Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G0429 Fragaria x ananassa HOM05D002831 ORTHO05D004341 1.4e-113 413.3 260 100.0
FAN10G3196 Fragaria x ananassa HOM05D002831 ORTHO05D004341 8.7e-84 314.3 215 90.2
FAN06G3328 Fragaria x ananassa HOM05D002831 ORTHO05D004341 2.1e-82 309.7 219 88.6
FAN01G0089 Fragaria x ananassa HOM05D002831 ORTHO05D004341 4.8e-82 308.5 219 87.7
FvH4_7g30190 Fragaria vesca HOM05D002831 ORTHO05D004341 5.3e-81 305.1 215 88.8
FAN03G0781 Fragaria x ananassa HOM05D002831 ORTHO05D004341 5.3e-81 305.1 215 88.4
FAN03G0359 Fragaria x ananassa HOM05D002831 ORTHO05D004341 1.5e-80 303.5 219 87.7
RcHm_v2.0_Chr1g0378241 Rosa chinensis HOM05D002831 ORTHO05D004341 3.7e-66 255.8 203 81.3
Prupe.2G300400 Prunus persica HOM05D002831 ORTHO05D004341 2.4e-65 253.1 215 73.5
MD07G1278500 Malus domestica HOM05D002831 ORTHO05D004341 6.9e-57 224.9 216 71.8
MD01G1207900 Malus domestica HOM05D002831 ORTHO05D004341 9.4e-54 214.5 216 69.9
CANSAT11G0421 Cannabis sativa HOM05D002831 ORTHO05D004341 1.7e-50 203.8 215 68.4
Cfa016283 Carpinus fangiana HOM05D002831 ORTHO05D004341 5.9e-48 195.3 218 63.8
QL09p012962 Quercus lobata HOM05D002831 ORTHO05D004341 1.2e-43 181.0 213 63.8
CiPaw.06G003300 Carya illinoinensis HOM05D002831 ORTHO05D004341 1.7e-42 177.2 213 62.9
CiPaw.06G003100 Carya illinoinensis HOM05D002831 ORTHO05D004341 5.3e-41 172.2 213 62.4
Haze_00039 Corylus avellana HOM05D002831 ORTHO05D004341 1.2e-40 171.0 127 63.8
Manes.14G023000 Manihot esculenta HOM05D002831 ORTHO05D004341 3.6e-37 159.5 215 58.6
COL.COLO4_10060 Corchorus olitorius HOM05D002831 ORTHO05D004341 6.1e-37 158.7 214 49.1
Atru.chr1.379 Acer truncatum HOM05D002831 ORTHO05D004341 1.0e-36 157.9 213 48.8
Atru.ctg97_1.16 Acer truncatum HOM05D002831 ORTHO05D004341 1.0e-36 157.9 213 48.8
Thecc.03G183700 Theobroma cacao HOM05D002831 ORTHO05D004341 1.4e-36 157.5 213 48.8
Dinv35249 Davidia involucrata HOM05D002831 ORTHO05D004341 4.0e-36 156.0 200 50.5
Cpa.g.sc107.104 Carica papaya HOM05D002831 ORTHO05D004341 5.2e-36 155.6 213 48.4
Dinv28390 Davidia involucrata HOM05D002831 ORTHO05D004341 8.8e-36 154.8 210 48.1
Ciclev10005857m.g Citrus clementina HOM05D002831 ORTHO05D004341 2.0e-35 153.7 213 46.5
Duzib068G1050 Durio zibethinus HOM05D002831 ORTHO05D004341 8.3e-34 148.3 213 46.9
Manes.06G152100 Manihot esculenta HOM05D002831 ORTHO05D004341 1.8e-33 147.1 212 55.2
Duzib084G1013 Durio zibethinus HOM05D002831 ORTHO05D004341 5.4e-33 145.6 213 47.4
Duzib205G1365 Durio zibethinus HOM05D002831 ORTHO05D004341 1.2e-32 144.4 212 47.6
CiPaw.12G018300 Carya illinoinensis HOM05D002831 ORTHO05D004341 2.7e-32 143.3 127 58.3
Potri.017G143215 Populus trichocarpa HOM05D002831 ORTHO05D004341 4.5e-32 142.5 215 46.0
Actinidia34155 Actinidia chinensis HOM05D002831 ORTHO05D004341 6.5e-31 138.7 210 46.2
TWI23G0387 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 6.5e-31 138.7 213 40.4
Sabra04G0053100 Salix brachista HOM05D002831 ORTHO05D004341 1.5e-30 137.5 215 43.7
