Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.6e-95 352.1 177 100.0
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.4e-93 345.5 177 98.3
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 8.9e-80 300.4 221 73.8
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.7e-75 286.2 243 66.7
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 5.6e-74 281.2 215 72.6
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.2e-70 269.2 268 60.1
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.1e-57 226.1 166 73.5
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 3.6e-57 225.3 230 59.1
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 1.1e-56 223.8 193 65.8
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 8.6e-51 204.1 230 53.9
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 3.6e-49 198.7 233 52.8
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 4.2e-45 185.3 227 50.2
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 4.3e-42 175.3 219 49.3
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 1.3e-41 173.7 185 53.5
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 1.6e-41 173.3 202 51.5
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 2.8e-41 172.6 203 49.8
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 2.8e-41 172.6 185 52.4
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 3.6e-41 172.2 183 53.6
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 4.8e-41 171.8 186 53.2
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 6.2e-41 171.4 184 52.7
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 1.1e-40 170.6 186 53.2
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 1.1e-40 170.6 185 52.4
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 1.1e-40 170.6 203 51.7
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 1.4e-40 170.2 196 52.0
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 1.4e-40 170.2 215 48.4
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 1.8e-40 169.9 185 52.4
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 2.4e-40 169.5 210 50.5
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 2.4e-40 169.5 184 52.7
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 3.1e-40 169.1 231 46.8
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 5.3e-40 168.3 202 51.5
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 6.9e-40 167.9 183 53.0
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 1.2e-39 167.2 208 47.6
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 1.2e-39 167.2 190 49.5
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.2e-39 167.2 162 61.1
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.2e-39 167.2 182 52.2
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 2.6e-39 166.0 207 46.9
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 2.6e-39 166.0 184 52.2
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 2.6e-39 166.0 186 52.7
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.6e-39 166.0 183 52.5
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 3.4e-39 165.6 181 53.6
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 3.4e-39 165.6 184 51.6
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 5.8e-39 164.9 184 51.1
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 5.8e-39 164.9 180 52.8
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 1.3e-38 163.7 190 53.2
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 1.3e-38 163.7 226 43.8
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 1.7e-38 163.3 183 51.4
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 1.7e-38 163.3 185 51.9
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 1.7e-38 163.3 186 51.1
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 1.7e-38 163.3 184 54.3
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 2.2e-38 162.9 183 51.9
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 2.9e-38 162.5 183 50.8
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 2.9e-38 162.5 183 51.4
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 2.9e-38 162.5 215 47.4
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 3.8e-38 162.2 181 51.9
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 3.8e-38 162.2 182 51.1
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 3.8e-38 162.2 183 51.4
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 4.9e-38 161.8 183 50.8
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 6.4e-38 161.4 221 45.7
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 1.1e-37 160.6 181 50.3
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 2.4e-37 159.5 182 51.1
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 2.4e-37 159.5 181 51.4
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 2.4e-37 159.5 182 51.1
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 3.2e-37 159.1 182 50.5
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 5.4e-37 158.3 176 51.7
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 5.4e-37 158.3 183 49.7
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 5.4e-37 158.3 181 49.2
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 9.3e-37 157.5 185 50.8
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 9.3e-37 157.5 190 47.9
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 2.7e-36 156.0 196 49.0
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 4.6e-36 155.2 184 50.0
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 1.0e-35 154.1 190 46.3
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 1.0e-35 154.1 183 49.2
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 1.3e-35 153.7 186 46.2
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.7e-35 153.3 183 47.0
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 5.1e-35 151.8 203 44.8
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 5.1e-35 151.8 196 47.4
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 7.3e-34 147.9 218 42.7
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 1.3e-33 147.1 90 81.1
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 1.1e-32 144.1 182 46.2
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 5.3e-32 141.7 84 84.5
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 2.0e-31 139.8 84 84.5
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.6e-31 139.4 242 39.7
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 4.5e-31 138.7 84 81.0
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 4.5e-31 138.7 84 81.0
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 1.3e-30 137.1 167 48.5
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 2.2e-30 136.3 84 81.0
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 1.1e-29 134.0 90 75.6
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 3.2e-29 132.5 186 44.6
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 5.4e-29 131.7 84 77.4
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 7.1e-29 131.3 207 41.1
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 3.5e-28 129.0 81 80.2
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 4.6e-28 128.6 83 75.9
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 6.0e-28 128.3 81 76.5
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 2.3e-27 126.3 81 74.1
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 8.7e-27 124.4 182 39.6
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 8.7e-27 124.4 81 75.3
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 5.3e-24 115.2 81 70.4
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 9.0e-24 114.4 181 38.7
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 3.4e-23 112.5 159 46.5
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 1.3e-22 110.5 84 63.1
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 2.5e-21 106.3 157 38.9
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 7.1e-21 104.8 145 44.8
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 4.1e-16 89.0 55 81.8
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 2.9e-14 82.8 51 76.5
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 3.5e-12 75.9 133 39.8
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 8.7e-11 71.2 104 43.3
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 3.7e-09 65.9 45 73.3
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 8.2e-09 64.7 75 48.0
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 2.2e-06 56.6 116 34.5
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 5.0e-06 55.5 107 36.4


User provided reference genes

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