Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G4720 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.6e-96 354.0 172 100.0
FvH4_6g40891 Fragaria vesca HOM05D001729 ORTHO05D001155 5.0e-80 301.2 157 94.9
FvH4_6g40892 Fragaria vesca HOM05D001729 ORTHO05D001155 9.2e-66 253.8 157 80.3
MD05G1324200 Malus domestica HOM05D001729 ORTHO05D001155 7.4e-15 84.7 145 33.8
RcHm_v2.0_Chr3g0450211 Rosa chinensis HOM05D001729 ORTHO05D001155 3.7e-14 82.4 162 35.2
FAN14G4260 Fragaria x ananassa HOM05D020628 ORTHO05D025339 4.8e-14 82.0 139 43.2
FAN08G1373 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.4e-13 80.5 174 39.7
FAN14G3193 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.4e-13 79.7 133 34.6
Prupe.1G509300 Prunus persica HOM05D001729 ORTHO05D001155 3.1e-13 79.3 154 39.6
Prupe.6G075500 Prunus persica HOM05D001729 ORTHO05D001155 3.1e-13 79.3 139 38.8
FAN02G2474 Fragaria x ananassa HOM05D020628 ORTHO05D001155 4.1e-13 79.0 148 40.5
FAN18G1542 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.3e-13 78.6 174 38.5
FAN18G4057 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.3e-13 78.6 174 38.5
FAN09G4239 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.9e-13 78.2 150 40.7
FvH4_3g35490 Fragaria vesca HOM05D001729 ORTHO05D001155 9.1e-13 77.8 162 37.0
FAN11G0139 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.2e-12 77.4 158 36.7
FvH4_6g03221 Fragaria vesca HOM05D001729 ORTHO05D001155 1.5e-12 77.0 150 40.0
FvH4_6g45890 Fragaria vesca HOM05D001729 ORTHO05D001155 2.6e-12 76.3 133 33.8
FAN02G3094 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.6e-12 76.3 133 34.6
FAN05G2911 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.6e-12 76.3 133 34.6
FAN09G3613 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.6e-12 76.3 165 37.6
Prupe.3G059500 Prunus persica HOM05D001729 ORTHO05D001155 2.6e-12 76.3 135 40.0
FAN19G1733 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.5e-12 75.5 155 34.2
FAN02G4556 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.7e-12 74.7 166 34.3
RcHm_v2.0_Chr7g0221261 Rosa chinensis HOM05D001729 ORTHO05D001155 7.7e-12 74.7 132 41.7
FAN05G0208 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.0e-11 74.3 161 36.0
FAN09G2884 Fragaria x ananassa HOM05D020628 ORTHO05D001155 1.0e-11 74.3 121 45.5
RcHm_v2.0_Chr2g0123691 Rosa chinensis HOM05D001729 ORTHO05D001155 1.0e-11 74.3 136 39.7
Prupe.1G510700 Prunus persica HOM05D001729 ORTHO05D001155 1.3e-11 73.9 154 39.0
FvH4_4g31310 Fragaria vesca HOM05D001729 ORTHO05D001155 2.9e-11 72.8 154 37.7
FAN21G1715 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.9e-11 72.8 155 38.7
Prupe.4G034700 Prunus persica HOM05D001729 ORTHO05D001155 2.9e-11 72.8 155 32.3
FAN05G3901 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.8e-11 72.4 161 36.6
FAN21G1312 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.8e-11 72.4 143 39.2
FAN09G2508 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.0e-11 72.0 161 36.6
FAN13G3182 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.0e-11 72.0 152 38.2
FvH4_6g39371 Fragaria vesca HOM05D001729 ORTHO05D001155 6.5e-11 71.6 133 35.3
MD09G1201600 Malus domestica HOM05D001729 ORTHO05D001155 8.5e-11 71.2 137 36.5
MD03G1256400 Malus domestica HOM05D001729 ORTHO05D001155 1.1e-10 70.9 154 35.1
Prupe.8G110700 Prunus persica HOM05D001729 ORTHO05D001155 1.1e-10 70.9 166 31.3
FvH4_2g19920 Fragaria vesca HOM05D001729 ORTHO05D001155 1.4e-10 70.5 142 38.0
FAN24G2147 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.4e-10 70.5 142 38.0
BcaB01g00375 Brassica carinata HOM05D000171 ORTHO05D000101 1.9e-10 70.1 152 33.6
FAN09G2757 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.9e-10 70.1 133 34.6
FAN14G1727 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.9e-10 70.1 133 34.6
