Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G0327 Fragaria x ananassa HOM05D011407 ORTHO05D014639 1.7e-49 199.1 110 100.0
FAN10G0888 Fragaria x ananassa HOM05D011407 ORTHO05D014639 3.9e-41 171.4 83 97.6
FAN03G2799 Fragaria x ananassa HOM05D011407 ORTHO05D014639 7.3e-40 167.2 83 95.2
FAN01G0146 Fragaria x ananassa HOM05D011407 ORTHO05D014639 3.4e-37 158.3 83 94.0
FvH4_7g12870 Fragaria vesca HOM05D011407 ORTHO05D014639 5.4e-35 151.0 72 95.8
FAN06G0802 Fragaria x ananassa HOM05D011407 ORTHO05D014639 5.4e-35 151.0 72 95.8
FAN06G3076 Fragaria x ananassa HOM05D011407 ORTHO05D014639 4.6e-26 121.3 72 81.9
FAN10G1857 Fragaria x ananassa HOM05D011407 ORTHO05D014639 8.1e-23 110.5 81 67.9
FAN10G3018 Fragaria x ananassa HOM05D011407 ORTHO05D014639 8.1e-23 110.5 81 67.9
FvH4_7g12880 Fragaria vesca HOM05D011407 ORTHO05D014639 1.4e-22 109.8 81 67.9
FAN01G2343 Fragaria x ananassa HOM05D011407 ORTHO05D014639 2.4e-22 109.0 81 66.7
FAN06G1639 Fragaria x ananassa HOM05D011407 ORTHO05D014639 3.1e-22 108.6 81 66.7
RcHm_v2.0_Chr4g0439191 Rosa chinensis HOM05D011407 ORTHO05D014639 4.4e-21 104.8 85 57.6
FAN06G0239 Fragaria x ananassa HOM05D011407 ORTHO05D014639 5.8e-21 104.4 81 65.4
RcHm_v2.0_Chr2g0089651 Rosa chinensis HOM05D011407 ORTHO05D000088 9.9e-21 103.6 83 62.7
RcHm_v2.0_Chr1g0351951 Rosa chinensis HOM05D011407 ORTHO05D000088 8.4e-20 100.5 82 59.8
Prupe.7G144200 Prunus persica HOM05D000395 ORTHO05D000088 2.1e-10 69.3 79 38.0
FAN26G3456 Fragaria x ananassa HOM05D000395 ORTHO05D000088 2.3e-09 65.9 85 35.3
vmacro17894 Vaccinium macrocarpon HOM05D000823 ORTHO05D000088 3.0e-09 65.5 68 35.3
RcHm_v2.0_Chr2g0118951 Rosa chinensis HOM05D000395 ORTHO05D000088 3.9e-09 65.1 58 44.8
vmacro17896 Vaccinium macrocarpon HOM05D000823 ORTHO05D000088 8.7e-09 63.9 56 39.3
Dinv26764 Davidia involucrata HOM05D000823 ORTHO05D000088 1.5e-08 63.2 63 38.1
RhsimUnG0104100 Rhododendron simsii HOM05D000395 ORTHO05D000088 1.5e-08 63.2 69 39.1
RhsimUnG0104500 Rhododendron simsii HOM05D000395 ORTHO05D000088 1.5e-08 63.2 69 37.7
QL10p039053 Quercus lobata HOM05D000395 ORTHO05D000088 1.9e-08 62.8 59 40.7
RcHm_v2.0_Chr6g0259781 Rosa chinensis HOM05D000823 ORTHO05D000088 1.9e-08 62.8 59 47.5
vmacro04665 Vaccinium macrocarpon HOM05D000823 ORTHO05D000088 1.9e-08 62.8 68 33.8
FvH4_1g23530 Fragaria vesca HOM05D000823 ORTHO05D000088 2.5e-08 62.4 79 34.2
FAN19G1451 Fragaria x ananassa HOM05D000823 ORTHO05D000088 2.5e-08 62.4 79 34.2
FvH4_2g13150 Fragaria vesca HOM05D000011 ORTHO05D000157 4.3e-08 61.6 56 41.1
RcHm_v2.0_Chr2g0103411 Rosa chinensis HOM05D000395 ORTHO05D000088 5.6e-08 61.2 80 33.8
Dinv26759 Davidia involucrata HOM05D000823 ORTHO05D000088 7.3e-08 60.8 62 35.5
