4.8e-19 98.2 137 41.6
arahy.Tifrunner.gnm1.ann1.P225XX Arachis hypogaea HOM05D002637 ORTHO05D009046 6.3e-19 97.8 137 40.1
CiPaw.14G021200 Carya illinoinensis HOM05D002637 ORTHO05D009046 8.2e-19 97.4 139 38.1
Psat3g194760 Pisum sativum HOM05D002637 ORTHO05D009046 8.2e-19 97.4 143 39.2
CANSAT21G1080 Cannabis sativa HOM05D002637 ORTHO05D009046 2.4e-18 95.9 146 38.4
Lj1g0023703 Lotus japonicus HOM05D002637 ORTHO05D009046 4.1e-18 95.1 142 38.7
Medtr4g094628 Medicago truncatula HOM05D002637 ORTHO05D009046 4.1e-18 95.1 150 36.7
Rhsim01G0139600 Rhododendron simsii HOM05D002637 ORTHO05D009046 4.1e-18 95.1 120 44.2
Cpa.g.sc6.62 Carica papaya HOM05D003561 ORTHO05D004351 1.5e-17 93.2 130 40.8
Sopen01g036190 Solanum pennellii HOM05D002637 ORTHO05D009046 2.0e-17 92.8 149 36.9
VMungo0331G2001 Vigna mungo HOM05D002637 ORTHO05D009046 3.4e-17 92.0 138 36.2
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 4.5e-17 91.7 134 38.1
Phvul.010G051600 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 1.1e-15 87.0 138 36.2
Glyma.03G113700 Glycine max HOM05D002637 ORTHO05D009046 4.2e-15 85.1 142 33.8
Lj7A545G96 Lonicera japonica HOM05D002637 ORTHO05D009046 2.1e-14 82.8 131 39.7
SalBow5G5579 Salvia bowleyana HOM05D002637 ORTHO05D009046 2.1e-14 82.8 119 42.9
Manes.13G115400 Manihot esculenta HOM05D002637 ORTHO05D009046 6.1e-14 81.3 139 33.8
AUR62013735 Chenopodium quinoa HOM05D002637 ORTHO05D009046 1.8e-13 79.7 119 40.3
GSVIVG01018261001 Vitis vinifera HOM05D002637 ORTHO05D009046 2.3e-13 79.3 120 38.3
RcHm_v2.0_Chr1g0347531 Rosa chinensis HOM05D002637 ORTHO05D009046 8.8e-13 77.4 48 79.2
Nitab4.5_0003553g0040 Nicotiana tabacum HOM05D002637 ORTHO05D009046 1.9e-12 76.3 127 37.8
Glyma.07G113000 Glycine max HOM05D002637 ORTHO05D009046 1.7e-11 73.2 140 32.9
Ca_24158_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 2.2e-11 72.8 114 35.1
Ca_14062_v3 Cicer arietinum L. HOM05D000534 ORTHO05D009046 1.1e-10 70.5 113 34.5
BcaNung03659 Brassica carinata HOM05D002637 ORTHO05D009046 2.4e-10 69.3 49 61.2
GSVIVG01018259001 Vitis vinifera HOM05D002637 ORTHO05D009046 4.1e-10 68.6 106 37.7
Atru.chr3.216 Acer truncatum HOM05D002637 ORTHO05D009046 5.3e-10 68.2 51 60.8
TPR.G39072 Trifolium pratense HOM05D002637 ORTHO05D009046 9.1e-10 67.4 139 37.4
Peaxi162Scf00030g00043 Petunia axillaris HOM05D002637 ORTHO05D009046 1.2e-09 67.0 111 37.8
CSS0047370 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D009046 1.5e-09 66.6 53 56.6
A01p01540 Brassica napus HOM05D002637 ORTHO05D009046 3.4e-09 65.5 49 59.2
BraA01t00146Z Brassica rapa HOM05D002637 ORTHO05D016052 3.4e-09 65.5 49 59.2
Phvul.008G046000 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 1.3e-08 63.5 108 36.1
ATR0057G030 Amborella trichopoda HOM05D002637 ORTHO05D009046 2.9e-08 62.4 132 29.5
Os02g0126600 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D009046 8.5e-08 60.8 135 27.4
BolC7t46653H Brassica oleracea HOM05D002637 ORTHO05D009046 1.1e-07 60.5 106 35.8
VMungo1383G0183 Vigna mungo HOM05D002637 ORTHO05D009046 3.2e-07 58.9 54 51.9
EL10Ac1g02043 Beta vulgaris HOM05D002637 ORTHO05D009046 3.6e-06 55.5 53 39.6
Glyma.18G252700 Glycine max HOM05D002637 ORTHO05D009046 3.6e-06 55.5 48 52.1


User provided reference genes

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