Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G0100 Fragaria x ananassa HOM05D025748 ORTHO05D014192 1.2e-149 533.1 263 100.0
FAN09G1956 Fragaria x ananassa HOM05D015769 ORTHO05D014192 5.2e-44 182.2 191 54.5
FAN16G1618 Fragaria x ananassa HOM05D015769 ORTHO05D014192 7.8e-32 141.7 75 90.7
FAN20G0565 Fragaria x ananassa HOM05D025748 ORTHO05D014192 1.2e-29 134.4 89 75.3
FAN05G5486 Fragaria x ananassa HOM05D015769 ORTHO05D014192 6.2e-29 132.1 71 85.9
FAN15G2412 Fragaria x ananassa HOM05D025748 ORTHO05D014192 3.4e-27 126.3 82 79.3
FvH4_2g16111 Fragaria vesca HOM05D000047 ORTHO05D014192 7.8e-24 115.2 174 42.5
Rhsim05G0166400 Rhododendron simsii HOM05D000047 ORTHO05D000044 4.6e-16 89.4 223 28.3
CSS0007020 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000352 9.6e-14 81.6 223 26.5
CSS0009928 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000352 1.6e-13 80.9 201 27.4
CSS0012350 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000352 2.4e-12 77.0 227 26.9
Rhsim01G0144000 Rhododendron simsii HOM05D000047 ORTHO05D000044 4.0e-12 76.3 79 43.0
FAN09G2776 Fragaria x ananassa HOM05D025748 ORTHO05D014192 9.0e-12 75.1 43 81.4
RhsimUnG0112100 Rhododendron simsii HOM05D000047 ORTHO05D012208 3.4e-11 73.2 77 44.2
TWI12G0387 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 9.9e-11 71.6 80 41.2
TWI18G1375 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 9.9e-11 71.6 80 41.2
QL08p015689 Quercus lobata HOM05D000047 ORTHO05D000044 2.9e-10 70.1 93 38.7
FvH4_7g03661 Fragaria vesca HOM05D000047 ORTHO05D001383 6.4e-10 68.9 106 34.9
QL04p030580 Quercus lobata HOM05D000047 ORTHO05D000044 1.4e-09 67.8 106 35.8
Sabra16G0041700 Salix brachista HOM05D000047 ORTHO05D000044 1.9e-09 67.4 100 34.0
QL01p017897 Quercus lobata HOM05D000047 ORTHO05D000044 2.4e-09 67.0 93 37.6
QL06p007831 Quercus lobata HOM05D000047 ORTHO05D000044 2.4e-09 67.0 93 37.6
QL12p042854 Quercus lobata HOM05D000047 ORTHO05D000044 2.4e-09 67.0 93 37.6
QL93p0305_0012 Quercus lobata HOM05D000047 ORTHO05D000044 2.4e-09 67.0 93 37.6
QL06p019599 Quercus lobata HOM05D000047 ORTHO05D000044 7.1e-09 65.5 93 36.6
QL07p033814 Quercus lobata HOM05D000047 ORTHO05D000044 7.1e-09 65.5 93 36.6
QL93p0181_0006 Quercus lobata HOM05D000047 ORTHO05D000044 7.1e-09 65.5 93 36.6
FvH4_3g26703 Fragaria vesca HOM05D000047 ORTHO05D008839 9.3e-09 65.1 72 41.7
QL02p080030 Quercus lobata HOM05D000047 ORTHO05D000044 9.3e-09 65.1 93 36.6
QL02p080185 Quercus lobata HOM05D000047 ORTHO05D000044 9.3e-09 65.1 93 36.6
QL05p044848 Quercus lobata HOM05D000047 ORTHO05D000044 9.3e-09 65.1 95 36.8
Rhsim05G0112700 Rhododendron simsii HOM05D000981 ORTHO05D000845 9.3e-09 65.1 99 34.3
Sopen01g028490 Solanum pennellii HOM05D000047 ORTHO05D000044 9.3e-09 65.1 92 39.1
Sopen04g022080 Solanum pennellii HOM05D000047 ORTHO05D001383 9.3e-09 65.1 78 38.5
AUR62015267 Chenopodium quinoa HOM05D000047 ORTHO05D000044 2.7e-08 63.5 74 37.8
QL07p017311 Quercus lobata HOM05D000047 ORTHO05D000044 3.5e-08 63.2 93 36.6
AUR62027595 Chenopodium quinoa HOM05D000047 ORTHO05D000044 6.0e-08 62.4 88 35.2
Sopen04g011740 Solanum pennellii HOM05D000047 ORTHO05D000044 1.3e-07 61.2 111 34.2
Sopen06g014950 Solanum pennellii HOM05D000047 ORTHO05D001383 1.8e-07 60.8 80 35.0
Rhsim02G0166900 Rhododendron simsii HOM05D000047 ORTHO05D000352 3.0e-07 60.1 69 40.6
Rhsim07G0161100 Rhododendron simsii HOM05D008893 ORTHO05D001383 3.0e-07 60.1 79 35.4
Sopen06g013110 Solanum pennellii HOM05D000047 ORTHO05D000044 3.0e-07 60.1 78 35.9
Sopen10g006090 Solanum pennellii HOM05D000047 ORTHO05D001383 3.0e-07 60.1 78 35.9
TAR277G0001 Trochodendron aralioides HOM05D000047 ORTHO05D012208 3.9e-07 59.7 74 39.2
AUR62034228 Chenopodium quinoa HOM05D000047 ORTHO05D000044 5.1e-07 59.3 73 41.1
QL07p033801 Quercus lobata HOM05D000047 ORTHO05D000044 5.1e-07 59.3 57 47.4
