Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G0723 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.4e-60 236.1 122 100.0
FAN10G2335 Fragaria x ananassa HOM05D001099 ORTHO05D000958 3.5e-59 231.5 120 99.2
FAN03G0031 Fragaria x ananassa HOM05D001099 ORTHO05D000958 8.4e-21 104.0 169 47.9
FAN03G1450 Fragaria x ananassa HOM05D001099 ORTHO05D000958 8.4e-21 104.0 169 47.9
FAN10G3023 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.1e-20 103.6 169 47.9
FAN10G3756 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.4e-20 103.2 169 47.9
FvH4_7g32800 Fragaria vesca HOM05D001099 ORTHO05D000958 9.3e-20 100.5 169 47.3
FAN01G1585 Fragaria x ananassa HOM05D001099 ORTHO05D000958 9.3e-20 100.5 169 47.3
RcHm_v2.0_Chr1g0382761 Rosa chinensis HOM05D001099 ORTHO05D000958 6.0e-19 97.8 167 46.7
FAN05G3142 Fragaria x ananassa HOM05D001099 ORTHO05D000958 7.9e-19 97.4 106 62.3
FAN01G0396 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.2e-14 83.6 66 69.7
vmacro06431 Vaccinium macrocarpon HOM05D001099 ORTHO05D000958 5.4e-12 74.7 140 39.3
MSTRG.26985 Avicennia marina HOM05D001099 ORTHO05D000958 1.8e-10 69.7 43 81.4
FvH4_7g19240 Fragaria vesca HOM05D001099 ORTHO05D000958 6.7e-10 67.8 66 59.1
MD01G1227600 Malus domestica HOM05D001099 ORTHO05D000958 1.5e-09 66.6 44 75.0
MD07G1298000 Malus domestica HOM05D001099 ORTHO05D000958 1.5e-09 66.6 44 75.0
FAN10G1801 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.9e-09 66.2 148 42.6
EL10Ac3g05195 Beta vulgaris HOM05D001099 ORTHO05D000958 2.5e-09 65.9 44 70.5
Sc13g0010200 Simmondsia chinensis HOM05D001099 ORTHO05D000958 2.5e-09 65.9 44 77.3
GSVIVG01038631001 Vitis vinifera HOM05D001099 ORTHO05D000958 2.5e-09 65.9 44 72.7
Actinidia34260 Actinidia chinensis HOM05D001099 ORTHO05D000958 4.3e-09 65.1 44 72.7
Peaxi162Scf00300g00829 Petunia axillaris HOM05D001099 ORTHO05D000958 5.6e-09 64.7 45 75.6
Nitab4.5_0006389g0020 Nicotiana tabacum HOM05D001099 ORTHO05D000958 9.6e-09 63.9 61 59.0
MSTRG.8615 Avicennia marina HOM05D001099 ORTHO05D000958 1.3e-08 63.5 43 74.4
Rhsim03G0214500 Rhododendron simsii HOM05D001099 ORTHO05D000958 1.3e-08 63.5 44 70.5
Duzib205G1413 Durio zibethinus HOM05D001099 ORTHO05D000958 1.6e-08 63.2 44 68.2
Potri.012G022400 Populus trichocarpa HOM05D001099 ORTHO05D000958 1.6e-08 63.2 44 70.5
Sabra05G0140300 Salix brachista HOM05D001099 ORTHO05D000958 1.6e-08 63.2 43 72.1
Sabra12G0011400 Salix brachista HOM05D001099 ORTHO05D000958 1.6e-08 63.2 43 72.1
CSS0020189 Camellia sinensis var. sinensis HOM05D001099 ORTHO05D000958 2.1e-08 62.8 44 68.2
CSS0036209 Camellia sinensis var. sinensis HOM05D001099 ORTHO05D000958 2.1e-08 62.8 44 68.2
Nitab4.5_0000319g0220 Nicotiana tabacum HOM05D001099 ORTHO05D000958 2.1e-08 62.8 43 72.1
Hund09705 Selenicereus undatus HOM05D001099 ORTHO05D000958 2.8e-08 62.4 44 72.7
