Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G0821 Fragaria x ananassa HOM05D004534 ORTHO05D005413 4.5e-180 634.4 307 100.0
FAN06G3998 Fragaria x ananassa HOM05D004534 ORTHO05D005413 4.0e-128 461.8 450 59.1
FAN03G3228 Fragaria x ananassa HOM05D004534 ORTHO05D005413 1.2e-111 407.1 355 64.8
FAN06G4936 Fragaria x ananassa HOM05D004534 ORTHO05D005413 6.0e-108 394.8 371 61.7
RcHm_v2.0_Chr1g0364391 Rosa chinensis HOM05D004534 ORTHO05D005413 2.0e-103 379.8 364 60.4
Prupe.2G220600 Prunus persica HOM05D004534 ORTHO05D005413 1.0e-91 340.9 354 55.4
FAN01G1783 Fragaria x ananassa HOM05D004534 ORTHO05D005413 6.2e-89 331.6 388 52.8
Haze_16951 Corylus avellana HOM05D004534 ORTHO05D005413 3.2e-85 319.3 365 51.8
FvH4_7g20500 Fragaria vesca HOM05D004534 ORTHO05D005413 5.5e-85 318.5 223 74.4
Cfa001577 Carpinus fangiana HOM05D004534 ORTHO05D005413 8.7e-83 311.2 363 50.1
GSVIVG01016358001 Vitis vinifera HOM05D004534 ORTHO05D005413 1.3e-81 307.4 352 49.7
MD07G1181700 Malus domestica HOM05D004534 ORTHO05D005413 3.1e-80 302.8 323 52.9
Dinv31374 Davidia involucrata HOM05D004534 ORTHO05D005413 4.0e-80 302.4 352 49.7
CiPaw.01G277800 Carya illinoinensis HOM05D004534 ORTHO05D005413 6.9e-80 301.6 352 50.6
Thecc.10G065400 Theobroma cacao HOM05D004534 ORTHO05D005413 1.7e-78 297.0 352 49.7
Atru.chr12.616 Acer truncatum HOM05D004534 ORTHO05D005413 1.4e-77 293.9 375 49.1
Ciclev10031838m.g Citrus clementina HOM05D004534 ORTHO05D005413 3.2e-77 292.7 358 49.2
Potri.010G216000 Populus trichocarpa HOM05D004534 ORTHO05D005413 3.2e-77 292.7 354 49.4
Actinidia03016 Actinidia chinensis HOM05D004534 ORTHO05D005413 5.5e-77 292.0 354 48.6
TWI38G2053 Tripterygium wilfordii HOM05D004534 ORTHO05D005413 9.3e-77 291.2 353 48.7
Gorai.009G315700 Gossypium raimondii HOM05D004534 ORTHO05D005413 1.6e-76 290.4 352 49.1
Gohir.D05G298500 Gossypium hirsutum HOM05D004534 ORTHO05D005413 3.0e-75 286.2 352 48.6
COL.COLO4_23775 Corchorus olitorius HOM05D004534 ORTHO05D005413 1.9e-74 283.5 352 47.7
Potri.008G045700 Populus trichocarpa HOM05D004534 ORTHO05D005413 3.3e-74 282.7 352 46.9
PGR044G2491 Punica granatum HOM05D004534 ORTHO05D005413 1.3e-73 280.8 356 48.0
Nitab4.5_0000561g0030 Nicotiana tabacum HOM05D004534 ORTHO05D005413 3.1e-72 276.2 354 48.0
CSS0028612 Camellia sinensis var. sinensis HOM05D004534 ORTHO05D005413 4.1e-72 275.8 379 44.9
MELO3C025495.2 Cucumis melo HOM05D004534 ORTHO05D005413 1.5e-71 273.9 357 45.4
Migut.F02016 Erythranthe guttata HOM05D004534 ORTHO05D005413 2.0e-71 273.5 354 46.0
ECA233G2770 Erigeron canadensis HOM05D004534 ORTHO05D000452 3.8e-70 269.2 354 45.5
EL10Ac2g03539 Beta vulgaris HOM05D004534 ORTHO05D005413 6.5e-70 268.5 360 45.3
