Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G0844 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.3e-64 249.6 125 100.0
FAN06G4049 Fragaria x ananassa HOM05D005711 ORTHO05D007125 4.1e-63 244.6 125 98.4
FvH4_7g07943 Fragaria vesca HOM05D005711 ORTHO05D007125 5.3e-63 244.2 123 99.2
FvH4_2g02670 Fragaria vesca HOM05D005711 ORTHO05D007125 8.2e-56 220.3 126 91.3
FAN24G0778 Fragaria x ananassa HOM05D005711 ORTHO05D007125 2.6e-54 215.3 126 89.7
FAN15G2563 Fragaria x ananassa HOM05D005711 ORTHO05D007125 6.1e-51 204.1 130 85.4
FAN20G1206 Fragaria x ananassa HOM05D005711 ORTHO05D007125 3.3e-49 198.4 130 83.1
FAN27G3244 Fragaria x ananassa HOM05D005711 ORTHO05D007125 5.7e-49 197.6 130 83.1
RcHm_v2.0_Chr6g0247071 Rosa chinensis HOM05D005711 ORTHO05D007125 3.8e-45 184.9 128 78.1
RcHm_v2.0_Chr7g0177161 Rosa chinensis HOM05D005711 ORTHO05D007125 1.1e-44 183.3 128 77.3
Prupe.8G156400 Prunus persica HOM05D005711 ORTHO05D007125 1.1e-31 140.2 110 63.6
MD05G1111300 Malus domestica HOM05D005711 ORTHO05D007125 2.4e-31 139.0 110 65.5
Ciclev10004212m.g Citrus clementina HOM05D005711 ORTHO05D007125 1.9e-28 129.4 106 55.7
Atru.chr1.1044 Acer truncatum HOM05D005711 ORTHO05D007125 4.3e-28 128.3 115 54.8
Thecc.05G160700 Theobroma cacao HOM05D005711 ORTHO05D007125 1.2e-27 126.7 117 51.3
Dinv24132 Davidia involucrata HOM05D005711 ORTHO05D007125 2.1e-27 125.9 120 50.0
THA.LOC104802271 Tarenaya hassleriana HOM05D005711 ORTHO05D007125 4.7e-27 124.8 117 53.0
Dinv01671 Davidia involucrata HOM05D005711 ORTHO05D007125 8.0e-27 124.0 104 53.8
Hma1.2p1_0247F.1_g101860 Hydrangea macrophylla HOM05D005711 ORTHO05D007125 8.0e-27 124.0 109 50.5
Rhsim03G0017400 Rhododendron simsii HOM05D005711 ORTHO05D007125 8.0e-27 124.0 118 53.4
Migut.J01777 Erythranthe guttata HOM05D005711 ORTHO05D007125 1.0e-26 123.6 120 47.5
Haze_19901 Corylus avellana HOM05D005711 ORTHO05D007125 1.4e-26 123.2 115 54.8
Gohir.D01G186800 Gossypium hirsutum HOM05D005711 ORTHO05D007125 3.0e-26 122.1 117 50.4
Gorai.002G230200 Gossypium raimondii HOM05D005711 ORTHO05D007125 3.0e-26 122.1 117 49.6
Oeu018003.1 Olea europaea HOM05D005711 ORTHO05D007125 3.0e-26 122.1 99 56.6
CANSAT80G2574 Cannabis sativa HOM05D005711 ORTHO05D007125 4.0e-26 121.7 106 57.5
CiPaw.09G035700 Carya illinoinensis HOM05D005711 ORTHO05D007125 5.2e-26 121.3 99 58.6
COL.COLO4_28165 Corchorus olitorius HOM05D005711 ORTHO05D007125 5.2e-26 121.3 117 47.9
Gohir.A01G196500 Gossypium hirsutum HOM05D005711 ORTHO05D007125 5.2e-26 121.3 117 49.6
TWI53G1199 Tripterygium wilfordii HOM05D005711 ORTHO05D007125 5.2e-26 121.3 118 47.5
AL5G39150 Arabidopsis lyrata HOM05D005711 ORTHO05D007125 2.6e-25 119.0 110 54.5
