Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G0476 Fragaria x ananassa HOM05D004948 ORTHO05D005824 2.3e-114 415.6 219 100.0
FAN06G2108 Fragaria x ananassa HOM05D004948 ORTHO05D005824 5.2e-114 414.5 219 99.5
FAN10G0469 Fragaria x ananassa HOM05D004948 ORTHO05D005824 6.8e-114 414.1 219 99.5
FAN01G0333 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.3e-112 409.8 219 98.6
FAN06G4897 Fragaria x ananassa HOM05D004948 ORTHO05D005824 2.2e-112 409.1 219 98.6
FvH4_7g30910 Fragaria vesca HOM05D004948 ORTHO05D005824 3.5e-110 401.7 227 94.7
FAN03G1348 Fragaria x ananassa HOM05D004948 ORTHO05D005824 2.9e-104 382.1 219 93.6
Prupe.2G306200 Prunus persica HOM05D004948 ORTHO05D005824 2.4e-87 325.9 233 75.1
Thecc.03G191700 Theobroma cacao HOM05D004948 ORTHO05D005824 1.2e-86 323.6 223 76.7
MD07G1283800 Malus domestica HOM05D004948 ORTHO05D005824 7.8e-86 320.9 227 77.1
MD01G1214200 Malus domestica HOM05D004948 ORTHO05D005824 1.0e-85 320.5 225 76.0
Duzib068G0205 Durio zibethinus HOM05D004948 ORTHO05D005824 1.3e-85 320.1 223 75.8
COL.COLO4_04803 Corchorus olitorius HOM05D004948 ORTHO05D005824 8.7e-85 317.4 223 74.9
CiPaw.06G006800 Carya illinoinensis HOM05D004948 ORTHO05D005824 4.8e-83 311.6 220 73.2
Ciclev10005800m.g Citrus clementina HOM05D004948 ORTHO05D005824 5.3e-82 308.1 226 73.0
ClCG01G000640 Citrullus lanatus HOM05D004948 ORTHO05D005824 6.9e-82 307.8 221 73.3
Dinv28347 Davidia involucrata HOM05D004948 ORTHO05D005824 6.9e-82 307.8 225 72.4
MELO3C005865.2 Cucumis melo HOM05D004948 ORTHO05D005824 9.0e-82 307.4 194 79.4
Cpa.g.sc3.41 Carica papaya HOM05D004948 ORTHO05D005824 1.2e-81 307.0 226 73.5
CsaV3_5G000730 Cucumis sativus L. HOM05D004948 ORTHO05D005824 1.2e-81 307.0 194 78.9
QL09p011186 Quercus lobata HOM05D004948 ORTHO05D005824 1.2e-81 307.0 221 75.6
Duzib205G0398 Durio zibethinus HOM05D004948 ORTHO05D005824 2.0e-81 306.2 223 73.1
Actinidia34187 Actinidia chinensis HOM05D004948 ORTHO05D005824 2.6e-81 305.8 220 73.6
Hma1.2p1_0142F.1_g064080 Hydrangea macrophylla HOM05D004948 ORTHO05D005824 4.5e-81 305.1 230 70.9
RcHm_v2.0_Chr1g0379991 Rosa chinensis HOM05D004948 ORTHO05D005824 5.8e-81 304.7 172 93.0
SalBow2G2244 Salvia bowleyana HOM05D004948 ORTHO05D005824 7.6e-81 304.3 222 72.1
Dinv35301 Davidia involucrata HOM05D004948 ORTHO05D005824 8.4e-80 300.8 203 76.8
Eucgr.A02670 Eucalyptus grandis HOM05D004948 ORTHO05D005824 2.4e-79 299.3 233 69.5
PGSC0003DMG400009097 Solanum tuberosum HOM05D004948 ORTHO05D005824 2.4e-79 299.3 202 76.2
CANSAT21G0873 Cannabis sativa HOM05D004948 ORTHO05D005824 3.2e-79 298.9 223 68.2