Nn2g10612 Nelumbo nucifera HOM05D004534 ORTHO05D005413 8.5e-70 268.1 353 44.2
Lsat_1_v5_gn_8_20980 Lactuca sativa HOM05D004534 ORTHO05D005413 2.5e-69 266.5 347 45.8
Cfa011397 Carpinus fangiana HOM05D004534 ORTHO05D005413 4.2e-69 265.8 355 46.2
Sabra08G0032000 Salix brachista HOM05D004534 ORTHO05D005413 7.2e-69 265.0 323 46.7
Hma1.2p1_2042F.1_g312230 Hydrangea macrophylla HOM05D004534 ORTHO05D005413 1.6e-68 263.8 354 45.5
PSO339G4951 Papaver somniferum HOM05D004534 ORTHO05D005413 1.6e-68 263.8 354 45.2
QL01p035546 Quercus lobata HOM05D004534 ORTHO05D005413 1.6e-68 263.8 355 46.2
CsaV3_5G026040 Cucumis sativus L. HOM05D004534 ORTHO05D005413 2.7e-68 263.1 364 43.7
HanXRQChr08g0219701 Helianthus annuus HOM05D004534 ORTHO05D005413 2.7e-68 263.1 353 45.9
Cpa.g.sc139.34 Carica papaya HOM05D004534 ORTHO05D005413 1.0e-67 261.2 353 43.3
PSO384G4947 Papaver somniferum HOM05D004534 ORTHO05D005413 1.0e-67 261.2 354 45.5
Zm00001eb397220 Zea mays HOM05D004534 ORTHO05D005413 1.0e-67 261.2 352 44.3
arahy.Tifrunner.gnm1.ann1.AW7LWX Arachis hypogaea HOM05D004534 ORTHO05D005413 1.3e-67 260.8 351 43.6
Lalb_Chr24g0394391 Lupinus albus HOM05D004534 ORTHO05D005413 1.3e-67 260.8 347 44.1
TWI31G1398 Tripterygium wilfordii HOM05D004534 ORTHO05D005413 1.3e-67 260.8 355 44.5
arahy.Tifrunner.gnm1.ann1.NM19P7 Arachis hypogaea HOM05D004534 ORTHO05D005413 1.8e-67 260.4 351 43.6
Lj3g0025326 Lotus japonicus HOM05D004534 ORTHO05D005413 1.8e-67 260.4 349 45.8
GSVIVG01025090001 Vitis vinifera HOM05D004534 ORTHO05D005413 1.8e-67 260.4 353 44.8
Gohir.A05G298800 Gossypium hirsutum HOM05D004534 ORTHO05D005413 2.3e-67 260.0 300 50.7
Psat5g281360 Pisum sativum HOM05D004534 ORTHO05D005413 3.0e-67 259.6 351 44.2
Phvul.L001232 Phaseolus vulgaris HOM05D004534 ORTHO05D005413 3.9e-67 259.2 351 44.4
Sabra10G0167000 Salix brachista HOM05D004534 ORTHO05D005413 3.9e-67 259.2 361 45.4
Peaxi162Scf01024g00128 Petunia axillaris HOM05D004534 ORTHO05D005413 8.7e-67 258.1 382 44.0
TPR.G11635 Trifolium pratense HOM05D004534 ORTHO05D005413 8.7e-67 258.1 353 43.1
Dinv32819 Davidia involucrata HOM05D004534 ORTHO05D005413 1.5e-66 257.3 353 44.2
Medtr2g095830 Medicago truncatula HOM05D004534 ORTHO05D005413 1.5e-66 257.3 351 43.3
Glyma.13G330000 Glycine max HOM05D004534 ORTHO05D005413 2.5e-66 256.5 351 44.4
vmacro14490 Vaccinium macrocarpon HOM05D004534 ORTHO05D005413 3.3e-66 256.1 375 44.3
Atru.chr3.3749 Acer truncatum HOM05D004534 ORTHO05D005413 4.3e-66 255.8 355 44.5
Ciclev10030338m.g Citrus clementina HOM05D004534 ORTHO05D005413 7.4e-66 255.0 353 43.9
QL08p057247 Quercus lobata HOM05D004534 ORTHO05D005413 7.4e-66 255.0 233 58.4
