Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 6.8e-182 640.6 332 100.0
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 1.5e-181 639.4 332 99.7
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 7.5e-181 637.1 332 99.4
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 1.2e-175 619.8 327 97.6
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 1.0e-169 600.1 332 93.7
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 2.3e-166 589.0 332 90.7
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 2.0e-165 585.9 329 91.2
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 1.7e-164 582.8 332 90.1
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 2.9e-164 582.0 327 89.9
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 3.7e-164 581.6 332 89.8
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 3.7e-164 581.6 327 90.8
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 4.9e-164 581.3 335 89.0
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 1.1e-163 580.1 332 91.3
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 1.4e-163 579.7 330 89.1
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 2.4e-163 578.9 329 89.4
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 4.1e-163 578.2 329 90.0
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 4.1e-163 578.2 327 89.3
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 4.1e-163 578.2 325 90.2
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 9.2e-163 577.0 332 88.9
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.6e-162 576.2 335 89.6
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.6e-162 576.2 335 89.6
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 2.0e-162 575.9 327 89.3
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 6.0e-162 574.3 329 88.4
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.0e-161 573.5 329 89.7
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 2.3e-161 572.4 332 88.3
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 3.9e-161 571.6 329 89.4
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 1.1e-160 570.1 328 88.4
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 1.5e-160 569.7 327 87.8
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 9.5e-160 567.0 331 88.5
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 1.2e-159 566.6 332 88.0
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 2.1e-159 565.8 332 85.8
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 3.6e-159 565.1 332 85.5
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 4.7e-159 564.7 332 85.5
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 6.2e-159 564.3 332 87.3
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 1.4e-158 563.1 332 87.0
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 1.8e-158 562.8 332 87.0
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 2.3e-158 562.4 332 87.3
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 8.9e-158 560.5 327 86.5
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 1.2e-157 560.1 332 84.9
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 1.5e-157 559.7 338 86.4
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.5e-157 559.7 332 85.5
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.6e-157 558.9 331 87.3
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 3.4e-157 558.5 327 85.9
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 3.4e-157 558.5 327 85.9
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 3.4e-157 558.5 327 87.5
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 3.4e-157 558.5 332 84.6
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 4.4e-157 558.1 332 84.9
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 4.4e-157 558.1 327 87.8
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 4.4e-157 558.1 331 87.3
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 4.4e-157 558.1 332 84.6
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 5.8e-157 557.8 332 84.6
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 5.8e-157 557.8 332 85.8
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 5.8e-157 557.8 327 85.9
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 7.5e-157 557.4 327 85.6
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 7.5e-157 557.4 332 86.4
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 7.5e-157 557.4 332 86.4
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 9.9e-157 557.0 332 84.0
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 1.3e-156 556.6 329 86.6
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 1.3e-156 556.6 329 86.6
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 2.2e-156 555.8 327 84.7
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 2.2e-156 555.8 329 86.3
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 2.9e-156 555.4 329 86.3
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 2.9e-156 555.4 332 85.2
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 3.7e-156 555.1 329 86.3
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 3.7e-156 555.1 329 86.3
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 3.7e-156 555.1 329 86.3
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 3.7e-156 555.1 329 86.3
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 3.7e-156 555.1 329 86.3
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 4.9e-156 554.7 331 86.1
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 8.3e-156 553.9 332 83.7
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 1.1e-155 553.5 329 86.0
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 1.4e-155 553.1 325 85.8
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 1.9e-155 552.7 329 85.7
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 1.9e-155 552.7 325 87.1
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 2.4e-155 552.4 327 84.1
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 3.2e-155 552.0 373 79.9
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 3.2e-155 552.0 333 83.8
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 4.1e-155 551.6 328 83.8
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 4.1e-155 551.6 327 84.1
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 7.1e-155 550.8 359 79.4
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 1.2e-154 550.1 326 85.0
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 2.1e-154 549.3 333 83.8
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 3.5e-154 548.5 327 85.0
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 3.5e-154 548.5 386 76.2
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 4.6e-154 548.1 328 86.3
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 1.7e-153 546.2 328 83.5
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 2.3e-153 545.8 332 85.2
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 2.1e-151 539.3 455 66.4
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 2.8e-151 538.9 327 83.2
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 1.4e-150 536.6 331 82.5
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.4e-150 536.6 314 86.6
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 4.0e-150 535.0 331 82.2
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 5.2e-150 534.6 325 84.3
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 8.9e-150 533.9 329 83.6
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 2.2e-148 529.3 331 83.7
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 8.4e-148 527.3 332 85.5
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 1.1e-147 526.9 330 83.6
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.3e-145 519.2 304 86.5
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 2.8e-143 512.3 327 79.8
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 1.8e-142 509.6 328 80.2
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.6e-141 505.8 377 74.0
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 2.6e-141 505.8 327 81.0
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 6.4e-140 501.1 300 83.3
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 6.6e-137 491.1 330 76.1
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 2.5e-136 489.2 327 75.2
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.6e-135 486.5 302 83.1
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 2.8e-135 485.7 332 78.0
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 9.3e-131 470.7 326 73.3
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 7.9e-130 467.6 326 75.5
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 7.9e-130 467.6 328 75.3
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 5.3e-126 454.9 333 73.6
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 9.0e-126 454.1 279 82.1
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 4.2e-115 418.7 323 70.0
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 4.3e-112 408.7 324 61.4
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 1.1e-110 404.1 234 88.0
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 7.6e-109 397.9 331 62.5
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 1.7e-108 396.7 318 62.6
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.3e-105 386.3 233 82.8
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 1.5e-104 383.6 274 74.5
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 3.3e-104 382.5 315 66.7
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 7.2e-99 364.8 332 66.6
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 5.9e-93 345.1 197 90.9
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 2.5e-91 339.7 335 60.3
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 1.5e-88 330.5 235 69.8
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 7.4e-88 328.2 224 75.4
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 2.4e-86 323.2 220 80.0
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 1.3e-84 317.4 220 78.2
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 1.5e-80 303.9 220 76.8
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 2.4e-78 296.6 167 87.4
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 3.6e-74 282.7 333 45.9
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 3.0e-73 279.6 164 87.8
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.2e-69 267.7 164 81.1
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 1.6e-69 267.3 329 52.3
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 1.6e-66 257.3 266 57.1
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 6.1e-66 255.4 135 94.1
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 6.6e-60 235.3 135 91.1
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.7e-47 194.1 103 93.2
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 2.3e-44 183.7 161 64.0
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 4.7e-42 176.0 147 63.3
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 1.2e-40 171.4 92 96.7
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 7.8e-37 158.7 181 53.0
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 2.3e-36 157.1 103 79.6
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 2.3e-36 157.1 87 89.7
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 2.6e-32 143.7 88 79.5
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 2.6e-32 143.7 77 93.5
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 1.3e-31 141.4 91 82.4
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 3.8e-31 139.8 69 94.2
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 3.5e-29 133.3 110 63.6
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 1.7e-28 131.0 74 86.5
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 3.9e-28 129.8 72 87.5
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 1.4e-25 121.3 67 95.5
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 4.0e-25 119.8 75 77.3
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 1.5e-24 117.9 151 47.7
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 4.4e-24 116.3 69 85.5
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 2.1e-21 107.5 65 86.2
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 4.8e-10 69.7 85 51.8
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 4.5e-08 63.2 34 85.3
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 5.8e-08 62.8 33 87.9


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