Cfa016354 Carpinus fangiana HOM05D004948 ORTHO05D005824 3.2e-79 298.9 222 72.1
PGR042G1790 Punica granatum HOM05D004948 ORTHO05D005824 5.4e-79 298.1 188 81.9
Sed0002242 Sechium edule HOM05D004948 ORTHO05D005824 5.4e-79 298.1 215 70.7
Manes.06G156200 Manihot esculenta HOM05D004948 ORTHO05D005824 9.3e-79 297.4 222 72.5
CAN.G108.18 Capsicum annuum HOM05D004948 ORTHO05D005824 1.2e-78 297.0 214 71.5
Potri.012G033100 Populus trichocarpa HOM05D004948 ORTHO05D005824 1.2e-78 297.0 202 76.7
GSVIVG01028728001 Vitis vinifera HOM05D004948 ORTHO05D005824 1.2e-78 297.0 223 70.4
Gohir.A12G252400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.6e-78 296.6 208 72.1
Atru.chr1.284 Acer truncatum HOM05D004948 ORTHO05D005824 2.1e-78 296.2 216 74.1
MSTRG.65 Avicennia marina HOM05D004948 ORTHO05D005824 2.1e-78 296.2 207 72.9
SGA_v2.0_scaffold10G05268 Striga asiatica HOM05D004948 ORTHO05D005824 2.1e-78 296.2 202 77.2
PGR083G1298 Punica granatum HOM05D004948 ORTHO05D005824 3.5e-78 295.4 224 71.9
Gorai.008G271400 Gossypium raimondii HOM05D004948 ORTHO05D005824 4.6e-78 295.0 208 71.6
arahy.Tifrunner.gnm1.ann1.LZU7FF Arachis hypogaea HOM05D004948 ORTHO05D005824 7.9e-78 294.3 200 74.0
TAR629G2953 Trochodendron aralioides HOM05D004948 ORTHO05D005824 1.3e-77 293.5 225 71.1
Haze_00103 Corylus avellana HOM05D004948 ORTHO05D005824 1.7e-77 293.1 237 67.1
Gohir.D12G253100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 2.3e-77 292.7 208 71.2
Oeu037114.1 Olea europaea HOM05D004948 ORTHO05D005824 2.3e-77 292.7 217 72.4
Solyc03g007480.3 Solanum lycopersicum HOM05D004948 ORTHO05D005824 3.9e-77 292.0 202 73.8
Sopen03g003430 Solanum pennellii HOM05D004948 ORTHO05D005824 3.9e-77 292.0 202 73.8
Migut.F01058 Erythranthe guttata HOM05D004948 ORTHO05D005824 1.5e-76 290.0 199 74.9
vmacro06582 Vaccinium macrocarpon HOM05D004948 ORTHO05D005824 2.5e-76 289.3 233 68.2
MBI07_g20438_MAGBIO Magnolia biondii HOM05D004948 ORTHO05D005824 1.6e-75 286.6 220 71.8
Peaxi162Scf00904g00460 Petunia axillaris HOM05D004948 ORTHO05D005824 3.6e-75 285.4 180 81.7
Potri.015G023400 Populus trichocarpa HOM05D004948 ORTHO05D005824 4.8e-75 285.0 221 70.1
Lj1g0018821 Lotus japonicus HOM05D004948 ORTHO05D005824 2.4e-74 282.7 230 67.0
TAR636G2931 Trochodendron aralioides HOM05D004948 ORTHO05D005824 5.3e-74 281.6 226 69.0
Peaxi162Scf00618g00525 Petunia axillaris HOM05D004948 ORTHO05D005824 7.6e-73 277.7 188 77.1
PGSC0003DMG400028892 Solanum tuberosum HOM05D004948 ORTHO05D005824 7.6e-73 277.7 219 66.7
Solyc06g051820.4 Solanum lycopersicum HOM05D004948 ORTHO05D005824 8.4e-72 274.2 205 70.2