Sp5g15770 Schrenkiella parvula HOM05D004534 ORTHO05D005413 7.4e-66 255.0 347 43.2
Thhalv10002577m.g Eutrema salsugineum HOM05D004534 ORTHO05D005413 9.7e-66 254.6 347 44.7
BcaC01g01956 Brassica carinata HOM05D004534 ORTHO05D005413 4.8e-65 252.3 344 44.2
A06p21280 Brassica napus HOM05D004534 ORTHO05D005413 4.8e-65 252.3 344 43.6
C03p70180 Brassica napus HOM05D004534 ORTHO05D005413 4.8e-65 252.3 344 44.2
BraA06t25216Z Brassica rapa HOM05D004534 ORTHO05D005413 4.8e-65 252.3 344 43.6
Os03g0284500 Oryza sativa ssp. japonica HOM05D004534 ORTHO05D005413 4.8e-65 252.3 351 41.9
BolC3t19273H Brassica oleracea HOM05D004534 ORTHO05D005413 1.1e-64 251.1 344 43.9
PGR102G1844 Punica granatum HOM05D004534 ORTHO05D005413 1.4e-64 250.8 348 44.3
VMungo1080G0465 Vigna mungo HOM05D004534 ORTHO05D005413 1.4e-64 250.8 351 43.0
ATR0582G124 Amborella trichopoda HOM05D004534 ORTHO05D005413 1.8e-64 250.4 351 43.0
CARHR149920 Cardamine hirsuta HOM05D004534 ORTHO05D005413 3.1e-64 249.6 349 43.8
TAR633G1279 Trochodendron aralioides HOM05D004534 ORTHO05D005413 3.1e-64 249.6 223 57.8
Oeu055059.2 Olea europaea HOM05D004534 ORTHO05D005413 4.1e-64 249.2 293 49.8
Manes.11G138500 Manihot esculenta HOM05D004534 ORTHO05D005413 5.3e-64 248.8 353 43.1
Sed0013966 Sechium edule HOM05D004534 ORTHO05D005413 5.3e-64 248.8 350 42.6
BcaB01g01071 Brassica carinata HOM05D004534 ORTHO05D005413 1.2e-63 247.7 347 43.2
MD11G1120100 Malus domestica HOM05D004534 ORTHO05D005413 1.2e-63 247.7 353 43.9
THA.LOC104814850 Tarenaya hassleriana HOM05D004534 ORTHO05D005413 1.2e-63 247.7 356 42.7
HPP92_003600 Vanilla planifolia HOM05D004534 ORTHO05D005413 1.2e-63 247.7 351 42.7
Ca_01369_v3 Cicer arietinum L. HOM05D004534 ORTHO05D005413 1.5e-63 247.3 320 44.7
CSS0009646 Camellia sinensis var. sinensis HOM05D004534 ORTHO05D005413 2.0e-63 246.9 352 44.0
MELO3C026849.2 Cucumis melo HOM05D004534 ORTHO05D005413 2.0e-63 246.9 350 42.6
CDE04G1344 Ceratophyllum demersum HOM05D004534 ORTHO05D005413 2.6e-63 246.5 355 42.5
Peaxi162Scf00072g00025 Petunia axillaris HOM05D004534 ORTHO05D005413 4.5e-63 245.7 349 43.0
CANSAT54G1456 Cannabis sativa HOM05D004534 ORTHO05D005413 5.9e-63 245.4 354 41.2
AT3G45740 Arabidopsis thaliana HOM05D004534 ORTHO05D005413 7.7e-63 245.0 346 43.1
MSTRG.18620 Avicennia marina HOM05D004534 ORTHO05D005413 7.7e-63 245.0 347 42.7
Solyc06g075540.3 Solanum lycopersicum HOM05D004534 ORTHO05D005413 7.7e-63 245.0 349 43.6
Thecc.09G335300 Theobroma cacao HOM05D004534 ORTHO05D005413 1.0e-62 244.6 350 43.1
CsaV3_1G012750 Cucumis sativus L. HOM05D004534 ORTHO05D005413 1.7e-62 243.8 350 42.0
FvH4_3g34110 Fragaria vesca HOM05D004534 ORTHO05D005413 1.7e-62 243.8 355 41.1