Sopen07g006060 Solanum pennellii HOM05D000047 ORTHO05D000044 5.1e-07 59.3 78 35.9
Sopen03g014800 Solanum pennellii HOM05D000047 ORTHO05D000044 6.7e-07 58.9 78 35.9
Sopen03g021380 Solanum pennellii HOM05D000047 ORTHO05D000044 6.7e-07 58.9 78 35.9
Sopen04g012780 Solanum pennellii HOM05D000047 ORTHO05D001383 6.7e-07 58.9 78 35.9
Sopen04g021500 Solanum pennellii HOM05D000047 ORTHO05D001383 6.7e-07 58.9 78 35.9
Sopen05g008560 Solanum pennellii HOM05D000047 ORTHO05D001383 6.7e-07 58.9 78 35.9
Sopen05g018330 Solanum pennellii HOM05D000047 ORTHO05D000044 6.7e-07 58.9 78 35.9
Sopen06g006810 Solanum pennellii HOM05D000047 ORTHO05D001383 6.7e-07 58.9 78 35.9
Sopen06g006910 Solanum pennellii HOM05D000047 ORTHO05D001383 6.7e-07 58.9 82 34.1
Sopen06g009330 Solanum pennellii HOM05D000047 ORTHO05D000044 6.7e-07 58.9 78 35.9
Sopen06g011440 Solanum pennellii HOM05D000047 ORTHO05D000044 6.7e-07 58.9 78 35.9
Sopen08g020970 Solanum pennellii HOM05D000047 ORTHO05D000044 6.7e-07 58.9 78 35.9
Sopen10g021270 Solanum pennellii HOM05D000047 ORTHO05D001383 6.7e-07 58.9 78 35.9
Sopen12g021700 Solanum pennellii HOM05D000047 ORTHO05D000044 6.7e-07 58.9 78 35.9
Sopen01g029240 Solanum pennellii HOM05D000047 ORTHO05D000044 8.7e-07 58.5 85 32.9
Sopen07g020380 Solanum pennellii HOM05D000047 ORTHO05D001383 8.7e-07 58.5 111 31.5
CSS0022071 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D012208 1.1e-06 58.2 55 47.3
Sopen05g013390 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-06 57.8 77 36.4
Sopen10g017260 Solanum pennellii HOM05D000047 ORTHO05D000044 1.5e-06 57.8 87 27.6
Sopen03g024220 Solanum pennellii HOM05D000047 ORTHO05D001383 1.9e-06 57.4 80 33.8
Sopen08g007090 Solanum pennellii HOM05D000047 ORTHO05D001383 1.9e-06 57.4 80 33.8
Sopen03g024900 Solanum pennellii HOM05D000047 ORTHO05D001383 2.5e-06 57.0 78 34.6
Sopen09g023240 Solanum pennellii HOM05D000047 ORTHO05D000044 2.5e-06 57.0 78 34.6
AUR62037975 Chenopodium quinoa HOM05D000047 ORTHO05D000044 3.3e-06 56.6 72 37.5
Sopen01g008330 Solanum pennellii HOM05D000047 ORTHO05D001383 3.3e-06 56.6 78 33.3
Sopen01g018390 Solanum pennellii HOM05D000047 ORTHO05D000044 3.3e-06 56.6 78 35.9
Sopen02g008560 Solanum pennellii HOM05D000047 ORTHO05D000044 3.3e-06 56.6 85 31.8
Sopen11g023900 Solanum pennellii HOM05D000047 ORTHO05D001383 3.3e-06 56.6 73 35.6
CSS0008824 Camellia sinensis var. sinensis HOM05D012576 ORTHO05D012208 4.3e-06 56.2 40 55.0
Sopen01g019760 Solanum pennellii HOM05D000047 ORTHO05D000044 4.3e-06 56.2 78 35.9
Sopen12g011840 Solanum pennellii HOM05D000047 ORTHO05D000044 4.3e-06 56.2 101 33.7
CSS0026534 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000352 5.6e-06 55.8 69 39.1
ClCG10G007190 Citrullus lanatus HOM05D000047 ORTHO05D000044 5.6e-06 55.8 88 30.7
Sopen01g006520 Solanum pennellii HOM05D000047 ORTHO05D001383 5.6e-06 55.8 78 34.6
Sopen09g024050 Solanum pennellii HOM05D000047 ORTHO05D001383 5.6e-06 55.8 78 34.6
CSS0006092 Camellia sinensis var. sinensis HOM05D012576 ORTHO05D012208 7.4e-06 55.5 40 55.0
CSS0017336 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D000352 7.4e-06 55.5 59 44.1
CSS0021163 Camellia sinensis var. sinensis HOM05D012576 ORTHO05D012208 7.4e-06 55.5 40 52.5
CSS0032392 Camellia sinensis var. sinensis HOM05D012576 ORTHO05D012208 7.4e-06 55.5 87 36.8
FvH4_5g22540 Fragaria vesca HOM05D000047 ORTHO05D000044 7.4e-06 55.5 70 38.6
Sopen06g017160 Solanum pennellii HOM05D000047 ORTHO05D001383 7.4e-06 55.5 70 37.1
CSS0015013 Camellia sinensis var. sinensis HOM05D012576 ORTHO05D012208 9.6e-06 55.1 40 52.5
CSS0048919 Camellia sinensis var. sinensis HOM05D012576 ORTHO05D012208 9.6e-06 55.1 61 42.6
Sopen05g020260 Solanum pennellii HOM05D000047 ORTHO05D000044 9.6e-06 55.1 78 34.6
Sopen12g013560 Solanum pennellii HOM05D000047 ORTHO05D001383 9.6e-06 55.1 78 34.6


User provided reference genes

Program Settings