Aqoxy5G04108 Aquilegia oxysepala HOM05D004948 ORTHO05D005824 1.1e-71 273.9 215 66.5
Duzib084G1367 Durio zibethinus HOM05D004948 ORTHO05D005824 1.1e-71 273.9 223 67.7
Rhsim03G0197700 Rhododendron simsii HOM05D004948 ORTHO05D005824 3.2e-71 272.3 220 67.3
EL10Ac3g05356 Beta vulgaris HOM05D004948 ORTHO05D005824 7.1e-71 271.2 211 64.9
Sopen06g017830 Solanum pennellii HOM05D004948 ORTHO05D005824 9.3e-71 270.8 206 69.4
AUR62031482 Chenopodium quinoa HOM05D004948 ORTHO05D005824 1.6e-70 270.0 211 65.4
HanXRQChr13g0392981 Helianthus annuus HOM05D004948 ORTHO05D005824 6.0e-70 268.1 217 65.4
AUR62021051 Chenopodium quinoa HOM05D004948 ORTHO05D005824 7.9e-70 267.7 221 63.8
THA.LOC104800283 Tarenaya hassleriana HOM05D004948 ORTHO05D005824 7.9e-70 267.7 178 77.0
Glyma.13G040600 Glycine max HOM05D004948 ORTHO05D005824 3.0e-69 265.8 206 68.0
ECA233G3864 Erigeron canadensis HOM05D004948 ORTHO05D005824 3.9e-69 265.4 214 66.8
Lsat_1_v5_gn_8_6120 Lactuca sativa HOM05D004948 ORTHO05D005824 6.7e-69 264.6 220 62.7
ATR1132G055 Amborella trichopoda HOM05D004948 ORTHO05D005824 7.4e-68 261.2 185 68.6
Sc19g0001090 Simmondsia chinensis HOM05D004948 ORTHO05D005824 9.6e-68 260.8 206 63.6
Aa31LG5G23580 Aethionema arabicum HOM05D004948 ORTHO05D005824 6.2e-67 258.1 199 67.3
Aa31sc29G60 Aethionema arabicum HOM05D004948 ORTHO05D005824 1.1e-66 257.3 199 67.3
DCAR_010636 Daucus carota HOM05D004948 ORTHO05D005824 5.3e-66 255.0 217 62.7
TWI23G0483 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 1.5e-65 253.4 181 71.3
Lalb_Chr04g0263671 Lupinus albus HOM05D004948 ORTHO05D005824 2.0e-65 253.1 202 64.4
Manes.14G019200 Manihot esculenta HOM05D004948 ORTHO05D005824 2.0e-65 253.1 202 65.3
Carub.0008s1349 Capsella rubella HOM05D004948 ORTHO05D005824 2.9e-64 249.2 219 62.6
Sp6g15460 Schrenkiella parvula HOM05D004948 ORTHO05D005824 1.1e-63 247.3 219 63.0
Sabra12G0022300 Salix brachista HOM05D004948 ORTHO05D005824 1.4e-63 246.9 198 69.7
Nitab4.5_0000472g0200 Nicotiana tabacum HOM05D004948 ORTHO05D005824 1.9e-63 246.5 186 69.9
Nitab4.5_0001331g0180 Nicotiana tabacum HOM05D004948 ORTHO05D005824 1.9e-63 246.5 186 69.9
arahy.Tifrunner.gnm1.ann1.MD6354 Arachis hypogaea HOM05D004948 ORTHO05D005824 7.1e-63 244.6 169 72.8
Nn2g13651 Nelumbo nucifera HOM05D004948 ORTHO05D005824 2.1e-62 243.0 157 77.7
AL8G28010 Arabidopsis lyrata HOM05D004948 ORTHO05D005824 2.7e-62 242.7 223 61.0
Thhalv10014692m.g Eutrema salsugineum HOM05D004948 ORTHO05D005824 3.5e-62 242.3 175 70.3
AT5G53310 Arabidopsis thaliana HOM05D004948 ORTHO05D005824 1.3e-61 240.4 177 68.4
