Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G4686 Fragaria x ananassa HOM05D000045 ORTHO05D011270 1.9e-89 332.4 164 100.0
FAN07G1780 Fragaria x ananassa HOM05D000045 ORTHO05D011270 3.6e-27 125.6 80 73.8
Rhsim02G0156000 Rhododendron simsii HOM05D000045 ORTHO05D000067 6.8e-26 121.3 165 43.6
Rhsim07G0159000 Rhododendron simsii HOM05D000045 ORTHO05D000067 4.6e-22 108.6 206 36.4
Rhsim10G0159200 Rhododendron simsii HOM05D000045 ORTHO05D000067 4.6e-22 108.6 200 36.0
Rhsim08G0146600 Rhododendron simsii HOM05D000045 ORTHO05D000067 6.0e-22 108.2 208 35.1
Rhsim07G0160800 Rhododendron simsii HOM05D000045 ORTHO05D000067 7.8e-22 107.8 206 34.5
Rhsim05G0139300 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.3e-21 107.1 206 35.0
RcHm_v2.0_Chr4g0405981 Rosa chinensis HOM05D000045 ORTHO05D000067 1.3e-21 107.1 208 34.1
Rhsim05G0121900 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.3e-21 106.3 206 34.5
RhsimUnG0116300 Rhododendron simsii HOM05D000045 ORTHO05D000067 8.6e-21 104.4 211 33.2
FvH4_2g03921 Fragaria vesca HOM05D000045 ORTHO05D000067 1.5e-20 103.6 208 33.7
Rhsim01G0113700 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.5e-20 102.8 210 34.8
Rhsim02G0105500 Rhododendron simsii HOM05D000045 ORTHO05D010036 2.5e-20 102.8 177 37.3
Atru.chr4.2343 Acer truncatum HOM05D000045 ORTHO05D000067 3.3e-20 102.4 196 33.7
Rhsim03G0080900 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.3e-20 102.4 180 36.7
Rhsim05G0048700 Rhododendron simsii HOM05D000045 ORTHO05D000067 4.3e-20 102.1 210 34.3
RhsimUnG0196300 Rhododendron simsii HOM05D000045 ORTHO05D000067 4.3e-20 102.1 210 34.3
Rhsim05G0121500 Rhododendron simsii HOM05D000045 ORTHO05D000067 7.3e-20 101.3 206 32.0
Rhsim11G0003900 Rhododendron simsii HOM05D000045 ORTHO05D000067 9.5e-20 100.9 210 34.3
Rhsim04G0171600 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.2e-19 100.5 211 31.8
Rhsim08G0139400 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.1e-19 99.8 200 33.0
Rhsim02G0171700 Rhododendron simsii HOM05D000045 ORTHO05D000067 6.2e-19 98.2 205 33.2
Aqoxy3G00990 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.4e-18 97.1 204 35.3
Atru.chr4.2354 Acer truncatum HOM05D000045 ORTHO05D000067 3.1e-18 95.9 196 32.7
Aqoxy4G01093 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.5e-17 93.6 204 34.3
Rhsim02G0163600 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.0e-17 93.2 195 32.8
TWI14G0214 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.0e-17 93.2 213 32.4
FvH4_6g21931 Fragaria vesca HOM05D000045 ORTHO05D000067 2.6e-17 92.8 154 39.0
Rhsim01G0177800 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.6e-17 92.8 195 32.8
Rhsim06G0088300 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.4e-17 92.4 208 33.2
Rhsim09G0160500 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.4e-17 92.4 202 33.2
TWI56G0811 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.4e-17 92.0 213 31.9
TWI53G1228 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 5.8e-17 91.7 213 31.5
Rhsim09G0033300 Rhododendron simsii HOM05D000045 ORTHO05D000067 9.9e-17 90.9 190 34.2
TWI53G2134 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 9.9e-17 90.9 216 32.4
Rhsim09G0080800 Rhododendron simsii HOM05D000045 ORTHO05D011270 3.8e-16 89.0 208 31.7
Rhsim04G0129100 Rhododendron simsii HOM05D000045 ORTHO05D000067 4.9e-16 88.6 190 34.2