FAN02G2750 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.5e-10 69.7 157 35.7
FAN06G3932 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.5e-10 69.7 147 37.4
MD05G1244200 Malus domestica HOM05D001729 ORTHO05D001155 2.5e-10 69.7 157 36.3
Prupe.1G509700 Prunus persica HOM05D001729 ORTHO05D001155 2.5e-10 69.7 150 35.3
FvH4_6g45291 Fragaria vesca HOM05D001729 ORTHO05D001155 3.2e-10 69.3 152 36.8
FAN11G1727 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.2e-10 69.3 140 39.3
FAN14G0421 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.2e-10 69.3 152 36.8
FAN16G2506 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.2e-10 69.3 140 39.3
MD02G1008900 Malus domestica HOM05D001729 ORTHO05D001155 3.2e-10 69.3 144 35.4
MD14G1187900 Malus domestica HOM05D001729 ORTHO05D001155 4.2e-10 68.9 149 33.6
FvH4_3g43730 Fragaria vesca HOM05D001729 ORTHO05D001155 5.5e-10 68.6 131 42.0
FvH4_3g44510 Fragaria vesca HOM05D001729 ORTHO05D001155 5.5e-10 68.6 140 38.6
RcHm_v2.0_Chr2g0163051 Rosa chinensis HOM05D001729 ORTHO05D001155 5.5e-10 68.6 138 37.7
FAN15G1054 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.2e-10 68.2 142 37.3
FvH4_1g02011 Fragaria vesca HOM05D001729 ORTHO05D001155 9.4e-10 67.8 161 36.6
FAN14G0370 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.4e-10 67.8 165 33.9
FAN14G1791 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.4e-10 67.8 152 34.9
RcHm_v2.0_Chr6g0276071 Rosa chinensis HOM05D001729 ORTHO05D001155 9.4e-10 67.8 135 39.3
FvH4_6g46241 Fragaria vesca HOM05D001729 ORTHO05D001155 1.2e-09 67.4 158 34.2
RcHm_v2.0_Chr1g0380481 Rosa chinensis HOM05D001729 ORTHO05D001155 1.2e-09 67.4 140 36.4
FvH4_3g44471 Fragaria vesca HOM05D001729 ORTHO05D001155 1.6e-09 67.0 151 38.4
FAN14G1187 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.6e-09 67.0 165 32.7
FAN14G2874 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.6e-09 67.0 165 32.7
FAN16G0249 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.6e-09 67.0 151 38.4
Prupe.3G246100 Prunus persica HOM05D001729 ORTHO05D001155 1.6e-09 67.0 182 33.5
FAN02G0583 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.1e-09 66.6 161 36.0
FAN19G0745 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.1e-09 66.6 161 36.6
RcHm_v2.0_Chr2g0151111 Rosa chinensis HOM05D001729 ORTHO05D001155 2.1e-09 66.6 171 33.3
RcHm_v2.0_Chr5g0081211 Rosa chinensis HOM05D001729 ORTHO05D001155 2.1e-09 66.6 160 34.4
FvH4_6g01541 Fragaria vesca HOM05D001729 ORTHO05D001155 3.6e-09 65.9 166 31.9
FAN14G0866 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.6e-09 65.9 172 36.0
MD02G1008700 Malus domestica HOM05D001729 ORTHO05D001155 3.6e-09 65.9 149 35.6
RcHm_v2.0_Chr3g0457271 Rosa chinensis HOM05D001729 ORTHO05D001155 3.6e-09 65.9 150 37.3
FvH4_6g03380 Fragaria vesca HOM05D001729 ORTHO05D001155 4.7e-09 65.5 149 37.6
FAN05G5452 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.7e-09 65.5 152 36.8
FAN14G3624 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.1e-09 65.1 149 36.9
FAN14G3807 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.1e-09 65.1 171 33.3
FAN14G5781 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.1e-09 65.1 162 34.6
RcHm_v2.0_Chr6g0285591 Rosa chinensis HOM05D001729 ORTHO05D001155 6.1e-09 65.1 158 32.9
FAN24G2684 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.0e-09 64.7 162 33.3
FvH4_6g46242 Fragaria vesca HOM05D001729 ORTHO05D001155 1.0e-08 64.3 165 32.7
Prupe.1G512600 Prunus persica HOM05D001729 ORTHO05D001155 1.0e-08 64.3 151 37.7
FvH4_2g30622 Fragaria vesca HOM05D001729 ORTHO05D001155 1.4e-08 63.9 175 30.9
FvH4_4g18120 Fragaria vesca HOM05D001729 ORTHO05D001155 1.4e-08 63.9 152 34.2
FvH4_6g02171 Fragaria vesca HOM05D001729 ORTHO05D001155 1.4e-08 63.9 143 32.2
FAN05G4264 Fragaria x ananassa HOM05D001526 ORTHO05D001417 1.4e-08 63.9 163 36.2