Lj1A926G31 Lonicera japonica HOM05D004534 ORTHO05D005413 1.7e-62 243.8 227 58.6
CAN.G394.3 Capsicum annuum HOM05D004534 ORTHO05D005413 2.2e-62 243.4 350 42.6
RcHm_v2.0_Chr5g0061761 Rosa chinensis HOM05D004534 ORTHO05D005413 2.2e-62 243.4 353 41.9
Rhsim01G0222900 Rhododendron simsii HOM05D004534 ORTHO05D005413 2.9e-62 243.0 354 43.5
AL5G24380 Arabidopsis lyrata HOM05D004534 ORTHO05D005413 3.8e-62 242.7 346 43.4
Gohir.A08G000096 Gossypium hirsutum HOM05D004534 ORTHO05D005413 3.8e-62 242.7 355 43.1
PGSC0003DMG402006611 Solanum tuberosum HOM05D004534 ORTHO05D005413 3.8e-62 242.7 349 43.3
Aa31LG4G14970 Aethionema arabicum HOM05D004534 ORTHO05D005413 5.0e-62 242.3 347 42.7
DCAR_018857 Daucus carota HOM05D004534 ORTHO05D005413 5.0e-62 242.3 353 41.9
Gohir.D08G009000 Gossypium hirsutum HOM05D004534 ORTHO05D005413 5.0e-62 242.3 355 43.1
FAN11G3381 Fragaria x ananassa HOM05D004534 ORTHO05D005413 8.5e-62 241.5 355 40.8
Nitab4.5_0004774g0020 Nicotiana tabacum HOM05D004534 ORTHO05D005413 1.9e-61 240.4 349 42.4
Nitab4.5_0000270g0130 Nicotiana tabacum HOM05D004534 ORTHO05D005413 2.5e-61 240.0 351 42.7
Aqoxy4G03153 Aquilegia oxysepala HOM05D004534 ORTHO05D005413 4.2e-61 239.2 354 42.1
Oeu051854.2 Olea europaea HOM05D004534 ORTHO05D005413 5.5e-61 238.8 358 42.5
FAN21G3213 Fragaria x ananassa HOM05D004534 ORTHO05D005413 6.1e-60 235.3 366 39.6
Hund18962 Selenicereus undatus HOM05D004534 ORTHO05D005413 1.8e-59 233.8 350 41.4
EL10Ac7g15886 Beta vulgaris HOM05D004534 ORTHO05D005413 8.8e-59 231.5 372 39.5
Ciclev10032311m.g Citrus clementina HOM05D004534 ORTHO05D005413 1.1e-58 231.1 301 46.8
Migut.D02166 Erythranthe guttata HOM05D004534 ORTHO05D005413 3.3e-58 229.6 344 42.7
Gorai.004G002200 Gossypium raimondii HOM05D004534 ORTHO05D005413 2.2e-57 226.9 302 44.7
CSS0050279 Camellia sinensis var. sinensis HOM05D004534 ORTHO05D005413 6.3e-57 225.3 336 43.5
ClCG09G020370 Citrullus lanatus HOM05D004534 ORTHO05D005413 1.8e-56 223.8 259 48.3
Cc01_g11880 Coffea canephora HOM05D004534 ORTHO05D005413 1.8e-56 223.8 351 40.5
CiPaw.13G104100 Carya illinoinensis HOM05D004534 ORTHO05D005413 1.5e-55 220.7 223 54.7
unitig_37.g12680 Utricularia gibba HOM05D004534 ORTHO05D005413 1.5e-55 220.7 349 39.0
Lj1A180G32 Lonicera japonica HOM05D004534 ORTHO05D005413 2.0e-55 220.3 349 41.3
Ah.10g033090 Amaranthus hybridus HOM05D004534 ORTHO05D005413 1.7e-54 217.2 358 40.2
AUR62009701 Chenopodium quinoa HOM05D004534 ORTHO05D005413 2.2e-54 216.9 349 39.0
Sc06g0008140 Simmondsia chinensis HOM05D004534 ORTHO05D005413 3.8e-54 216.1 296 43.6
Duzib106G1068 Durio zibethinus HOM05D004534 ORTHO05D005413 5.5e-53 212.2 352 40.6