Aa31LG3G9220 Aethionema arabicum HOM05D004948 ORTHO05D005824 3.0e-61 239.2 176 67.0
CARHR266350 Cardamine hirsuta HOM05D004948 ORTHO05D005824 3.0e-61 239.2 211 61.6
BcaB05g22031 Brassica carinata HOM05D004948 ORTHO05D005824 3.9e-61 238.8 174 70.1
Lj3A912T42 Lonicera japonica HOM05D004948 ORTHO05D005824 1.1e-60 237.3 197 64.5
Hund27721 Selenicereus undatus HOM05D004948 ORTHO05D005824 1.1e-60 237.3 230 59.6
Hund27734 Selenicereus undatus HOM05D004948 ORTHO05D005824 1.1e-60 237.3 230 59.6
BcaC03g14431 Brassica carinata HOM05D004948 ORTHO05D005824 1.9e-60 236.5 213 60.6
C02p18470 Brassica napus HOM05D004948 ORTHO05D005824 1.9e-60 236.5 213 60.6
BolC2t07987H Brassica oleracea HOM05D004948 ORTHO05D005824 1.9e-60 236.5 213 60.6
Cc02_g01980 Coffea canephora HOM05D004948 ORTHO05D005824 2.8e-59 232.6 219 60.7
Ca_16670_v3 Cicer arietinum L. HOM05D004948 ORTHO05D005824 3.7e-59 232.3 157 75.8
A02p11140 Brassica napus HOM05D004948 ORTHO05D005824 4.8e-59 231.9 216 58.8
BraA02t06177Z Brassica rapa HOM05D004948 ORTHO05D005824 4.8e-59 231.9 216 58.8
Gohir.D09G178100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 6.3e-59 231.5 156 75.0
Gorai.006G200200 Gossypium raimondii HOM05D004948 ORTHO05D005824 6.3e-59 231.5 156 75.0
Gohir.A09G183400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.1e-58 230.7 156 74.4
CAN.G204.5 Capsicum annuum HOM05D004948 ORTHO05D005824 2.4e-58 229.6 182 65.9
Actinidia31860 Actinidia chinensis HOM05D004948 ORTHO05D005824 4.1e-58 228.8 202 63.9
Lj1g0003063 Lotus japonicus HOM05D004948 ORTHO05D005824 9.0e-58 227.6 157 73.2
Os01g0621700 Oryza sativa ssp. japonica HOM05D004948 ORTHO05D005824 1.2e-57 227.3 171 66.1
Psat0s97g0080 Pisum sativum HOM05D004948 ORTHO05D005824 2.5e-55 219.5 157 72.6
TPR.G33862 Trifolium pratense HOM05D004948 ORTHO05D005824 7.2e-55 218.0 157 70.1
unitig_747.g21853 Utricularia gibba HOM05D004948 ORTHO05D005824 7.2e-55 218.0 156 74.4
Glyma.04G238900 Glycine max HOM05D004948 ORTHO05D005824 4.6e-54 215.3 157 72.6
CDE04G0161 Ceratophyllum demersum HOM05D004948 ORTHO05D005824 7.9e-54 214.5 190 54.7
arahy.Tifrunner.gnm1.ann1.NIM4HJ Arachis hypogaea HOM05D004948 ORTHO05D005824 5.1e-53 211.8 157 69.4
Phvul.009G135700 Phaseolus vulgaris HOM05D004948 ORTHO05D005824 1.1e-52 210.7 157 70.7
HPP92_024433 Vanilla planifolia HOM05D004948 ORTHO05D005824 1.1e-52 210.7 155 65.2
DCAR_008996 Daucus carota HOM05D002473 ORTHO05D005824 3.3e-52 209.1 180 60.0
Glyma.06G124800 Glycine max HOM05D004948 ORTHO05D005824 3.3e-52 209.1 157 71.3
TWI39G0355 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 4.3e-52 208.8 137 77.4
