Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G4644 Fragaria x ananassa HOM05D006824 ORTHO05D008779 7.2e-52 206.8 96 100.0
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 6.6e-45 183.7 88 96.6
FvH4_6g00710 Fragaria vesca HOM05D006824 ORTHO05D008779 3.4e-41 171.4 81 97.5
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 3.4e-41 171.4 81 97.5
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 2.8e-40 168.3 81 95.1
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 7.3e-36 153.7 81 84.0
MD04G1242100 Malus domestica HOM05D006824 ORTHO05D008779 1.2e-35 152.9 84 82.1
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 3.6e-35 151.4 81 88.9
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 1.0e-34 149.8 80 85.0
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 1.4e-34 149.4 81 79.0
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 2.3e-34 148.7 81 81.5
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 4.0e-34 147.9 81 82.7
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 5.2e-34 147.5 81 84.0
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 6.8e-34 147.1 81 81.5
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 1.2e-33 146.4 80 81.2
Hma1.2p1_0171F.1_g075760 Hydrangea macrophylla HOM05D006824 ORTHO05D008779 1.5e-33 146.0 81 81.5
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 2.0e-33 145.6 80 81.2
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 2.0e-33 145.6 80 83.8
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 5.8e-33 144.1 80 82.5
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 9.8e-33 143.3 80 80.0
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 1.3e-32 142.9 80 80.0
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 2.9e-32 141.7 80 78.8
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 2.9e-32 141.7 81 75.3
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 4.9e-32 141.0 81 79.0
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 4.9e-32 141.0 81 79.0
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 8.3e-32 140.2 81 80.2
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 1.1e-31 139.8 81 76.5
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 1.1e-31 139.8 80 77.5
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 1.1e-31 139.8 80 78.8
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 1.9e-31 139.0 81 76.5
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 1.9e-31 139.0 80 78.8
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 1.9e-31 139.0 80 78.8
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 2.4e-31 138.7 81 76.5
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 2.4e-31 138.7 81 76.5
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 2.4e-31 138.7 81 76.5
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 2.4e-31 138.7 80 78.8
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 2.4e-31 138.7 80 78.8
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 2.4e-31 138.7 80 78.8
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 2.4e-31 138.7 81 74.1
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 3.2e-31 138.3 80 77.5
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 3.2e-31 138.3 81 74.1
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 3.2e-31 138.3 80 78.8
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 3.2e-31 138.3 80 78.8
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 4.1e-31 137.9 80 77.5
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 5.4e-31 137.5 80 77.5
Nn1g09799 Nelumbo nucifera HOM05D006824 ORTHO05D008779 7.0e-31 137.1 80 77.5
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 7.0e-31 137.1 80 77.5
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 9.2e-31 136.7 81 75.3
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 1.2e-30 136.3 100 64.0
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 1.2e-30 136.3 80 76.2
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 1.6e-30 136.0 80 75.0
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 2.0e-30 135.6 80 76.2
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 2.0e-30 135.6 80 75.0
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 2.0e-30 135.6 80 75.0
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 2.7e-30 135.2 80 76.2
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 2.7e-30 135.2 81 76.5
Gohir.D03G049300 Gossypium hirsutum HOM05D006824 ORTHO05D008779 2.7e-30 135.2 80 77.5
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 2.7e-30 135.2 80 77.5
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 2.7e-30 135.2 79 75.9
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 3.5e-30 134.8 80 73.8
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 3.5e-30 134.8 80 73.8
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 3.5e-30 134.8 80 73.8
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 3.5e-30 134.8 81 74.1
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 3.5e-30 134.8 80 75.0
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 4.6e-30 134.4 81 74.1
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 6.0e-30 134.0 80 75.0
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 6.0e-30 134.0 80 75.0
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 7.8e-30 133.7 81 74.1
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 7.8e-30 133.7 80 76.2
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 1.0e-29 133.3 81 72.8
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 1.3e-29 132.9 80 73.8
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 1.3e-29 132.9 81 75.3
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 1.7e-29 132.5 81 69.1
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 2.3e-29 132.1 80 73.8
MELO3C008753.2 Cucumis melo HOM05D006824 ORTHO05D008779 3.0e-29 131.7 81 71.6
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 3.0e-29 131.7 80 70.0
MELO3C025302.2 Cucumis melo HOM05D006824 ORTHO05D008779 3.9e-29 131.3 81 70.4
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 3.9e-29 131.3 81 71.6
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 6.6e-29 130.6 80 72.5
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 1.1e-28 129.8 80 71.2
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 1.1e-28 129.8 81 72.8
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 1.9e-28 129.0 80 71.2
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 1.9e-28 129.0 80 72.5
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 1.9e-28 129.0 80 70.0
Zm00001eb169290 Zea mays HOM05D006824 ORTHO05D008779 1.9e-28 129.0 81 70.4
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 1.2e-27 126.3 80 71.2
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 1.2e-27 126.3 80 72.5
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 1.6e-27 125.9 80 68.8
SalBow3G1143 Salvia bowleyana HOM05D006824 ORTHO05D008779 3.6e-27 124.8 102 59.8
Nitab4.5_0008294g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 3.1e-26 121.7 76 73.7
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 8.9e-26 120.2 100 60.0
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 3.4e-25 118.2 86 64.0
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 7.5e-25 117.1 116 51.7
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 1.1e-23 113.2 79 63.3
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 5.4e-23 110.9 79 63.3
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 9.2e-23 110.2 79 67.1
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 9.2e-23 110.2 77 62.3
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 3.5e-22 108.2 79 58.2
Nitab4.5_0009285g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 2.8e-19 98.6 81 61.7
arahy.Tifrunner.gnm1.ann1.X7EDXL Arachis hypogaea HOM05D006824 ORTHO05D021501 2.0e-17 92.4 55 74.5
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 3.7e-16 88.2 79 51.9
arahy.Tifrunner.gnm1.ann1.EIZA4A Arachis hypogaea HOM05D006824 ORTHO05D008779 1.1e-15 86.7 50 76.0
arahy.Tifrunner.gnm1.ann1.2JVF5K Arachis hypogaea HOM05D001175 ORTHO05D021501 3.0e-13 78.6 102 42.2
arahy.Tifrunner.gnm1.ann1.96LZZJ Arachis hypogaea HOM05D006824 ORTHO05D021501 3.0e-13 78.6 102 42.2
arahy.Tifrunner.gnm1.ann1.DM3ST4 Arachis hypogaea HOM05D006824 ORTHO05D021501 3.0e-13 78.6 94 45.7
arahy.Tifrunner.gnm1.ann1.0X0W56 Arachis hypogaea HOM05D006824 ORTHO05D021501 3.9e-13 78.2 100 44.0
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea HOM05D006661 ORTHO05D021501 8.6e-13 77.0 101 42.6
arahy.Tifrunner.gnm1.ann1.JEI8NT Arachis hypogaea HOM05D006824 ORTHO05D008779 4.7e-11 71.2 92 43.5
Psat3g104160 Pisum sativum HOM05D006824 ORTHO05D008779 1.1e-10 70.1 42 76.2
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 1.5e-09 66.2 43 69.8
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 3.8e-08 61.6 86 34.9
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 4.2e-07 58.2 33 75.8
Cpa.g.sc32.161 Carica papaya HOM05D006824 ORTHO05D008779 7.8e-06 53.9 32 71.9


User provided reference genes

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