arahy.Tifrunner.gnm1.ann1.VWVY78 Arachis hypogaea HOM05D002831 ORTHO05D010484 2.5e-30 136.7 217 50.7
Phvul.004G109000 Phaseolus vulgaris HOM05D002831 ORTHO05D004341 9.5e-30 134.8 207 51.7
VMungo0464G0591 Vigna mungo HOM05D002831 ORTHO05D004341 2.8e-29 133.3 208 51.0
Potri.004G079900 Populus trichocarpa HOM05D002831 ORTHO05D004341 3.6e-29 132.9 213 44.1
TAR374G0609 Trochodendron aralioides HOM05D002831 ORTHO05D004341 4.7e-29 132.5 212 45.8
Glyma.16G179300 Glycine max HOM05D002831 ORTHO05D004341 1.8e-28 130.6 207 51.2
CSS0012099 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 3.0e-28 129.8 210 41.0
CSS0034926 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 3.0e-28 129.8 210 41.0
Gohir.D09G177200 Gossypium hirsutum HOM05D002831 ORTHO05D004341 2.0e-27 127.1 216 44.4
Gorai.006G199200 Gossypium raimondii HOM05D002831 ORTHO05D004341 2.0e-27 127.1 216 44.0
CSS0004722 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 4.4e-27 125.9 210 38.6
CSS0021117 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 4.4e-27 125.9 210 38.6
TAR375G0840 Trochodendron aralioides HOM05D002831 ORTHO05D004341 1.3e-26 124.4 213 55.9
Sabra17G0120100 Salix brachista HOM05D002831 ORTHO05D004341 2.8e-26 123.2 215 41.4
Lj1P1004T73 Lonicera japonica HOM05D002831 ORTHO05D004341 3.7e-26 122.9 207 38.6
Actinidia08576 Actinidia chinensis HOM05D002831 ORTHO05D004341 1.1e-25 121.3 210 43.3
Eucgr.A02748 Eucalyptus grandis HOM05D002831 ORTHO05D004341 4.1e-25 119.4 214 41.1
PGR042G3073 Punica granatum HOM05D002831 ORTHO05D004341 2.7e-24 116.7 213 42.3
Lalb_Chr03g0034811 Lupinus albus HOM05D002831 ORTHO05D004341 1.0e-23 114.8 207 51.2
Oeu036905.1 Olea europaea HOM05D002831 ORTHO05D004341 1.3e-23 114.4 214 42.1
Hma1.2p1_0327F.1_g126410 Hydrangea macrophylla HOM05D002831 ORTHO05D004341 2.3e-23 113.6 216 48.6
Hma1.2p1_0274F.1_g110180 Hydrangea macrophylla HOM05D002831 ORTHO05D004341 3.8e-23 112.8 212 46.2
PGSC0003DMG400028898 Solanum tuberosum HOM05D002831 ORTHO05D004341 3.8e-23 112.8 210 41.9
Gohir.A09G182600 Gossypium hirsutum HOM05D002831 ORTHO05D004341 5.0e-23 112.5 213 42.7
Gohir.D12G256900 Gossypium hirsutum HOM05D002831 ORTHO05D004341 8.6e-23 111.7 214 43.0
Gorai.008G275100 Gossypium raimondii HOM05D002831 ORTHO05D004341 8.6e-23 111.7 214 43.0
Rhsim03G0190700 Rhododendron simsii HOM05D002831 ORTHO05D004341 1.1e-22 111.3 198 42.4
vmacro06629 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 1.1e-22 111.3 222 40.5
Peaxi162Scf00618g00748 Petunia axillaris HOM05D001680 ORTHO05D004341 1.5e-22 110.9 211 40.3
Sopen06g012030 Solanum pennellii HOM05D002831 ORTHO05D004341 1.5e-22 110.9 210 41.4
TWI14G0525 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 1.9e-22 110.5 215 39.5
GSVIVG01028866001 Vitis vinifera HOM05D002831 ORTHO05D010484 1.9e-22 110.5 218 51.8
Cc02_g02420 Coffea canephora HOM05D002831 ORTHO05D004341 2.5e-22 110.2 210 40.5