Rhsim08G0163800 Rhododendron simsii HOM05D000045 ORTHO05D000067 4.9e-16 88.6 192 34.9
TWI31G1262 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.1e-15 87.4 211 30.8
TWI79G0465 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.1e-15 87.4 216 31.9
Rhsim05G0110700 Rhododendron simsii HOM05D000045 ORTHO05D011270 1.4e-15 87.0 186 32.8
TWI79G1218 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.9e-15 86.7 214 29.4
Rhsim11G0078300 Rhododendron simsii HOM05D000045 ORTHO05D011270 4.2e-15 85.5 208 31.7
Aqoxy7G02429 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 5.4e-15 85.1 204 33.3
Atru.chr3.2698 Acer truncatum HOM05D000045 ORTHO05D000067 1.6e-14 83.6 209 27.8
Aqoxy7G02431 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.6e-14 83.6 187 34.2
TWI73G0409 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.5e-14 82.4 164 32.9
Ciclev10013881m.g Citrus clementina HOM05D000045 ORTHO05D000067 6.0e-14 81.6 208 31.2
Ciclev10024302m.g Citrus clementina HOM05D000045 ORTHO05D011270 1.7e-13 80.1 181 31.5
TWI74G0282 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 5.1e-13 78.6 205 30.2
TWI60G1709 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.5e-12 77.0 205 30.2
Rhsim13G0132100 Rhododendron simsii HOM05D000045 ORTHO05D010036 2.5e-12 76.3 63 60.3
vmacro19315 Vaccinium macrocarpon HOM05D000045 ORTHO05D014656 3.3e-12 75.9 68 54.4
CSS0007508 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.6e-11 72.4 213 25.8
CSS0016715 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.6e-11 72.4 213 25.8
Manes.02G117425 Manihot esculenta HOM05D000045 ORTHO05D000067 3.6e-11 72.4 216 25.9
Prupe.3G021400 Prunus persica HOM05D000045 ORTHO05D000611 3.6e-11 72.4 69 52.2
Rhsim07G0162100 Rhododendron simsii HOM05D017263 ORTHO05D020626 4.7e-11 72.0 73 50.7
TWI23G0032 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 6.2e-11 71.6 163 31.3
Rhsim06G0086700 Rhododendron simsii HOM05D000045 ORTHO05D010036 5.2e-10 68.6 69 47.8
Rhsim08G0142800 Rhododendron simsii HOM05D000002 ORTHO05D009184 5.2e-10 68.6 69 47.8
FvH4_3g29141 Fragaria vesca HOM05D000045 ORTHO05D021070 6.9e-10 68.2 174 29.3
TWI38G1028 Tripterygium wilfordii HOM05D000045 ORTHO05D000611 6.9e-10 68.2 69 49.3
Nn5g31066 Nelumbo nucifera HOM05D000045 ORTHO05D000067 9.0e-10 67.8 211 25.6
PSO170G0991 Papaver somniferum HOM05D000045 ORTHO05D000067 9.0e-10 67.8 215 25.6
Nn5g31065 Nelumbo nucifera HOM05D000045 ORTHO05D000067 1.2e-09 67.4 211 25.6
TWI14G1038 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.0e-09 66.6 83 45.8
PSO017G4008 Papaver somniferum HOM05D000045 ORTHO05D000067 4.4e-09 65.5 215 25.1
Rhsim10G0190800 Rhododendron simsii HOM05D000045 ORTHO05D000067 4.4e-09 65.5 214 24.3
TWI38G1085 Tripterygium wilfordii HOM05D000045 ORTHO05D011270 5.8e-09 65.1 69 44.9
Potri.011G145800 Populus trichocarpa HOM05D000045 ORTHO05D000067 1.3e-08 63.9 212 24.5
Hma1.2p1_0085F.1_g044300 Hydrangea macrophylla HOM05D000045 ORTHO05D000067 1.7e-08 63.5 219 26.0
Prupe.1G074100 Prunus persica HOM05D014194 ORTHO05D011270 1.7e-08 63.5 77 45.5
Prupe.7G188000 Prunus persica HOM05D000045 ORTHO05D000067 1.7e-08 63.5 213 24.4
Aqoxy4G01738 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 2.2e-08 63.2 75 48.0
Lalb_Chr09g0324891 Lupinus albus HOM05D000045 ORTHO05D000067 2.2e-08 63.2 209 23.4