COL.COLO4_18394 Corchorus olitorius HOM05D004534 ORTHO05D005413 6.1e-52 208.8 290 43.1
Nitab4.5_0000830g0040 Nicotiana tabacum HOM05D004534 ORTHO05D005413 1.0e-51 208.0 354 40.7
Manes.10G040600 Manihot esculenta HOM05D004534 ORTHO05D005413 3.9e-51 206.1 364 39.6
Prupe.6G090300 Prunus persica HOM05D004534 ORTHO05D005413 1.1e-50 204.5 223 51.1
AUR62036013 Chenopodium quinoa HOM05D004534 ORTHO05D005413 9.7e-50 201.4 357 38.4
FAN25G2491 Fragaria x ananassa HOM05D004534 ORTHO05D005413 4.8e-49 199.1 376 35.4
Carub.0005s1159 Capsella rubella HOM05D004534 ORTHO05D005413 1.4e-48 197.6 276 43.1
Sed0004393 Sechium edule HOM05D004534 ORTHO05D005413 7.7e-47 191.8 306 40.5
SGA_v2.0_scaffold61G21215 Striga asiatica HOM05D004534 ORTHO05D005413 1.0e-46 191.4 280 42.1
MBI18_g24932_MAGBIO Magnolia biondii HOM05D004534 ORTHO05D005413 2.7e-44 183.3 458 31.4
FAN16G0790 Fragaria x ananassa HOM05D004534 ORTHO05D005413 8.8e-43 178.3 379 32.7
AUR62036245 Chenopodium quinoa HOM05D004534 ORTHO05D005413 2.2e-41 173.7 351 35.0
SMO118G0317 Selaginella moellendorffii HOM05D004534 ORTHO05D005413 1.0e-38 164.9 341 33.7
AagrBONN_evm.TU.Sc2ySwM_228.5090 Anthoceros agrestis HOM05D004534 ORTHO05D005413 2.5e-37 160.2 223 39.9
Mapoly0029s0123 Marchantia polymorpha HOM05D004534 ORTHO05D005413 7.2e-37 158.7 349 33.0
Cc09_g02390 Coffea canephora HOM05D004534 ORTHO05D005413 1.6e-36 157.5 235 43.0
Sopen06g031920 Solanum pennellii HOM05D004534 ORTHO05D005413 2.2e-33 147.1 225 41.3
Pp3c16_8740 Physcomitrium patens HOM05D004534 ORTHO05D005413 3.7e-33 146.4 361 31.3
Cpa.g.sc1.278 Carica papaya HOM05D004534 ORTHO05D005413 4.7e-28 129.4 259 35.5
VMungo0464G2039 Vigna mungo HOM05D004534 ORTHO05D005413 3.4e-26 123.2 112 54.5
CBR_g24062 Chara braunii HOM05D004534 ORTHO05D005413 3.7e-25 119.8 254 30.7
Glyma.15G044000 Glycine max HOM05D004534 ORTHO05D005413 3.5e-23 113.2 81 65.4
RcHm_v2.0_Chr1g0364361 Rosa chinensis HOM05D003391 ORTHO05D005413 1.7e-22 110.9 71 76.1
Nitab4.5_0000830g0060 Nicotiana tabacum HOM05D004534 ORTHO05D005413 2.1e-20 104.0 119 51.3
PRCOL_00005152 Prasinoderma coloniale HOM05D004534 ORTHO05D005413 6.6e-14 82.4 287 25.8
Cc09_g02400 Coffea canephora HOM05D004534 ORTHO05D005413 2.1e-12 77.4 88 50.0
Cfa024137 Carpinus fangiana HOM05D004534 ORTHO05D005413 4.7e-12 76.3 301 24.6
Actinidia38238 Actinidia chinensis HOM05D004534 ORTHO05D005413 4.1e-08 63.2 153 32.7
Nitab4.5_0000830g0070 Nicotiana tabacum HOM05D004534 ORTHO05D005413 2.0e-07 60.8 68 51.5
CAN.G829.5 Capsicum annuum HOM05D004534 ORTHO05D005706 4.6e-07 59.7 76 42.1
AUR62035991 Chenopodium quinoa HOM05D004534 ORTHO05D005413 5.0e-06 56.2 113 34.5


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