Eucgr.K00423 Eucalyptus grandis HOM05D001099 ORTHO05D000958 3.7e-08 62.0 43 69.8
Eucgr.L02980 Eucalyptus grandis HOM05D001099 ORTHO05D000958 3.7e-08 62.0 43 69.8
Prupe.2G317700 Prunus persica HOM05D001099 ORTHO05D000958 3.7e-08 62.0 165 37.0
THA.LOC104811889 Tarenaya hassleriana HOM05D001099 ORTHO05D000958 3.7e-08 62.0 44 70.5
Atru.chr12.2398 Acer truncatum HOM05D001099 ORTHO05D000958 4.8e-08 61.6 43 69.8
BcaC09g50550 Brassica carinata HOM05D001099 ORTHO05D000958 6.2e-08 61.2 42 71.4
A01p19110 Brassica napus HOM05D001099 ORTHO05D000958 6.2e-08 61.2 42 71.4
C01p24030 Brassica napus HOM05D001099 ORTHO05D000958 6.2e-08 61.2 42 71.4
BolC1t02359H Brassica oleracea HOM05D001099 ORTHO05D000958 6.2e-08 61.2 42 71.4
BraA01t01853Z Brassica rapa HOM05D001099 ORTHO05D000958 6.2e-08 61.2 42 71.4
CARHR235400 Cardamine hirsuta HOM05D001099 ORTHO05D000958 6.2e-08 61.2 42 71.4
FAN09G3490 Fragaria x ananassa HOM05D001099 ORTHO05D000958 6.2e-08 61.2 145 38.6
PGSC0003DMG400003219 Solanum tuberosum HOM05D001099 ORTHO05D000958 6.2e-08 61.2 43 72.1
AT4G27670 Arabidopsis thaliana HOM05D001099 ORTHO05D000958 8.1e-08 60.8 112 39.3
Cc02_g00910 Coffea canephora HOM05D001099 ORTHO05D000958 8.1e-08 60.8 44 70.5
Ciclev10022024m.g Citrus clementina HOM05D001099 ORTHO05D000958 1.1e-07 60.5 131 38.9
COL.COLO4_14358 Corchorus olitorius HOM05D001099 ORTHO05D000958 1.1e-07 60.5 44 65.9
Thecc.03G207300 Theobroma cacao HOM05D001099 ORTHO05D000958 1.1e-07 60.5 131 35.1
Ah.07g204810 Amaranthus hybridus HOM05D001099 ORTHO05D000958 1.4e-07 60.1 43 69.8
AUR62035610 Chenopodium quinoa HOM05D001099 ORTHO05D000958 1.4e-07 60.1 44 68.2
Sp7g25650 Schrenkiella parvula HOM05D001099 ORTHO05D000958 1.4e-07 60.1 62 54.8
Solyc03g082420.3 Solanum lycopersicum HOM05D001099 ORTHO05D000958 1.4e-07 60.1 43 69.8
Sopen03g022140 Solanum pennellii HOM05D001099 ORTHO05D000958 1.4e-07 60.1 43 69.8
Dinv29220 Davidia involucrata HOM05D001099 ORTHO05D000958 1.8e-07 59.7 38 76.3
Gorai.004G124600 Gossypium raimondii HOM05D001099 ORTHO05D000958 1.8e-07 59.7 113 39.8
arahy.Tifrunner.gnm1.ann1.6K80GF Arachis hypogaea HOM05D001099 ORTHO05D000958 3.1e-07 58.9 44 65.9
CAN.G303.8 Capsicum annuum HOM05D001099 ORTHO05D000958 3.1e-07 58.9 62 61.3
Thhalv10026184m.g Eutrema salsugineum HOM05D001099 ORTHO05D000958 4.0e-07 58.5 42 66.7
Lj1A1027T36 Lonicera japonica HOM05D001099 ORTHO05D000958 4.0e-07 58.5 63 55.6
PGR142G4429 Punica granatum HOM05D001099 ORTHO05D000958 4.0e-07 58.5 39 69.2
QL09p007324 Quercus lobata HOM05D001099 ORTHO05D000958 4.0e-07 58.5 117 39.3
Carub.0007s1315 Capsella rubella HOM05D001099 ORTHO05D000958 5.3e-07 58.2 112 37.5
AUR62006016 Chenopodium quinoa HOM05D001099 ORTHO05D000958 5.3e-07 58.2 44 65.9
Gohir.D12G247450 Gossypium hirsutum HOM05D001099 ORTHO05D000958 5.3e-07 58.2 43 62.8