Lalb_Chr08g0240671 Lupinus albus HOM05D004948 ORTHO05D005824 7.4e-52 208.0 157 70.1
DCAR_014528 Daucus carota HOM05D000121 ORTHO05D005824 1.3e-51 207.2 155 65.8
VMungo1309G3087 Vigna mungo HOM05D004948 ORTHO05D005824 8.2e-51 204.5 193 58.0
Medtr3g090670 Medicago truncatula HOM05D004948 ORTHO05D005824 1.1e-50 204.1 147 70.1
Zm00001eb432120 Zea mays HOM05D004948 ORTHO05D005824 5.3e-50 201.8 144 70.1
arahy.Tifrunner.gnm1.ann1.AMC2P5 Arachis hypogaea HOM05D004948 ORTHO05D005824 6.9e-50 201.4 172 63.4
Actinidia08617 Actinidia chinensis HOM05D004948 ORTHO05D005824 4.5e-49 198.7 144 75.7
Mapoly0143s0028 Marchantia polymorpha HOM05D004948 ORTHO05D005824 1.0e-48 197.6 181 57.5
SHI54648 Sapria himalayana HOM05D004948 ORTHO05D005824 1.7e-48 196.8 185 60.5
SHI54754 Sapria himalayana HOM05D004948 ORTHO05D005824 1.7e-48 196.8 185 60.5
Ah.07g206090 Amaranthus hybridus HOM05D004948 ORTHO05D005824 2.9e-48 196.1 136 72.1
Nitab4.5_0002176g0030 Nicotiana tabacum HOM05D004948 ORTHO05D005824 2.9e-48 196.1 125 80.0
CSS0002011 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.1e-47 194.1 118 84.7
SMO361G0401 Selaginella moellendorffii HOM05D004948 ORTHO05D005824 1.1e-47 194.1 204 51.0
AagrBONN_evm.TU.Sc2ySwM_362.1882 Anthoceros agrestis HOM05D004948 ORTHO05D005824 3.9e-45 185.7 194 51.5
Pp3c8_900 Physcomitrium patens HOM05D004948 ORTHO05D005824 1.5e-41 173.7 183 51.9
SEGI_09652 Sequoiadendron giganteum HOM05D004948 ORTHO05D005824 8.5e-40 167.9 137 60.6
CSS0025713 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.6e-38 163.7 105 78.1
CSS0008262 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 4.7e-38 162.2 105 77.1
BolC9t57186H Brassica oleracea HOM05D004948 ORTHO05D005824 6.1e-38 161.8 224 47.3
BcaC04g20470 Brassica carinata HOM05D004948 ORTHO05D005824 6.7e-37 158.3 224 46.0
C09p43150 Brassica napus HOM05D004948 ORTHO05D005824 4.4e-36 155.6 214 47.2
CBR_g39340 Chara braunii HOM05D004948 ORTHO05D005824 1.4e-34 150.6 157 49.0
Lj1P1012T60 Lonicera japonica HOM05D004948 ORTHO05D005824 5.3e-34 148.7 108 71.3
BcaB08g35692 Brassica carinata HOM05D004948 ORTHO05D005824 1.3e-24 117.5 87 67.8
Lalb_Chr23g0271431 Lupinus albus HOM05D004948 ORTHO05D005824 8.0e-22 108.2 157 45.2
MCO05G504 Micromonas commoda HOM05D004948 ORTHO05D005824 5.2e-21 105.5 204 34.3
CSS0011379 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.6e-12 76.6 103 46.6
CSS0022164 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.6e-12 76.6 103 46.6
CSS0007759 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 3.7e-11 72.8 80 51.2


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