GSVIVG01033319001 Vitis vinifera HOM05D005711 ORTHO05D007125 2.6e-25 119.0 106 52.8
Psat3g071760 Pisum sativum HOM05D005711 ORTHO05D007125 3.4e-25 118.6 97 55.7
SalBow6G5243 Salvia bowleyana HOM05D005711 ORTHO05D007125 4.4e-25 118.2 110 49.1
CSS0036262 Camellia sinensis var. sinensis HOM05D005711 ORTHO05D007125 7.5e-25 117.5 99 55.6
Duzib093G0922 Durio zibethinus HOM05D005711 ORTHO05D007125 9.8e-25 117.1 116 48.3
HanXRQChr13g0390691 Helianthus annuus HOM05D005711 ORTHO05D007125 9.8e-25 117.1 119 48.7
Actinidia09354 Actinidia chinensis HOM05D005711 ORTHO05D007125 1.3e-24 116.7 118 50.8
ClCG04G000850 Citrullus lanatus HOM05D005711 ORTHO05D007125 1.3e-24 116.7 122 55.7
Cc06_g17000 Coffea canephora HOM05D005711 ORTHO05D007125 1.3e-24 116.7 99 54.5
Ca_08477_v3 Cicer arietinum L. HOM05D005711 ORTHO05D007125 1.7e-24 116.3 114 49.1
Aa31LG10G12390 Aethionema arabicum HOM05D005711 ORTHO05D007125 2.2e-24 115.9 110 50.9
CARHR167800 Cardamine hirsuta HOM05D005711 ORTHO05D007125 2.9e-24 115.5 111 53.2
Sp5g05020 Schrenkiella parvula HOM05D005711 ORTHO05D007125 2.9e-24 115.5 116 49.1
vmacro22370 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 2.9e-24 115.5 129 47.3
AT3G57570 Arabidopsis thaliana HOM05D005711 ORTHO05D007125 3.7e-24 115.2 110 51.8
Cpa.g.sc92.20 Carica papaya HOM05D005711 ORTHO05D010193 3.7e-24 115.2 116 48.3
Manes.09G026800 Manihot esculenta HOM05D005711 ORTHO05D007125 1.1e-23 113.6 117 47.9
Sed0005844 Sechium edule HOM05D005711 ORTHO05D007125 1.9e-23 112.8 121 53.7
Peaxi162Scf00650g00112 Petunia axillaris HOM05D005711 ORTHO05D007125 3.2e-23 112.1 101 46.5
Thhalv10005777m.g Eutrema salsugineum HOM05D005711 ORTHO05D007125 4.1e-23 111.7 110 49.1
MSTRG.6443 Avicennia marina HOM05D005711 ORTHO05D007125 5.4e-23 111.3 121 42.1
Medtr7g092130 Medicago truncatula HOM05D005711 ORTHO05D007125 5.4e-23 111.3 102 51.0
Carub.0005s2441 Capsella rubella HOM05D005711 ORTHO05D007125 7.0e-23 110.9 110 49.1
Potri.006G054100 Populus trichocarpa HOM05D005711 ORTHO05D007125 7.0e-23 110.9 107 55.1
ECA248G2859 Erigeron canadensis HOM05D005711 ORTHO05D007125 9.2e-23 110.5 100 52.0
QL07p021385 Quercus lobata HOM05D005711 ORTHO05D007125 9.2e-23 110.5 98 53.1
SGA_v2.0_scaffold69G23097 Striga asiatica HOM05D005711 ORTHO05D007125 2.0e-22 109.4 116 46.6
Rhsim05G0135200 Rhododendron simsii HOM05D005711 ORTHO05D007125 3.5e-22 108.6 149 42.3
BraA09t40497Z Brassica rapa HOM05D005711 ORTHO05D007125 1.7e-21 106.3 116 47.4
Lj1g0025810 Lotus japonicus HOM05D005711 ORTHO05D007125 2.3e-21 105.9 99 51.5
C08p33160 Brassica napus HOM05D005711 ORTHO05D007125 3.0e-21 105.5 116 46.6
