Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G4560 Fragaria x ananassa HOM05D003174 ORTHO05D003439 0.0e+00 1729.9 984 100.0
FAN02G1934 Fragaria x ananassa HOM05D003174 ORTHO05D003439 0.0e+00 1422.5 973 87.2
FAN05G2164 Fragaria x ananassa HOM05D003174 ORTHO05D003439 0.0e+00 1303.5 972 80.7
RcHm_v2.0_Chr3g0467041 Rosa chinensis HOM05D003174 ORTHO05D003439 0.0e+00 1075.1 1068 66.9
FvH4_6g14130 Fragaria vesca HOM05D003174 ORTHO05D003439 3.0e-294 1015.4 747 85.1
FvH4_6g25230 Fragaria vesca HOM05D003174 ORTHO05D003439 5.2e-222 775.4 638 69.4
FAN05G5174 Fragaria x ananassa HOM05D003174 ORTHO05D003439 2.1e-218 763.5 638 68.8
FAN14G5980 Fragaria x ananassa HOM05D003174 ORTHO05D003439 6.9e-206 721.8 969 55.5
FAN09G4813 Fragaria x ananassa HOM05D003174 ORTHO05D003439 6.7e-161 572.4 647 56.3
Prupe.6G252000 Prunus persica HOM05D003174 ORTHO05D003439 6.7e-44 183.7 455 34.5
MD04G1124900 Malus domestica HOM05D003174 ORTHO05D003439 1.6e-29 136.0 450 29.8
Haze_20757 Corylus avellana HOM05D003174 ORTHO05D003439 2.1e-21 109.0 307 32.6
Cfa017411 Carpinus fangiana HOM05D003174 ORTHO05D003439 5.7e-19 100.9 306 32.4
QL07p031124 Quercus lobata HOM05D003174 ORTHO05D003439 6.3e-18 97.4 239 34.3
QL07p047847 Quercus lobata HOM05D003174 ORTHO05D003439 6.3e-18 97.4 239 34.3
CsaV3_4G024810 Cucumis sativus L. HOM05D003174 ORTHO05D003439 3.0e-12 78.6 100 44.0
MELO3C003115.2 Cucumis melo HOM05D003174 ORTHO05D003439 2.6e-11 75.5 98 43.9
Sabra04G0051000 Salix brachista HOM05D003174 ORTHO05D003439 1.3e-10 73.2 89 43.8
Eucgr.A00550 Eucalyptus grandis HOM05D003174 ORTHO05D003439 1.7e-10 72.8 120 37.5
Potri.004G077400 Populus trichocarpa HOM05D003174 ORTHO05D003439 3.7e-10 71.6 89 41.6
Manes.08G078100 Manihot esculenta HOM05D003174 ORTHO05D003439 4.9e-10 71.2 112 40.2
Lj3A970G57 Lonicera japonica HOM05D003174 ORTHO05D003439 6.3e-10 70.9 149 34.2
COL.COLO4_14835 Corchorus olitorius HOM05D003174 ORTHO05D003439 1.4e-09 69.7 196 30.6
Migut.C00381 Erythranthe guttata HOM05D003174 ORTHO05D003439 1.4e-09 69.7 226 30.5
arahy.Tifrunner.gnm1.ann1.6UZP51 Arachis hypogaea HOM05D003174 ORTHO05D003439 1.8e-09 69.3 81 44.4
arahy.Tifrunner.gnm1.ann1.IJS1VI Arachis hypogaea HOM05D003174 ORTHO05D003439 2.4e-09 68.9 81 44.4
Cpa.g.sc260.5 Carica papaya HOM05D003174 ORTHO05D003439 3.1e-09 68.6 77 48.1
Sed0000072 Sechium edule HOM05D003174 ORTHO05D003439 3.1e-09 68.6 130 35.4
Solyc04g015710.3 Solanum lycopersicum HOM05D003174 ORTHO05D003439 3.1e-09 68.6 115 36.5
CSS0007124 Camellia sinensis var. sinensis HOM05D003174 ORTHO05D003439 4.1e-09 68.2 108 40.7
