Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G0264 Fragaria x ananassa HOM05D006684 ORTHO05D008443 5.4e-106 387.9 228 100.0
FvH4_7g12340 Fragaria vesca HOM05D006684 ORTHO05D008443 1.7e-104 382.9 228 93.4
FAN06G2821 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.7e-104 382.9 228 93.4
FAN06G3889 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.7e-104 382.9 228 93.4
FAN03G1779 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.6e-102 376.3 239 93.3
FAN01G2432 Fragaria x ananassa HOM05D006684 ORTHO05D008443 2.1e-102 375.9 228 92.5
RcHm_v2.0_Chr1g0351131 Rosa chinensis HOM05D006684 ORTHO05D008443 2.5e-90 335.9 228 84.6
FAN10G2097 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.6e-89 333.2 228 90.4
Prupe.2G148900 Prunus persica HOM05D006684 ORTHO05D008443 1.1e-61 240.7 232 63.8
MD02G1199700 Malus domestica HOM05D006684 ORTHO05D008443 5.9e-60 235.0 234 67.5
GSVIVG01027546001 Vitis vinifera HOM05D006684 ORTHO05D008443 2.6e-47 193.0 244 51.2
Cfa010232 Carpinus fangiana HOM05D006684 ORTHO05D008443 1.3e-46 190.7 235 56.2
CiPaw.01G260000 Carya illinoinensis HOM05D006684 ORTHO05D008443 3.5e-44 182.6 242 50.0
TAR636G0929 Trochodendron aralioides HOM05D006684 ORTHO05D008443 2.9e-43 179.5 239 49.8
MELO3C022508.2 Cucumis melo HOM05D006684 ORTHO05D008443 5.0e-43 178.7 234 47.9
Ciclev10022036m.g Citrus clementina HOM05D006684 ORTHO05D008443 1.5e-42 177.2 235 51.1
Cpa.g.sc18.149 Carica papaya HOM05D006684 ORTHO05D008443 2.5e-42 176.4 236 50.0
CsaV3_6G006090 Cucumis sativus L. HOM05D006684 ORTHO05D008443 4.2e-42 175.6 229 55.0
QL08p051764 Quercus lobata HOM05D006684 ORTHO05D008443 5.5e-42 175.3 235 54.5
Sed0022399 Sechium edule HOM05D006684 ORTHO05D008443 7.2e-42 174.9 235 46.4
LjContig00136g0018410 Lotus japonicus HOM05D006684 ORTHO05D008443 1.4e-40 170.6 225 52.4
Nitab4.5_0010110g0010 Nicotiana tabacum HOM05D006684 ORTHO05D008443 1.4e-40 170.6 228 47.4
Dinv32395 Davidia involucrata HOM05D006684 ORTHO05D008443 1.8e-40 170.2 243 48.1
Atru.chr5.338 Acer truncatum HOM05D006684 ORTHO05D008443 3.0e-40 169.5 238 51.3
C04p71620 Brassica napus HOM05D000147 ORTHO05D007841 1.5e-39 167.2 238 50.0
CSS0020305 Camellia sinensis var. sinensis HOM05D006684 ORTHO05D008443 1.5e-39 167.2 238 48.7
Sp4g27550 Schrenkiella parvula HOM05D006684 ORTHO05D008443 2.6e-39 166.4 236 48.3
Aa31LG1G27020 Aethionema arabicum HOM05D006684 ORTHO05D008443 3.4e-39 166.0 226 53.1
Thhalv10001611m.g Eutrema salsugineum HOM05D006684 ORTHO05D008443 2.2e-38 163.3 240 50.4
BraA04t18849Z Brassica rapa HOM05D000147 ORTHO05D007841 3.7e-38 162.5 234 49.6
Aqoxy7G00540 Aquilegia oxysepala HOM05D006684 ORTHO05D008443 1.4e-37 160.6 238 48.3
Glyma.09G267200 Glycine max HOM05D006684 ORTHO05D008443 2.4e-37 159.8 244 47.5
Nn6g34351 Nelumbo nucifera HOM05D006684 ORTHO05D008443 4.1e-37 159.1 242 48.8
BcaB06g29418 Brassica carinata HOM05D006684 ORTHO05D008443 7.0e-37 158.3 238 50.8
BolC4t28667H Brassica oleracea HOM05D000147 ORTHO05D007841 7.0e-37 158.3 238 48.7
CARHR140710 Cardamine hirsuta HOM05D006684 ORTHO05D008443 7.0e-37 158.3 233 50.2
BcaC02g07085 Brassica carinata HOM05D006684 ORTHO05D008443 1.2e-36 157.5 232 52.6
ClCG06G000300 Citrullus lanatus HOM05D006684 ORTHO05D008443 1.2e-36 157.5 281 45.2
ECA240G0119 Erigeron canadensis HOM05D006684 ORTHO05D008443 2.0e-36 156.8 224 51.3
AL4G44700 Arabidopsis lyrata HOM05D006684 ORTHO05D008443 2.7e-36 156.4 222 47.7
