Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.6e-202 709.1 350 100.0
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.2e-198 694.5 373 93.6
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 5.4e-198 694.1 350 98.0
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.9e-195 685.6 350 96.9
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 3.2e-190 668.3 350 95.1
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 9.3e-182 640.2 350 90.6
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.5e-179 632.9 351 89.7
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.4e-177 625.5 376 85.6
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 7.2e-166 587.4 351 82.3
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 7.7e-160 567.4 350 81.7
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 5.2e-156 554.7 352 77.3
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 1.5e-155 553.1 348 78.7
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 4.4e-155 551.6 351 78.6
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 1.3e-154 550.1 351 78.3
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 2.8e-154 548.9 352 78.4
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 6.3e-154 547.7 352 77.3
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.1e-153 547.0 351 78.6
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 1.4e-153 546.6 349 77.4
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 7.7e-152 540.8 341 78.0
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 1.7e-151 539.7 329 81.8
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 2.2e-151 539.3 352 76.1
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 2.2e-151 539.3 337 79.8
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 2.9e-151 538.9 347 77.5
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 5.0e-151 538.1 332 78.9
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 5.0e-151 538.1 332 78.9
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 5.5e-150 534.6 336 78.9
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 9.4e-150 533.9 393 71.0
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 1.2e-149 533.5 348 75.9
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 1.6e-149 533.1 352 75.9
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 1.6e-149 533.1 353 76.2
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 2.7e-149 532.3 335 77.0
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 8.0e-149 530.8 392 70.9
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 1.4e-148 530.0 336 76.8
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 3.0e-148 528.9 351 74.4
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 5.7e-147 524.6 336 76.5
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 5.7e-147 524.6 336 77.4
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 9.7e-147 523.9 337 76.6
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 9.7e-147 523.9 338 75.4
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 1.3e-146 523.5 346 76.0
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 1.7e-146 523.1 351 73.5
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 2.8e-146 522.3 352 74.4
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 2.8e-146 522.3 331 77.6
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 3.7e-146 521.9 336 75.6
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 3.7e-146 521.9 348 74.7
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 6.3e-146 521.2 340 76.2
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 6.3e-146 521.2 348 73.6
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 8.2e-146 520.8 347 75.5
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 1.8e-145 519.6 336 75.3
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 2.4e-145 519.2 339 75.8
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 4.1e-145 518.5 349 73.1
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 5.3e-145 518.1 346 74.6
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 5.3e-145 518.1 332 76.8
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 5.3e-145 518.1 352 72.4
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 9.1e-145 517.3 325 77.2
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 9.1e-145 517.3 307 81.4
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 1.6e-144 516.5 346 73.7
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 1.6e-144 516.5 349 72.8
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 2.7e-144 515.8 330 77.0
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 3.5e-144 515.4 347 74.1
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 5.9e-144 514.6 335 76.4
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 5.9e-144 514.6 311 81.0
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 2.2e-143 512.7 350 73.1
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 3.8e-143 511.9 327 75.5
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 5.0e-143 511.5 336 75.3
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 6.5e-143 511.1 346 72.8
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 8.5e-143 510.8 325 76.0
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 2.5e-142 509.2 349 73.4
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 4.2e-142 508.4 325 76.3
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 4.2e-142 508.4 337 74.5
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 7.2e-142 507.7 346 73.4
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 1.6e-141 506.5 336 74.1
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 1.0e-140 503.8 345 74.5
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 4.0e-140 501.9 319 76.5
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 6.8e-140 501.1 338 73.7
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 6.8e-140 501.1 345 74.2
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 9.1e-137 490.7 312 77.9
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 1.0e-135 487.3 373 67.0
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 1.9e-134 483.0 361 69.3
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 3.3e-134 482.3 363 68.3
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 3.3e-134 482.3 363 68.3
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 5.5e-134 481.5 344 70.3
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 1.2e-133 480.3 338 70.7
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 2.6e-131 472.6 309 75.7
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 5.7e-131 471.5 340 70.6
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 1.3e-130 470.3 303 78.2
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 4.9e-130 468.4 319 71.8
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 4.9e-130 468.4 391 61.6
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 1.4e-129 466.8 291 78.0
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 2.9e-127 459.1 284 77.8
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 1.2e-125 453.8 260 85.8
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 6.1e-125 451.4 340 67.6
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 3.0e-124 449.1 353 67.4
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 8.9e-124 447.6 275 79.3
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 1.2e-123 447.2 288 76.7
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 9.8e-123 444.1 288 75.3
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 1.7e-122 443.4 379 61.7
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 3.6e-117 425.6 283 74.2
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 4.0e-116 422.2 324 67.6
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 1.2e-115 420.6 347 62.0
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 7.0e-113 411.4 286 71.7
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 7.3e-110 401.4 319 62.7
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 1.2e-109 400.6 323 60.1
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 5.2e-108 395.2 310 65.8
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 2.6e-107 392.9 332 59.6
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 3.2e-105 386.0 298 64.4
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 1.6e-104 383.6 233 82.0
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 2.1e-104 383.3 323 59.1
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 3.9e-103 379.0 326 57.7
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 3.1e-100 369.4 286 67.5
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 6.8e-100 368.2 277 67.9
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 5.1e-95 352.1 248 70.2
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 6.6e-95 351.7 269 67.3
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 1.4e-92 344.0 324 53.7
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 1.6e-88 330.5 223 73.1
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 3.4e-83 312.8 234 65.0
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 1.9e-81 307.0 223 70.9
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 2.5e-73 280.0 366 43.2
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 2.5e-54 216.9 181 62.4
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 1.8e-52 210.7 140 76.4
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 5.9e-51 205.7 143 72.0
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 1.3e-50 204.5 326 37.7
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 7.7e-43 178.7 107 73.8
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 3.8e-42 176.4 129 66.7
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 3.6e-40 169.9 279 37.6
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.2e-32 144.8 97 73.2
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 2.7e-19 100.5 98 53.1
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 1.3e-13 81.6 69 56.5
MD02G1212000 Malus domestica HOM05D006055 ORTHO05D007480 4.9e-13 79.7 71 63.4
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 2.0e-11 74.3 50 74.0


User provided reference genes

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