Gohir.A09G157600 Gossypium hirsutum HOM05D003174 ORTHO05D003439 4.1e-09 68.2 79 45.6
Gohir.D09G152900 Gossypium hirsutum HOM05D003174 ORTHO05D003439 4.1e-09 68.2 112 36.6
Sopen04g007790 Solanum pennellii HOM05D003174 ORTHO05D003439 4.1e-09 68.2 115 36.5
arahy.Tifrunner.gnm1.ann1.Y7W1NJ Arachis hypogaea HOM05D003174 ORTHO05D003439 7.0e-09 67.4 191 28.8
Dinv35623 Davidia involucrata HOM05D003174 ORTHO05D003439 7.0e-09 67.4 99 39.4
Gorai.006G174400 Gossypium raimondii HOM05D003174 ORTHO05D003439 9.2e-09 67.0 112 36.6
Actinidia11253 Actinidia chinensis HOM05D003174 ORTHO05D003439 1.2e-08 66.6 87 46.0
HanXRQChr08g0226171 Helianthus annuus HOM05D003174 ORTHO05D003439 1.6e-08 66.2 114 37.7
Peaxi162Scf00165g01840 Petunia axillaris HOM05D003174 ORTHO05D003439 1.6e-08 66.2 74 48.6
Thecc.05G042400 Theobroma cacao HOM05D003174 ORTHO05D003439 2.0e-08 65.9 182 30.8
GSVIVG01034205001 Vitis vinifera HOM05D003174 ORTHO05D003439 2.0e-08 65.9 384 25.8
Nn1g09826 Nelumbo nucifera HOM05D003174 ORTHO05D003439 2.7e-08 65.5 118 36.4
Phvul.007G157300 Phaseolus vulgaris HOM05D003174 ORTHO05D003439 2.7e-08 65.5 113 37.2
arahy.Tifrunner.gnm1.ann1.FD13B1 Arachis hypogaea HOM05D003174 ORTHO05D003439 3.5e-08 65.1 81 42.0
Duzib106G0893 Durio zibethinus HOM05D003174 ORTHO05D003439 3.5e-08 65.1 124 37.9
Rhsim02G0075700 Rhododendron simsii HOM05D003174 ORTHO05D003439 4.5e-08 64.7 218 26.1
CANSAT21G1894 Cannabis sativa HOM05D003174 ORTHO05D003439 5.9e-08 64.3 67 50.7
CAN.G74.6 Capsicum annuum HOM05D003174 ORTHO05D003439 5.9e-08 64.3 110 34.5
VMungo1127G0815 Vigna mungo HOM05D003174 ORTHO05D003439 5.9e-08 64.3 87 35.6
Ciclev10011079m.g Citrus clementina HOM05D003174 ORTHO05D003439 7.8e-08 63.9 140 33.6
PSO532G0060 Papaver somniferum HOM05D003174 ORTHO05D003439 7.8e-08 63.9 82 42.7
Lj1g0011268 Lotus japonicus HOM05D003174 ORTHO05D003439 2.3e-07 62.4 122 37.7
MBI17_g16533_MAGBIO Magnolia biondii HOM05D003174 ORTHO05D003439 2.3e-07 62.4 87 39.1
TAR623G0639 Trochodendron aralioides HOM05D003174 ORTHO05D003439 2.3e-07 62.4 105 37.1
CAN.G97.37 Capsicum annuum HOM05D003174 ORTHO05D003439 2.9e-07 62.0 74 44.6
Cc06_g02840 Coffea canephora HOM05D003174 ORTHO05D003439 2.9e-07 62.0 52 55.8
Glyma.10G043400 Glycine max HOM05D003174 ORTHO05D003439 2.9e-07 62.0 187 29.4
Lalb_Chr06g0170971 Lupinus albus HOM05D003174 ORTHO05D003439 2.9e-07 62.0 75 41.3
Nitab4.5_0004701g0030 Nicotiana tabacum HOM05D003174 ORTHO05D003439 2.9e-07 62.0 176 31.2
Peaxi162Scf00066g01134 Petunia axillaris HOM05D003174 ORTHO05D003439 2.9e-07 62.0 112 32.1