Aqoxy1G02677 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 2.9e-08 62.8 210 24.8
Ciclev10024022m.g Citrus clementina HOM05D000045 ORTHO05D011270 2.9e-08 62.8 55 52.7
Lj2g0014388 Lotus japonicus HOM05D000045 ORTHO05D000067 3.8e-08 62.4 194 24.2
Hund06349 Selenicereus undatus HOM05D000045 ORTHO05D000067 3.8e-08 62.4 210 23.8
Sabra11G0130900 Salix brachista HOM05D000045 ORTHO05D000067 4.9e-08 62.0 212 24.1
SGA_v2.0_scaffold16G07519 Striga asiatica HOM05D011878 ORTHO05D011270 4.9e-08 62.0 75 42.7
Oeu064496.1 Olea europaea HOM05D000045 ORTHO05D011270 6.4e-08 61.6 74 44.6
Phvul.002G119401 Phaseolus vulgaris HOM05D000045 ORTHO05D000067 8.4e-08 61.2 195 24.1
Glyma.11G088700 Glycine max HOM05D000045 ORTHO05D000067 1.1e-07 60.8 195 24.1
MD15G1227300 Malus domestica HOM05D000045 ORTHO05D000067 1.1e-07 60.8 212 25.0
Oeu032610.1 Olea europaea HOM05D000045 ORTHO05D000611 1.1e-07 60.8 76 44.7
FvH4_3g37591 Fragaria vesca HOM05D017263 ORTHO05D020626 1.4e-07 60.5 69 43.5
Oeu041131.1 Olea europaea HOM05D000045 ORTHO05D011270 3.2e-07 59.3 86 41.9
Ciclev10033450m.g Citrus clementina HOM05D000045 ORTHO05D011270 4.2e-07 58.9 88 43.2
Rhsim07G0153000 Rhododendron simsii HOM05D000045 ORTHO05D000067 4.2e-07 58.9 37 67.6
SGA_v2.0_scaffold185G40051 Striga asiatica HOM05D011878 ORTHO05D011270 5.4e-07 58.5 75 41.3
FvH4_4g15595 Fragaria vesca HOM05D000045 ORTHO05D011270 7.1e-07 58.2 68 45.6
Solyc11g020215.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 9.3e-07 57.8 208 27.4
Migut.O00582 Erythranthe guttata HOM05D000045 ORTHO05D000067 1.2e-06 57.4 209 23.4
Atru.chr3.19 Acer truncatum HOM05D000045 ORTHO05D000067 1.6e-06 57.0 191 24.1
Ciclev10023742m.g Citrus clementina HOM05D000045 ORTHO05D000611 1.6e-06 57.0 57 43.9
PSO339G0029 Papaver somniferum HOM05D000045 ORTHO05D000067 1.6e-06 57.0 108 33.3
PSO384G0901 Papaver somniferum HOM05D000045 ORTHO05D000067 1.6e-06 57.0 104 31.7
Rhsim10G0098100 Rhododendron simsii HOM05D000006 ORTHO05D010036 1.6e-06 57.0 166 28.3
Ciclev10018310m.g Citrus clementina HOM05D000045 ORTHO05D000067 2.1e-06 56.6 159 30.8
Hma1.2p1_0032F.1_g018650 Hydrangea macrophylla HOM05D000045 ORTHO05D000067 3.5e-06 55.8 211 22.7
Hund25812 Selenicereus undatus HOM05D000045 ORTHO05D010054 3.5e-06 55.8 203 25.1
Aqoxy4G01150 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 4.6e-06 55.5 144 27.1
Solyc03g082435.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 4.6e-06 55.5 208 27.9
Solyc03g150148.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 4.6e-06 55.5 208 26.9
Solyc04g070995.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 4.6e-06 55.5 208 26.9
Solyc04g071265.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 4.6e-06 55.5 208 26.9
Solyc10g044585.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 4.6e-06 55.5 208 26.9
MSTRG.18722 Avicennia marina HOM05D000045 ORTHO05D000067 6.0e-06 55.1 211 22.7
Migut.D02326 Erythranthe guttata HOM05D000045 ORTHO05D000067 6.0e-06 55.1 174 27.6
FvH4_4g15731 Fragaria vesca HOM05D009480 ORTHO05D010036 6.0e-06 55.1 59 44.1
RcHm_v2.0_Chr2g0096701 Rosa chinensis HOM05D000045 ORTHO05D000067 6.0e-06 55.1 212 23.6
Solyc02g150118.1 Solanum lycopersicum HOM05D000045 ORTHO05D000067 7.8e-06 54.7 210 27.6


User provided reference genes

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