Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G4693 Fragaria x ananassa HOM05D007472 ORTHO05D009477 1.9e-153 545.8 278 100.0
RcHm_v2.0_Chr2g0168671 Rosa chinensis HOM05D007472 ORTHO05D009477 3.2e-52 209.5 207 58.0
FAN02G3469 Fragaria x ananassa HOM05D007472 ORTHO05D009477 5.3e-47 192.2 206 53.9
FvH4_6g48800 Fragaria vesca HOM05D007472 ORTHO05D009477 3.5e-46 189.5 205 53.7
FAN05G4432 Fragaria x ananassa HOM05D007472 ORTHO05D009477 7.7e-46 188.3 206 53.4
FAN09G3065 Fragaria x ananassa HOM05D007472 ORTHO05D009477 3.8e-45 186.0 206 52.9
FvH4_6g49030 Fragaria vesca HOM05D007472 ORTHO05D009477 2.6e-33 146.7 175 50.9
FvH4_1g02370 Fragaria vesca HOM05D007472 ORTHO05D009477 5.7e-33 145.6 191 50.3
RcHm_v2.0_Chr2g0170071 Rosa chinensis HOM05D007472 ORTHO05D009477 6.3e-32 142.1 139 58.3
FAN14G2920 Fragaria x ananassa HOM05D007472 ORTHO05D009477 1.8e-31 140.6 175 49.1
FAN14G5380 Fragaria x ananassa HOM05D007472 ORTHO05D009477 2.5e-28 130.2 130 60.0
FAN02G2172 Fragaria x ananassa HOM05D051017 ORTHO05D009477 8.3e-24 115.2 58 93.1
Prupe.3G268600 Prunus persica HOM05D007472 ORTHO05D009477 7.3e-20 102.1 202 39.1
Haze_14546 Corylus avellana HOM05D007472 ORTHO05D009477 1.2e-19 101.3 207 36.2
CANSAT64G0327 Cannabis sativa HOM05D007472 ORTHO05D009477 1.0e-18 98.2 197 37.1
QL04p014916 Quercus lobata HOM05D007472 ORTHO05D009477 1.8e-18 97.4 206 34.5
QL04p014554 Quercus lobata HOM05D007472 ORTHO05D009477 3.1e-18 96.7 206 35.0
Cfa007540 Carpinus fangiana HOM05D007472 ORTHO05D009477 6.8e-18 95.5 206 35.9
CiPaw.03G027700 Carya illinoinensis HOM05D007472 ORTHO05D009477 7.5e-17 92.0 198 36.9
RcHm_v2.0_Chr6g0246241 Rosa chinensis HOM05D007472 ORTHO05D009477 7.5e-17 92.0 107 57.0
GSVIVG01011394001 Vitis vinifera HOM05D007472 ORTHO05D009477 7.5e-17 92.0 159 37.1
Cpa.g.sc1057.1 Carica papaya HOM05D007472 ORTHO05D009477 9.2e-15 85.1 201 32.8
MD09G1050300 Malus domestica HOM05D007472 ORTHO05D009477 9.2e-15 85.1 202 37.1
TWI60G0556 Tripterygium wilfordii HOM05D007472 ORTHO05D009477 1.5e-12 77.8 214 30.4
Gohir.A07G205200 Gossypium hirsutum HOM05D007472 ORTHO05D009477 2.1e-11 73.9 193 31.6
Ciclev10011009m.g Citrus clementina HOM05D007472 ORTHO05D009477 4.7e-11 72.8 211 30.8
Duzib147G0661 Durio zibethinus HOM05D007472 ORTHO05D009477 4.7e-11 72.8 206 30.1
CDE04G1619 Ceratophyllum demersum HOM05D007472 ORTHO05D009477 6.2e-11 72.4 168 33.9
Gohir.D07G211400 Gossypium hirsutum HOM05D007472 ORTHO05D009477 8.0e-11 72.0 193 31.1
Gorai.001G238800 Gossypium raimondii HOM05D007472 ORTHO05D009477 1.4e-10 71.2 193 31.1
Manes.01G090001 Manihot esculenta HOM05D007472 ORTHO05D009477 1.4e-10 71.2 115 40.0
Thecc.04G080300 Theobroma cacao HOM05D007472 ORTHO05D009477 1.4e-10 71.2 206 30.1
PGR142G1798 Punica granatum HOM05D007472 ORTHO05D009477 4.0e-10 69.7 194 30.4
MBI14_g12118_MAGBIO Magnolia biondii HOM05D007472 ORTHO05D009477 5.2e-10 69.3 190 28.4
Nn3g17438 Nelumbo nucifera HOM05D007472 ORTHO05D009477 6.8e-10 68.9 203 29.6
Aqoxy1G01920 Aquilegia oxysepala HOM05D007472 ORTHO05D009477 8.9e-10 68.6 178 32.6
THA.LOC104805462 Tarenaya hassleriana HOM05D007472 ORTHO05D009477 8.9e-10 68.6 125 40.0
Atru.chr8.142 Acer truncatum HOM05D007472 ORTHO05D009477 3.4e-09 66.6 191 29.3
Potri.004G129100 Populus trichocarpa HOM05D007472 ORTHO05D009477 7.5e-09 65.5 229 27.9
Mapoly0163s0008 Marchantia polymorpha HOM05D007472 ORTHO05D009477 1.7e-08 64.3 216 28.7
EL10Ac2g02974 Beta vulgaris HOM05D007472 ORTHO05D009477 2.2e-08 63.9 216 28.7
Aa31LG2G4320 Aethionema arabicum HOM05D007472 ORTHO05D009477 3.7e-08 63.2 123 36.6
TAR622G0195 Trochodendron aralioides HOM05D007472 ORTHO05D009477 6.4e-08 62.4 173 31.8
SEGI_07251 Sequoiadendron giganteum HOM05D007472 ORTHO05D009477 1.1e-07 61.6 186 28.5
SHI06832 Sapria himalayana HOM05D007472 ORTHO05D000001 1.9e-07 60.8 92 42.4
AL5G18670 Arabidopsis lyrata HOM05D007472 ORTHO05D009477 3.2e-07 60.1 109 36.7
AUR62034398 Chenopodium quinoa HOM05D007472 ORTHO05D009477 7.1e-07 58.9 199 28.6
Pp3c3_9890 Physcomitrium patens HOM05D007472 ORTHO05D009477 9.2e-07 58.5 129 33.3
CBR_g32589 Chara braunii HOM05D007472 ORTHO05D009477 1.6e-06 57.8 75 41.3
Mapoly0213s0013 Marchantia polymorpha HOM05D007472 ORTHO05D009477 1.6e-06 57.8 203 27.6
Carub.0005s0743 Capsella rubella HOM05D007472 ORTHO05D009477 2.7e-06 57.0 107 35.5
AUR62039817 Chenopodium quinoa HOM05D007472 ORTHO05D009477 3.5e-06 56.6 83 38.6
Zm00001eb029370 Zea mays HOM05D007472 ORTHO05D009477 6.0e-06 55.8 165 27.3
ATR0037G017 Amborella trichopoda HOM05D007472 ORTHO05D009477 7.8e-06 55.5 198 29.8
BraA02t08613Z Brassica rapa HOM05D007472 ORTHO05D009477 7.8e-06 55.5 91 36.3


User provided reference genes

Program Settings