COL.COLO4_12585 Corchorus olitorius HOM05D006684 ORTHO05D008443 4.5e-36 155.6 234 46.2
CANSAT94G0012 Cannabis sativa HOM05D006684 ORTHO05D008443 7.7e-36 154.8 228 50.4
Carub.0004s2814 Capsella rubella HOM05D006684 ORTHO05D008443 1.0e-35 154.5 224 54.0
Sopen05g028070 Solanum pennellii HOM05D006684 ORTHO05D008443 1.3e-35 154.1 230 44.3
A04p33890 Brassica napus HOM05D000147 ORTHO05D007841 1.7e-35 153.7 234 48.3
PSO478G1842 Papaver somniferum HOM05D006684 ORTHO05D008443 3.8e-35 152.5 255 47.5
TWI59G0969 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 6.6e-35 151.8 227 46.7
Lalb_Chr03g0039091 Lupinus albus HOM05D006684 ORTHO05D008443 8.6e-35 151.4 229 48.0
AT2G45520 Arabidopsis thaliana HOM05D006684 ORTHO05D008443 1.1e-34 151.0 222 50.0
Manes.05G043400 Manihot esculenta HOM05D006684 ORTHO05D008443 2.5e-34 149.8 233 48.5
Nitab4.5_0001702g0200 Nicotiana tabacum HOM05D006684 ORTHO05D008443 3.3e-34 149.4 226 48.7
arahy.Tifrunner.gnm1.ann1.CFQ18P Arachis hypogaea HOM05D006684 ORTHO05D008443 1.2e-33 147.5 233 46.4
arahy.Tifrunner.gnm1.ann1.3Z62KU Arachis hypogaea HOM05D006684 ORTHO05D008443 1.6e-33 147.1 233 45.9
BolC4t22271H Brassica oleracea HOM05D006684 ORTHO05D008443 1.6e-33 147.1 223 46.6
EL10Ac1g00926 Beta vulgaris HOM05D006684 ORTHO05D008443 2.1e-33 146.7 239 44.4
PGSC0003DMG400021635 Solanum tuberosum HOM05D006684 ORTHO05D008443 2.1e-33 146.7 228 44.3
Thecc.01G373000 Theobroma cacao HOM05D006684 ORTHO05D008443 2.8e-33 146.4 233 48.9
Hund17005 Selenicereus undatus HOM05D006684 ORTHO05D008443 3.6e-33 146.0 255 47.8
THA.LOC104801995 Tarenaya hassleriana HOM05D006684 ORTHO05D008443 2.3e-32 143.3 233 47.2
Manes.12G048300 Manihot esculenta HOM05D006684 ORTHO05D008443 1.5e-31 140.6 236 45.8
HanXRQChr03g0093671 Helianthus annuus HOM05D006684 ORTHO05D008443 3.4e-31 139.4 225 49.3
CDE04G1869 Ceratophyllum demersum HOM05D006684 ORTHO05D008443 6.3e-30 135.2 238 42.0
Cc02_g36430 Coffea canephora HOM05D006684 ORTHO05D008443 6.3e-30 135.2 234 43.2
Gorai.007G092800 Gossypium raimondii HOM05D006684 ORTHO05D008443 6.3e-30 135.2 229 42.4
Os06g0129800 Oryza sativa ssp. japonica HOM05D006684 ORTHO05D008443 6.3e-30 135.2 242 40.1
SGA_v2.0_scaffold11G05605 Striga asiatica HOM05D006684 ORTHO05D008443 1.1e-29 134.4 230 49.6
Gohir.D11G086900 Gossypium hirsutum HOM05D006684 ORTHO05D008443 1.8e-29 133.7 229 42.4
Gohir.A11G082800 Gossypium hirsutum HOM05D006684 ORTHO05D008443 2.4e-29 133.3 230 43.5
Eucgr.E01357 Eucalyptus grandis HOM05D006684 ORTHO05D008443 4.1e-29 132.5 241 39.8
Phvul.008G074700 Phaseolus vulgaris HOM05D006684 ORTHO05D008443 4.1e-29 132.5 237 42.6
VMungo1383G3715 Vigna mungo HOM05D006684 ORTHO05D008443 7.0e-29 131.7 233 43.8
BraA05t19524Z Brassica rapa HOM05D006684 ORTHO05D008443 2.0e-28 130.2 207 44.9
Potri.014G072400 Populus trichocarpa HOM05D006684 ORTHO05D008443 2.7e-28 129.8 230 46.1
PGR042G1390 Punica granatum HOM05D006684 ORTHO05D008443 7.8e-28 128.3 234 39.7
TPR.G37765 Trifolium pratense HOM05D006684 ORTHO05D008443 6.6e-27 125.2 225 46.2
CAN.G333.1 Capsicum annuum HOM05D006684 ORTHO05D008443 8.6e-27 124.8 233 50.2
MSTRG.4882 Avicennia marina HOM05D006684 ORTHO05D008443 1.1e-26 124.4 236 39.0
AUR62004244 Chenopodium quinoa HOM05D006684 ORTHO05D008443 1.5e-26 124.0 218 44.5
Lsat_1_v5_gn_3_135520 Lactuca sativa HOM05D006684 ORTHO05D008443 2.5e-26 123.2 224 44.2