Ah.06g189670 Amaranthus hybridus HOM05D000823 ORTHO05D000088 9.6e-08 60.5 70 34.3
Lsat_1_v5_gn_4_177680 Lactuca sativa HOM05D000823 ORTHO05D000088 9.6e-08 60.5 54 40.7
Sp6g02680 Schrenkiella parvula HOM05D006628 ORTHO05D000088 9.6e-08 60.5 79 36.7
Cc00_g00230 Coffea canephora HOM05D008110 ORTHO05D000088 1.3e-07 60.1 70 37.1
Dinv26761 Davidia involucrata HOM05D000395 ORTHO05D000088 1.3e-07 60.1 82 31.7
FAN13G0933 Fragaria x ananassa HOM05D000395 ORTHO05D000088 1.3e-07 60.1 73 35.6
FAN08G3323 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.6e-07 59.7 74 36.5
PGR102G2553 Punica granatum HOM05D000823 ORTHO05D000088 1.6e-07 59.7 77 35.1
Carub.0006s1299 Capsella rubella HOM05D006628 ORTHO05D000088 2.1e-07 59.3 73 35.6
FvH4_2g07240 Fragaria vesca HOM05D000823 ORTHO05D009132 2.1e-07 59.3 102 31.4
FAN24G1365 Fragaria x ananassa HOM05D000823 ORTHO05D009132 2.1e-07 59.3 102 31.4
Lj2C600T9 Lonicera japonica HOM05D000395 ORTHO05D000088 2.1e-07 59.3 56 39.3
FvH4_5g19930 Fragaria vesca HOM05D000823 ORTHO05D000088 2.8e-07 58.9 74 35.1
FAN04G0695 Fragaria x ananassa HOM05D000395 ORTHO05D000088 2.8e-07 58.9 74 36.5
SalBow8G3609 Salvia bowleyana HOM05D000823 ORTHO05D000088 2.8e-07 58.9 83 33.7
Aqoxy6G00928 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 3.6e-07 58.5 67 35.8
Aqoxy6G00935 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 3.6e-07 58.5 57 36.8
Lj2A600T56 Lonicera japonica HOM05D000395 ORTHO05D000088 3.6e-07 58.5 56 37.5
vmacro16013 Vaccinium macrocarpon HOM05D000395 ORTHO05D000088 3.6e-07 58.5 62 33.9
AUR62005183 Chenopodium quinoa HOM05D000823 ORTHO05D000088 4.8e-07 58.2 53 39.6
Lj2A601G13 Lonicera japonica HOM05D000395 ORTHO05D000088 4.8e-07 58.2 56 39.3
Prupe.7G144100 Prunus persica HOM05D000395 ORTHO05D000088 4.8e-07 58.2 58 37.9
Rhsim09G0072000 Rhododendron simsii HOM05D000395 ORTHO05D000088 4.8e-07 58.2 54 35.2
Oeu013043.1 Olea europaea HOM05D000823 ORTHO05D000088 6.2e-07 57.8 58 41.4
AT3G06160 Arabidopsis thaliana HOM05D006628 ORTHO05D000088 8.1e-07 57.4 78 32.1
Thhalv10028696m.g Eutrema salsugineum HOM05D006628 ORTHO05D000088 8.1e-07 57.4 80 37.5
FvH4_2g06960 Fragaria vesca HOM05D000823 ORTHO05D000088 8.1e-07 57.4 70 38.6
PGSC0003DMG400005934 Solanum tuberosum HOM05D000823 ORTHO05D000088 8.1e-07 57.4 54 42.6
TAR628G1487 Trochodendron aralioides HOM05D000823 ORTHO05D000088 8.1e-07 57.4 84 28.6
ClCG01G016540 Citrullus lanatus HOM05D000395 ORTHO05D000088 1.1e-06 57.0 62 33.9
ECA232G4654 Erigeron canadensis HOM05D000823 ORTHO05D016096 1.1e-06 57.0 54 37.0
Dinv42109 Davidia involucrata HOM05D008110 ORTHO05D000088 1.4e-06 56.6 55 36.4