Gorai.008G265500 Gossypium raimondii HOM05D001099 ORTHO05D000958 5.3e-07 58.2 43 62.8
Manes.01G042200 Manihot esculenta HOM05D001099 ORTHO05D000958 6.9e-07 57.8 44 63.6
Oeu023682.1 Olea europaea HOM05D001099 ORTHO05D000958 6.9e-07 57.8 43 65.1
Aqoxy5G04287 Aquilegia oxysepala HOM05D001099 ORTHO05D000958 1.2e-06 57.0 42 66.7
CiPaw.05G203400 Carya illinoinensis HOM05D001099 ORTHO05D000958 1.2e-06 57.0 56 55.4
FAN02G3786 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.2e-06 57.0 124 42.7
Gohir.D08G115600 Gossypium hirsutum HOM05D001099 ORTHO05D000958 1.2e-06 57.0 123 37.4
Cpa.g.sc3.147 Carica papaya HOM05D001099 ORTHO05D000958 1.5e-06 56.6 35 74.3
Duzib068G0845 Durio zibethinus HOM05D001099 ORTHO05D000958 1.5e-06 56.6 133 35.3
FAN01G0971 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.5e-06 56.6 35 82.9
Gohir.A08G104100 Gossypium hirsutum HOM05D001099 ORTHO05D000958 1.5e-06 56.6 125 37.6
Medtr3g092460 Medicago truncatula HOM05D001099 ORTHO05D000958 1.5e-06 56.6 43 62.8
HPP92_022253 Vanilla planifolia HOM05D001099 ORTHO05D000958 1.5e-06 56.6 45 60.0
FAN03G0999 Fragaria x ananassa HOM05D001099 ORTHO05D000958 2.0e-06 56.2 36 80.6
Hund21047 Selenicereus undatus HOM05D001099 ORTHO05D000958 2.0e-06 56.2 41 63.4
TPR.G28973 Trifolium pratense HOM05D001099 ORTHO05D000958 2.0e-06 56.2 43 62.8
Ca_16765_v3 Cicer arietinum L. HOM05D001099 ORTHO05D000958 2.6e-06 55.8 43 60.5
FAN04G3139 Fragaria x ananassa HOM05D001099 ORTHO05D000958 2.6e-06 55.8 44 65.9
Hma1.2p1_0094F.1_g047280 Hydrangea macrophylla HOM05D001099 ORTHO05D000958 3.4e-06 55.5 43 65.1
Hma1.2p1_0415F.1_g148130 Hydrangea macrophylla HOM05D001099 ORTHO05D000958 3.4e-06 55.5 44 61.4
Actinidia28278 Actinidia chinensis HOM05D001099 ORTHO05D000958 4.5e-06 55.1 43 62.8
FAN06G0318 Fragaria x ananassa HOM05D001099 ORTHO05D000958 4.5e-06 55.1 33 84.8
FAN08G1760 Fragaria x ananassa HOM05D001099 ORTHO05D000958 4.5e-06 55.1 44 65.9
Os03g0245800 Oryza sativa ssp. japonica HOM05D001099 ORTHO05D000958 4.5e-06 55.1 45 60.0
Potri.015G005801 Populus trichocarpa HOM05D001099 ORTHO05D000958 4.5e-06 55.1 44 63.6
SalBow6G6877 Salvia bowleyana HOM05D001099 ORTHO05D000958 4.5e-06 55.1 52 53.8
TWI39G0534 Tripterygium wilfordii HOM05D001099 ORTHO05D000958 4.5e-06 55.1 43 62.8
arahy.Tifrunner.gnm1.ann1.QR3Y2J Arachis hypogaea HOM05D001099 ORTHO05D000958 5.8e-06 54.7 44 61.4
FvH4_7g29410 Fragaria vesca HOM05D000001 ORTHO05D011341 5.8e-06 54.7 120 38.3
MBI12_g16190_MAGBIO Magnolia biondii HOM05D001099 ORTHO05D000958 7.6e-06 54.3 42 69.0
VMungo1309G2540 Vigna mungo HOM05D001099 ORTHO05D000958 7.6e-06 54.3 41 63.4
SEGI_20528 Sequoiadendron giganteum HOM05D001099 ORTHO05D000958 1.0e-05 53.9 40 72.5


User provided reference genes

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