Peaxi162Scf00207g00165 Petunia axillaris HOM05D006684 ORTHO05D008443 2.5e-26 123.2 233 45.9
Manes.12G048301 Manihot esculenta HOM05D006684 ORTHO05D008443 3.3e-26 122.9 232 46.1
Medtr7g075640 Medicago truncatula HOM05D006684 ORTHO05D008443 7.3e-26 121.7 227 43.6
Duzib133G0994 Durio zibethinus HOM05D006684 ORTHO05D008443 1.0e-24 117.9 227 41.0
Zm00001eb378390 Zea mays HOM05D006684 ORTHO05D008443 1.0e-24 117.9 230 37.8
Manes.12G053501 Manihot esculenta HOM05D006684 ORTHO05D008443 1.8e-24 117.1 232 45.3
vmacro20994 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 1.8e-24 117.1 355 35.8
SalBow5G0966 Salvia bowleyana HOM05D006684 ORTHO05D008443 2.3e-24 116.7 251 39.8
Rhsim01G0161500 Rhododendron simsii HOM05D006684 ORTHO05D008443 3.1e-24 116.3 113 62.8
SalBow5G5079 Salvia bowleyana HOM05D006684 ORTHO05D008443 6.8e-24 115.2 251 37.8
PSO782G3084 Papaver somniferum HOM05D006684 ORTHO05D008443 2.0e-23 113.6 107 65.4
Sc02g0002410 Simmondsia chinensis HOM05D006684 ORTHO05D008443 2.0e-23 113.6 212 41.0
Hma1.2p1_0053F.1_g030880 Hydrangea macrophylla HOM05D006684 ORTHO05D008443 5.8e-23 112.1 241 38.6
Duzib138G0092 Durio zibethinus HOM05D006684 ORTHO05D008443 3.7e-22 109.4 112 60.7
Solyc05g048750.3 Solanum lycopersicum HOM05D006684 ORTHO05D008443 8.3e-22 108.2 111 56.8
C04p06480 Brassica napus HOM05D000921 ORTHO05D002852 4.6e-20 102.4 109 58.7
AUR62013604 Chenopodium quinoa HOM05D006684 ORTHO05D008443 7.8e-20 101.7 233 39.9
Ah.07g198740 Amaranthus hybridus HOM05D006684 ORTHO05D008443 1.7e-19 100.5 192 41.7
Haze_16739 Corylus avellana HOM05D006684 ORTHO05D008443 3.3e-18 96.3 67 71.6
vmacro20995 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 9.5e-18 94.7 85 64.7
Duzib138G0657 Durio zibethinus HOM05D006684 ORTHO05D008443 1.2e-17 94.4 139 46.8
Migut.N01586 Erythranthe guttata HOM05D006684 ORTHO05D008443 1.2e-17 94.4 106 51.9
TWI23G1019 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 2.8e-17 93.2 113 54.0
ATR0757G101 Amborella trichopoda HOM05D006684 ORTHO05D008443 4.0e-16 89.4 109 49.5
Ca_07836_v3 Cicer arietinum L. HOM05D006684 ORTHO05D008443 1.2e-15 87.8 73 63.0
Oeu036610.1 Olea europaea HOM05D006684 ORTHO05D008443 1.2e-15 87.8 79 60.8
unitig_578.g16483 Utricularia gibba HOM05D006684 ORTHO05D008443 1.2e-15 87.8 199 33.7
SEGI_35511 Sequoiadendron giganteum HOM05D006684 ORTHO05D008443 1.3e-14 84.3 244 31.6
Psat3g104080 Pisum sativum HOM05D006684 ORTHO05D008443 2.2e-14 83.6 101 50.5
SMO347G0023 Selaginella moellendorffii HOM05D006684 ORTHO05D008443 4.1e-13 79.3 221 33.9
Haze_16738 Corylus avellana HOM05D006684 ORTHO05D008443 9.2e-13 78.2 148 39.9
Zm00001eb269540 Zea mays HOM05D006684 ORTHO05D008443 2.1e-12 77.0 88 53.4
Pp3c22_10350 Physcomitrium patens HOM05D006684 ORTHO05D008443 4.6e-12 75.9 237 31.2
MBI12_g38018_MAGBIO Magnolia biondii HOM05D006684 ORTHO05D008443 1.0e-11 74.7 154 38.3
Mapoly0084s0081 Marchantia polymorpha HOM05D006684 ORTHO05D008443 5.1e-11 72.4 229 31.0
SGA_v2.0_scaffold43G16466 Striga asiatica HOM05D006684 ORTHO05D008443 8.6e-11 71.6 113 43.4
Actinidia33456 Actinidia chinensis HOM05D006684 ORTHO05D008443 7.3e-10 68.6 141 36.2
AagrBONN_evm.TU.Sc2ySwM_344.4110 Anthoceros agrestis HOM05D006684 ORTHO05D008443 9.5e-10 68.2 234 29.5
HPP92_020257 Vanilla planifolia HOM05D006684 ORTHO05D008443 4.7e-09 65.9 209 33.5


User provided reference genes

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