ClCG05G008340 Citrullus lanatus HOM05D002831 ORTHO05D004341 7.3e-22 108.6 207 54.1
CsaV3_3G017430 Cucumis sativus L. HOM05D002831 ORTHO05D004341 7.3e-22 108.6 207 52.7
Gohir.A12G255500 Gossypium hirsutum HOM05D002831 ORTHO05D004341 1.2e-21 107.8 214 42.1
Nitab4.5_0000084g0400 Nicotiana tabacum HOM05D002831 ORTHO05D004341 1.6e-21 107.5 214 40.7
Glyma.09G132500 Glycine max HOM05D002831 ORTHO05D004341 2.1e-21 107.1 208 42.3
Nitab4.5_0000572g0140 Nicotiana tabacum HOM05D002831 ORTHO05D004341 2.8e-21 106.7 212 40.6
MELO3C006940.2 Cucumis melo HOM05D002831 ORTHO05D004341 6.1e-21 105.5 207 51.7
Nitab4.5_0003825g0080 Nicotiana tabacum HOM05D002831 ORTHO05D004341 3.0e-20 103.2 214 41.1
Sabra06G0007800 Salix brachista HOM05D002831 ORTHO05D010484 3.0e-20 103.2 127 43.3
Oeu060465.1 Olea europaea HOM05D002831 ORTHO05D004341 4.0e-20 102.8 202 36.6
SalBow4G1512 Salvia bowleyana HOM05D002831 ORTHO05D004341 5.2e-20 102.4 211 40.8
Peaxi162Scf00444g00016 Petunia axillaris HOM05D002831 ORTHO05D004341 1.2e-19 101.3 214 40.7
Rhsim09G0200400 Rhododendron simsii HOM05D002831 ORTHO05D004341 2.0e-19 100.5 210 38.6
Actinidia31838 Actinidia chinensis HOM05D002831 ORTHO05D004341 2.6e-19 100.1 212 39.2
Gorai.007G012600 Gossypium raimondii HOM05D002831 ORTHO05D004341 2.6e-19 100.1 215 41.4
TWI39G0102 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 2.6e-19 100.1 214 36.0
Oeu045362.1 Olea europaea HOM05D002831 ORTHO05D004341 3.4e-19 99.8 215 39.5
Aqoxy7G00243 Aquilegia oxysepala HOM05D002831 ORTHO05D004341 7.5e-19 98.6 215 41.4
Sed0011382 Sechium edule HOM05D002831 ORTHO05D004341 7.5e-19 98.6 207 50.7
DCAR_009393 Daucus carota HOM05D002831 ORTHO05D004341 2.9e-18 96.7 210 37.1
Gohir.D11G011100 Gossypium hirsutum HOM05D002831 ORTHO05D004341 4.9e-18 95.9 215 40.0
PGSC0003DMG400010167 Solanum tuberosum HOM05D002831 ORTHO05D004341 6.4e-18 95.5 198 39.4
DCAR_020268 Daucus carota HOM05D002831 ORTHO05D004341 8.3e-18 95.1 210 32.4
Solyc06g036250.2 Solanum lycopersicum HOM05D002831 ORTHO05D004341 8.3e-18 95.1 127 41.7
CAN.G126.12 Capsicum annuum HOM05D002831 ORTHO05D004341 1.8e-17 94.0 212 37.3
Gohir.A11G011900 Gossypium hirsutum HOM05D002831 ORTHO05D004341 2.4e-17 93.6 215 40.0
THA.LOC104800271 Tarenaya hassleriana HOM05D002831 ORTHO05D004341 7.0e-17 92.0 195 32.8
Glyma.10G231300 Glycine max HOM05D002831 ORTHO05D004341 9.2e-17 91.7 207 45.4
MSTRG.27090 Avicennia marina HOM05D002831 ORTHO05D004341 1.2e-16 91.3 210 40.0
Sopen03g003930 Solanum pennellii HOM05D002831 ORTHO05D004341 1.6e-16 90.9 199 38.7
Glyma.20G162500 Glycine max HOM05D002831 ORTHO05D004341 3.5e-16 89.7 207 44.9
Lj5g0008853 Lotus japonicus HOM05D002831 ORTHO05D004341 3.5e-16 89.7 209 45.9
Sed0001656 Sechium edule HOM05D002831 ORTHO05D004341 6.0e-16 89.0 206 50.5
Ca_10728_v3 Cicer arietinum L. HOM05D002831 ORTHO05D004341 2.3e-15 87.0 211 45.5
MSTRG.74 Avicennia marina HOM05D002831 ORTHO05D004341 3.0e-15 86.7 210 34.8
Lalb_Chr02g0141231 Lupinus albus HOM05D002831 ORTHO05D004341 3.0e-15 86.7 208 39.4