FAN27G1325 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.4e-06 56.6 56 37.5
Lj2A565G28 Lonicera japonica HOM05D000395 ORTHO05D000088 1.4e-06 56.6 56 35.7
RcHm_v2.0_Chr6g0259321 Rosa chinensis HOM05D000823 ORTHO05D000088 1.4e-06 56.6 63 39.7
TAR376G0714 Trochodendron aralioides HOM05D000823 ORTHO05D000088 1.4e-06 56.6 59 35.6
ATR0796G296 Amborella trichopoda HOM05D000823 ORTHO05D000088 2.4e-06 55.8 71 39.4
FvH4_1g14620 Fragaria vesca HOM05D000395 ORTHO05D000088 2.4e-06 55.8 85 31.8
FvH4_2g07300 Fragaria vesca HOM05D000823 ORTHO05D000088 2.4e-06 55.8 56 37.5
FAN19G0713 Fragaria x ananassa HOM05D000395 ORTHO05D000088 2.4e-06 55.8 85 31.8
FAN23G2649 Fragaria x ananassa HOM05D000823 ORTHO05D000088 2.4e-06 55.8 62 35.5
FAN24G0466 Fragaria x ananassa HOM05D000823 ORTHO05D000088 2.4e-06 55.8 56 37.5
Lj2A565G29 Lonicera japonica HOM05D000395 ORTHO05D000088 2.4e-06 55.8 56 35.7
AT1G16640 Arabidopsis thaliana HOM05D006628 ORTHO05D000088 3.1e-06 55.5 78 37.2
CsaV3_6G042820 Cucumis sativus L. HOM05D007907 ORTHO05D009079 3.1e-06 55.5 61 32.8
Aa31LG7G14390 Aethionema arabicum HOM05D006628 ORTHO05D000088 4.0e-06 55.1 74 36.5
MELO3C007522.2 Cucumis melo HOM05D007907 ORTHO05D009079 4.0e-06 55.1 61 32.8
FvH4_7g04060 Fragaria vesca HOM05D000395 ORTHO05D000088 4.0e-06 55.1 91 30.8
FAN03G1401 Fragaria x ananassa HOM05D000395 ORTHO05D000088 4.0e-06 55.1 91 30.8
FAN06G4820 Fragaria x ananassa HOM05D000395 ORTHO05D000088 4.0e-06 55.1 91 30.8
RcHm_v2.0_Chr1g0350161 Rosa chinensis HOM05D000395 ORTHO05D000088 4.0e-06 55.1 88 33.0
RcHm_v2.0_Chr2g0103391 Rosa chinensis HOM05D000395 ORTHO05D000088 4.0e-06 55.1 59 35.6
RcHm_v2.0_Chr6g0259811 Rosa chinensis HOM05D000823 ORTHO05D009132 4.0e-06 55.1 56 39.3
Ah.06g189660 Amaranthus hybridus HOM05D000823 ORTHO05D000088 5.3e-06 54.7 61 36.1
Carub.0007s0593 Capsella rubella HOM05D006628 ORTHO05D000088 5.3e-06 54.7 81 38.3
CAN.G322.59 Capsicum annuum HOM05D008110 ORTHO05D000088 5.3e-06 54.7 68 32.4
TAR625G0462 Trochodendron aralioides HOM05D000823 ORTHO05D000088 5.3e-06 54.7 58 31.0
Migut.M00219 Erythranthe guttata HOM05D000823 ORTHO05D000088 6.9e-06 54.3 69 39.1
Nn5g29401 Nelumbo nucifera HOM05D000823 ORTHO05D000088 6.9e-06 54.3 60 38.3
QL11p039199 Quercus lobata HOM05D000823 ORTHO05D000088 6.9e-06 54.3 57 36.8
Sopen06g030390 Solanum pennellii HOM05D000823 ORTHO05D000088 6.9e-06 54.3 54 38.9
AT3G06220 Arabidopsis thaliana HOM05D006628 ORTHO05D000088 9.0e-06 53.9 72 33.3
CSS0019656 Camellia sinensis var. sinensis HOM05D000823 ORTHO05D000088 9.0e-06 53.9 61 32.8
vmacro21190 Vaccinium macrocarpon HOM05D005797 ORTHO05D006479 9.0e-06 53.9 63 34.9


User provided reference genes

Program Settings