FAN06G0177 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.4e-08 63.9 147 36.7
FAN12G2308 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.8e-08 63.5 152 34.2
FAN16G1493 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.8e-08 63.5 163 36.8
FAN26G1025 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.8e-08 63.5 153 34.6
Prupe.3G059600 Prunus persica HOM05D001729 ORTHO05D001155 1.8e-08 63.5 161 34.2
FAN14G2668 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.3e-08 63.2 130 37.7
FAN05G4861 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.0e-08 62.8 161 32.9
RcHm_v2.0_Chr5g0021011 Rosa chinensis HOM05D001729 ORTHO05D001155 3.0e-08 62.8 141 34.8
FAN07G1354 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.9e-08 62.4 153 32.7
RcHm_v2.0_Chr2g0164721 Rosa chinensis HOM05D001729 ORTHO05D001155 3.9e-08 62.4 168 32.1
FvH4_4g16921 Fragaria vesca HOM05D001729 ORTHO05D001155 5.2e-08 62.0 153 32.7
FAN12G2239 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.2e-08 62.0 153 32.7
RcHm_v2.0_Chr6g0275871 Rosa chinensis HOM05D001729 ORTHO05D001155 5.2e-08 62.0 135 38.5
FvH4_3g44582 Fragaria vesca HOM05D001729 ORTHO05D001155 6.7e-08 61.6 156 35.9
Prupe.4G052100 Prunus persica HOM05D001729 ORTHO05D001155 8.8e-08 61.2 172 29.7
RcHm_v2.0_Chr2g0164671 Rosa chinensis HOM05D001729 ORTHO05D001155 8.8e-08 61.2 144 36.8
FvH4_6g46280 Fragaria vesca HOM05D001729 ORTHO05D001155 1.1e-07 60.8 142 36.6
FAN07G0163 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.5e-07 60.5 151 31.8
MD14G1026900 Malus domestica HOM05D001729 ORTHO05D001155 1.5e-07 60.5 135 32.6
FAN02G0048 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.0e-07 60.1 168 34.5
RcHm_v2.0_Chr2g0163011 Rosa chinensis HOM05D001729 ORTHO05D001155 2.0e-07 60.1 226 27.9
RcHm_v2.0_Chr6g0291931 Rosa chinensis HOM05D001729 ORTHO05D001155 2.0e-07 60.1 165 29.7
Prupe.4G053600 Prunus persica HOM05D001729 ORTHO05D001155 3.3e-07 59.3 165 32.7
RcHm_v2.0_Chr2g0089331 Rosa chinensis HOM05D001729 ORTHO05D001155 4.4e-07 58.9 150 36.0
FAN02G2194 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.7e-07 58.5 170 31.2
FAN11G2795 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.7e-07 58.5 165 36.4
FAN11G3734 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.7e-07 58.5 165 36.4
MD04G1180900 Malus domestica HOM05D001729 ORTHO05D001155 5.7e-07 58.5 134 35.1
Aa31LG6G12210 Aethionema arabicum HOM05D000171 ORTHO05D000101 7.4e-07 58.2 150 28.0
FAN09G1958 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.4e-07 58.2 128 35.2
FAN08G2539 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.7e-07 57.8 149 32.9
FAN25G0589 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.3e-06 57.4 72 45.8
PSO063G2656 Papaver somniferum HOM05D008326 ORTHO05D001155 1.3e-06 57.4 151 27.8
Psat6g222080 Pisum sativum HOM05D000007 ORTHO05D000017 1.3e-06 57.4 152 27.0
FvH4_3g43770 Fragaria vesca HOM05D001729 ORTHO05D001155 1.7e-06 57.0 164 34.1
RcHm_v2.0_Chr6g0292271 Rosa chinensis HOM05D001729 ORTHO05D001155 2.2e-06 56.6 158 32.9
PSO161G0051 Papaver somniferum HOM05D008326 ORTHO05D001155 2.8e-06 56.2 144 30.6
QL05p008212 Quercus lobata HOM05D001729 ORTHO05D001155 4.8e-06 55.5 151 32.5
RcHm_v2.0_Chr5g0018111 Rosa chinensis HOM05D001729 ORTHO05D001155 4.8e-06 55.5 164 31.7
CARHR029970 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.3e-06 55.1 124 31.5
Thecc.04G270500 Theobroma cacao HOM05D000007 ORTHO05D000017 6.3e-06 55.1 130 30.8
Aa31LG6G10630 Aethionema arabicum HOM05D000171 ORTHO05D000101 8.2e-06 54.7 138 31.9
PSO384G0013 Papaver somniferum HOM05D008326 ORTHO05D001155 8.2e-06 54.7 145 26.9
Sed0013342 Sechium edule HOM05D021455 ORTHO05D010440 8.2e-06 54.7 156 30.1


User provided reference genes

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