Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 4.2e-72 274.6 142 100.0
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 6.2e-68 260.8 150 92.7
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 9.7e-61 236.9 141 90.8
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 3.7e-52 208.4 142 80.3
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 3.8e-49 198.4 100 100.0
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 1.6e-47 193.0 100 97.0
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 1.3e-36 156.8 91 81.3
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 1.7e-36 156.4 92 80.4
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 1.7e-36 156.4 93 79.6
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 2.2e-36 156.0 92 79.3
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 2.8e-36 155.6 92 82.6
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 3.7e-36 155.2 92 81.5
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 4.8e-36 154.8 91 80.2
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 6.3e-36 154.5 92 79.3
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 1.1e-35 153.7 88 86.4
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 1.8e-35 152.9 92 79.3
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 3.1e-35 152.1 92 76.1
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 3.1e-35 152.1 92 76.1
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 3.1e-35 152.1 93 76.3
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 4.1e-35 151.8 92 77.2
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 5.3e-35 151.4 90 80.0
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 7.0e-35 151.0 92 78.3
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 7.0e-35 151.0 92 78.3
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 7.0e-35 151.0 115 66.1
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 7.0e-35 151.0 93 77.4
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 7.0e-35 151.0 92 76.1
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 1.2e-34 150.2 92 78.3
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 2.0e-34 149.4 90 78.9
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 2.0e-34 149.4 92 77.2
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 2.0e-34 149.4 94 75.5
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 2.0e-34 149.4 92 78.3
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 2.6e-34 149.1 93 76.3
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 2.6e-34 149.1 92 75.0
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 2.6e-34 149.1 90 77.8
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 3.5e-34 148.7 88 78.4
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 3.5e-34 148.7 92 76.1
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 3.5e-34 148.7 92 76.1
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 1.0e-33 147.1 89 75.3
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 1.7e-33 146.4 93 74.2
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 1.7e-33 146.4 88 79.5
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 1.7e-33 146.4 92 77.2
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 1.7e-33 146.4 88 80.7
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 1.7e-33 146.4 90 74.4
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 3.8e-33 145.2 88 76.1
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 3.8e-33 145.2 89 74.2
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 3.8e-33 145.2 92 76.1
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 5.0e-33 144.8 91 75.8
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 5.0e-33 144.8 92 76.1
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 6.5e-33 144.4 90 76.7
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 8.5e-33 144.1 88 77.3
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 1.1e-32 143.7 88 79.5
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 1.1e-32 143.7 90 74.4
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 1.5e-32 143.3 88 76.1
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 1.9e-32 142.9 86 81.4
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 1.9e-32 142.9 92 72.8
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 2.5e-32 142.5 89 74.2
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 3.2e-32 142.1 90 74.4
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 4.2e-32 141.7 92 70.7
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 4.2e-32 141.7 82 79.3
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 4.2e-32 141.7 92 72.8
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 4.2e-32 141.7 88 76.1
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 7.2e-32 141.0 92 71.7
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 9.4e-32 140.6 88 75.0
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 1.2e-31 140.2 88 76.1
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 1.2e-31 140.2 88 75.0
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 1.6e-31 139.8 92 71.7
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 2.1e-31 139.4 86 79.1
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 2.7e-31 139.0 92 70.7
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 2.7e-31 139.0 92 70.7
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 6.1e-31 137.9 88 75.0
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 8.0e-31 137.5 88 73.9
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 8.0e-31 137.5 88 73.9
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 8.0e-31 137.5 84 79.8
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 8.0e-31 137.5 90 72.2
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 1.0e-30 137.1 86 74.4
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 1.0e-30 137.1 86 74.4
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 1.0e-30 137.1 86 74.4
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 1.4e-30 136.7 89 73.0
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 1.4e-30 136.7 92 69.6
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 1.8e-30 136.3 91 70.3
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 2.3e-30 136.0 88 75.0
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 5.2e-30 134.8 92 68.5
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 1.1e-27 127.1 126 54.0
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 1.8e-27 126.3 75 78.7
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 2.0e-26 122.9 69 82.6
PGSC0003DMG400024179 Solanum tuberosum HOM05D007149 ORTHO05D008956 7.7e-26 120.9 76 73.7
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 1.7e-25 119.8 68 82.4
Prupe.3G238900 Prunus persica HOM05D007149 ORTHO05D008956 3.8e-25 118.6 69 81.2
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 1.5e-24 116.7 67 80.6
arahy.Tifrunner.gnm1.ann1.2T9F1Z Arachis hypogaea HOM05D007149 ORTHO05D008956 3.2e-24 115.5 80 68.8
arahy.Tifrunner.gnm1.ann1.HVR4ZG Arachis hypogaea HOM05D007149 ORTHO05D008956 3.2e-24 115.5 80 68.8
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 3.2e-24 115.5 66 84.8
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 3.2e-24 115.5 150 45.3
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 3.2e-24 115.5 72 72.2
Aa31LG2G17140 Aethionema arabicum HOM05D007149 ORTHO05D008956 9.4e-24 114.0 76 67.1
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 2.7e-23 112.5 74 67.6
SalBow6G3599 Salvia bowleyana HOM05D007149 ORTHO05D008956 2.7e-23 112.5 67 77.6
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 3.6e-23 112.1 68 73.5
Sopen02g014160 Solanum pennellii HOM05D007149 ORTHO05D008956 4.7e-23 111.7 69 73.9
AUR62014527 Chenopodium quinoa HOM05D007149 ORTHO05D008956 1.2e-21 107.1 69 69.6
Carub.0055s0008 Capsella rubella HOM05D007149 ORTHO05D008956 7.5e-21 104.4 65 73.8
RcHm_v2.0_Chr2g0163021 Rosa chinensis HOM05D007149 ORTHO05D008956 9.8e-21 104.0 67 83.6
AagrBONN_evm.TU.Sc2ySwM_228.1220 Anthoceros agrestis HOM05D007149 ORTHO05D008956 1.3e-20 103.6 82 54.9
ECA246G4376 Erigeron canadensis HOM05D007149 ORTHO05D008956 4.8e-20 101.7 65 70.8
Pp3c20_17910 Physcomitrium patens HOM05D007149 ORTHO05D008956 5.4e-19 98.2 88 54.5
SMO356G0237 Selaginella moellendorffii HOM05D007149 ORTHO05D008956 5.0e-17 91.7 77 55.8
Mapoly0073s0075 Marchantia polymorpha HOM05D007149 ORTHO05D008956 2.1e-15 86.3 65 56.9
Nitab4.5_0002288g0070 Nicotiana tabacum HOM05D007149 ORTHO05D008956 1.5e-13 80.1 91 50.5
SGA_v2.0_scaffold33G13472 Striga asiatica HOM05D007149 ORTHO05D008956 2.8e-12 75.9 45 71.1
MCO15G246 Micromonas commoda HOM05D007149 ORTHO05D008956 1.0e-09 67.4 71 43.7
PRCOL_00003753 Prasinoderma coloniale HOM05D007149 ORTHO05D008956 3.8e-09 65.5 78 42.3


User provided reference genes

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