BolC8t50918H Brassica oleracea HOM05D005711 ORTHO05D007125 3.0e-21 105.5 116 46.6
MELO3C009042.2 Cucumis melo HOM05D005711 ORTHO05D007125 3.9e-21 105.1 122 51.6
VMungo1383G1829 Vigna mungo HOM05D005711 ORTHO05D007125 5.0e-21 104.8 99 53.5
TAR633G2044 Trochodendron aralioides HOM05D005711 ORTHO05D007125 6.6e-21 104.4 107 47.7
Lj2A380T68 Lonicera japonica HOM05D005711 ORTHO05D007125 8.6e-21 104.0 126 40.5
PSO782G5466 Papaver somniferum HOM05D005711 ORTHO05D007125 8.6e-21 104.0 118 44.1
CsaV3_4G031330 Cucumis sativus L. HOM05D005711 ORTHO05D007125 1.5e-20 103.2 121 51.2
Lsat_1_v5_gn_5_162580 Lactuca sativa HOM05D005711 ORTHO05D007125 1.5e-20 103.2 119 44.5
Nn7g36123 Nelumbo nucifera HOM05D005711 ORTHO05D007125 1.5e-20 103.2 96 51.0
Phvul.001G135900 Phaseolus vulgaris HOM05D005711 ORTHO05D007125 3.3e-20 102.1 99 52.5
Sc25g0005260 Simmondsia chinensis HOM05D005711 ORTHO05D007125 4.3e-20 101.7 105 45.7
AUR62026001 Chenopodium quinoa HOM05D005711 ORTHO05D007125 9.5e-20 100.5 104 45.2
Lalb_Chr20g0110821 Lupinus albus HOM05D005711 ORTHO05D007125 9.5e-20 100.5 105 49.5
AUR62024409 Chenopodium quinoa HOM05D005711 ORTHO05D007125 1.2e-19 100.1 108 44.4
A09p50460 Brassica napus HOM05D005711 ORTHO05D007125 1.6e-19 99.8 117 46.2
Ah.13g076290 Amaranthus hybridus HOM05D005711 ORTHO05D007125 1.1e-18 97.1 114 45.6
Glyma.19G141900 Glycine max HOM05D005711 ORTHO05D007125 1.8e-18 96.3 98 46.9
Cfa016851 Carpinus fangiana HOM05D005711 ORTHO05D007125 3.1e-18 95.5 80 56.2
Nitab4.5_0002510g0050 Nicotiana tabacum HOM05D005711 ORTHO05D007125 4.0e-18 95.1 106 43.4
EL10Ac3g07027 Beta vulgaris HOM05D005711 ORTHO05D007125 1.2e-17 93.6 104 45.2
DCAR_009055 Daucus carota HOM05D005711 ORTHO05D007125 2.6e-17 92.4 121 38.8
Aqoxy7G01800 Aquilegia oxysepala HOM05D005711 ORTHO05D007125 5.8e-17 91.3 107 41.1
arahy.Tifrunner.gnm1.ann1.7A57YA Arachis hypogaea HOM05D005711 ORTHO05D007125 7.5e-17 90.9 120 43.3
arahy.Tifrunner.gnm1.ann1.FZG2LY Arachis hypogaea HOM05D005711 ORTHO05D007125 7.5e-17 90.9 120 43.3
BcaC07g40362 Brassica carinata HOM05D005711 ORTHO05D007125 7.5e-17 90.9 120 41.7
Rhsim03G0016400 Rhododendron simsii HOM05D005711 ORTHO05D007125 2.1e-14 82.8 89 51.7
TPR.G3825 Trifolium pratense HOM05D005711 ORTHO05D007125 1.7e-13 79.7 60 55.0
CDE10G0401 Ceratophyllum demersum HOM05D005711 ORTHO05D007125 1.5e-12 76.6 106 38.7
ATR0605G192 Amborella trichopoda HOM05D005711 ORTHO05D007125 9.9e-09 63.9 102 33.3
Nitab4.5_0010669g0020 Nicotiana tabacum HOM05D005711 ORTHO05D007125 2.2e-08 62.8 72 40.3
PGR004G1983 Punica granatum HOM05D005711 ORTHO05D007125 1.6e-06 56.6 33 63.6


User provided reference genes

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