PSO478G4817 Papaver somniferum HOM05D002831 ORTHO05D004341 5.0e-15 85.9 202 34.7
EL10Ac3g05428 Beta vulgaris HOM05D002831 ORTHO05D004341 1.5e-14 84.3 196 35.7
Lalb_Chr06g0161301 Lupinus albus HOM05D002831 ORTHO05D004341 2.5e-14 83.6 207 47.8
MBI11_g04751_MAGBIO Magnolia biondii HOM05D002831 ORTHO05D004341 2.5e-14 83.6 201 46.8
MSTRG.8713 Avicennia marina HOM05D002831 ORTHO05D004341 3.3e-14 83.2 205 46.8
PSO782G2858 Papaver somniferum HOM05D002831 ORTHO05D004341 3.3e-14 83.2 216 34.3
Gorai.004G117400 Gossypium raimondii HOM05D002831 ORTHO05D004341 5.6e-14 82.4 203 38.4
Psat6g196360 Pisum sativum HOM05D002831 ORTHO05D004341 5.6e-14 82.4 209 46.4
VMungo0720G1018 Vigna mungo HOM05D002831 ORTHO05D004341 7.3e-14 82.0 208 46.6
Nitab4.5_0000248g0010 Nicotiana tabacum HOM05D002831 ORTHO05D004341 9.5e-14 81.6 129 40.3
AUR62021127 Chenopodium quinoa HOM05D002831 ORTHO05D004341 2.1e-13 80.5 192 30.7
AUR62031417 Chenopodium quinoa HOM05D002831 ORTHO05D004341 6.2e-13 79.0 192 30.2
Gohir.A08G098200 Gossypium hirsutum HOM05D002831 ORTHO05D004341 6.2e-13 79.0 201 38.3
TPR.G7753 Trifolium pratense HOM05D002831 ORTHO05D004341 6.2e-13 79.0 209 43.1
Gohir.D08G109800 Gossypium hirsutum HOM05D002831 ORTHO05D004341 2.3e-12 77.0 201 38.3
Sp7g23710 Schrenkiella parvula HOM05D002831 ORTHO05D004341 2.9e-10 70.1 213 29.6
THA.LOC104811959 Tarenaya hassleriana HOM05D002831 ORTHO05D004341 3.2e-09 66.6 129 34.9
Ah.07g206590 Amaranthus hybridus HOM05D002831 ORTHO05D004341 5.4e-09 65.9 211 30.3
CARHR233110 Cardamine hirsuta HOM05D002831 ORTHO05D004341 5.4e-09 65.9 213 28.6
AL7G27410 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 2.1e-08 63.9 213 28.6
Carub.0007s1530 Capsella rubella HOM05D002831 ORTHO05D004341 2.1e-08 63.9 213 28.6
Thhalv10027473m.g Eutrema salsugineum HOM05D002831 ORTHO05D004341 3.5e-08 63.2 213 28.6
BraA01t01645Z Brassica rapa HOM05D002831 ORTHO05D004341 6.0e-08 62.4 214 29.4
AT4G25670 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 1.0e-07 61.6 214 28.0
BraA02t06237Z Brassica rapa HOM05D002831 ORTHO05D004341 1.0e-07 61.6 199 26.6
BNapus_Darmor_BZH_scaffold_232p00070 Brassica napus HOM05D002831 ORTHO05D004341 1.3e-07 61.2 199 26.6
TPR.G21560 Trifolium pratense HOM05D002831 ORTHO05D004341 3.9e-07 59.7 210 39.0
Migut.F00296 Erythranthe guttata HOM05D002831 ORTHO05D004341 6.6e-07 58.9 212 32.1
ATR0661G020 Amborella trichopoda HOM05D002831 ORTHO05D004341 8.6e-07 58.5 220 30.9
CAN.G204.16 Capsicum annuum HOM05D002831 ORTHO05D004341 1.1e-06 58.2 199 34.7
A02p11720 Brassica napus HOM05D002831 ORTHO05D004341 1.9e-06 57.4 199 26.1
AL7G27390 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 2.5e-06 57.0 214 29.0
BolC1t02046H Brassica oleracea HOM05D002831 ORTHO05D004341 2.5e-06 57.0 215 28.8
Ah.13g069150 Amaranthus hybridus HOM05D002831 ORTHO05D004341 5.6e-06 55.8 190 28.4


User provided reference genes

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