PGR004G2807 Punica granatum HOM05D003174 ORTHO05D003439 2.9e-07 62.0 96 40.6
Aa31LG1G22280 Aethionema arabicum HOM05D003174 ORTHO05D003439 3.9e-07 61.6 88 39.8
arahy.Tifrunner.gnm1.ann1.SHBY5H Arachis hypogaea HOM05D003174 ORTHO05D003439 3.9e-07 61.6 46 58.7
Nitab4.5_0000761g0050 Nicotiana tabacum HOM05D003174 ORTHO05D003439 3.9e-07 61.6 74 45.9
Nitab4.5_0004091g0070 Nicotiana tabacum HOM05D003174 ORTHO05D003439 5.0e-07 61.2 74 45.9
MSTRG.924 Avicennia marina HOM05D003174 ORTHO05D003439 6.6e-07 60.8 87 36.8
Thhalv10023956m.g Eutrema salsugineum HOM05D001877 ORTHO05D001886 6.6e-07 60.8 74 43.2
THA.LOC104816287 Tarenaya hassleriana HOM05D003174 ORTHO05D003439 6.6e-07 60.8 75 42.7
TWI53G0288 Tripterygium wilfordii HOM05D003174 ORTHO05D003439 6.6e-07 60.8 47 55.3
Psat0s2930g0040 Pisum sativum HOM05D003174 ORTHO05D003439 8.6e-07 60.5 188 25.0
PGSC0003DMG400027274 Solanum tuberosum HOM05D003174 ORTHO05D003439 8.6e-07 60.5 194 29.9
Cfa015779 Carpinus fangiana HOM05D003174 ORTHO05D003439 1.1e-06 60.1 117 34.2
Medtr1g069020 Medicago truncatula HOM05D003174 ORTHO05D003439 1.1e-06 60.1 118 33.9
TWI15G0304 Tripterygium wilfordii HOM05D003174 ORTHO05D003439 1.1e-06 60.1 75 44.0
TWI15G0472 Tripterygium wilfordii HOM05D003174 ORTHO05D003439 1.1e-06 60.1 75 44.0
arahy.Tifrunner.gnm1.ann1.4Q6X4E Arachis hypogaea HOM05D003174 ORTHO05D003439 1.5e-06 59.7 55 50.9
Medtr1g069015 Medicago truncatula HOM05D003174 ORTHO05D003439 1.5e-06 59.7 191 27.7
Nn2g10415 Nelumbo nucifera HOM05D003174 ORTHO05D003439 1.5e-06 59.7 278 26.6
Sopen09g005270 Solanum pennellii HOM05D003174 ORTHO05D003439 1.5e-06 59.7 84 40.5
BolC2t06049H Brassica oleracea HOM05D003174 ORTHO05D003439 1.9e-06 59.3 74 41.9
CARHR210840 Cardamine hirsuta HOM05D003174 ORTHO05D003439 1.9e-06 59.3 121 30.6
Duzib093G0200 Durio zibethinus HOM05D003174 ORTHO05D003439 1.9e-06 59.3 98 35.7
Nitab4.5_0000847g0080 Nicotiana tabacum HOM05D003174 ORTHO05D003439 1.9e-06 59.3 183 27.9
Sp6g39990 Schrenkiella parvula HOM05D003174 ORTHO05D003439 1.9e-06 59.3 75 40.0
AT5G02520 Arabidopsis thaliana HOM05D003174 ORTHO05D003439 2.5e-06 58.9 91 36.3
BcaC03g13058 Brassica carinata HOM05D003174 ORTHO05D003439 2.5e-06 58.9 74 41.9
CiPaw.10G144200 Carya illinoinensis HOM05D003174 ORTHO05D003439 2.5e-06 58.9 67 47.8
PSO541G3184 Papaver somniferum HOM05D003174 ORTHO05D003439 2.5e-06 58.9 91 38.5
SGA_v2.0_scaffold204G41637 Striga asiatica HOM05D003174 ORTHO05D003439 2.5e-06 58.9 117 34.2
TPR.G23103 Trifolium pratense HOM05D003174 ORTHO05D003439 2.5e-06 58.9 44 56.8
GSVIVG01013578001 Vitis vinifera HOM05D003174 ORTHO05D003439 2.5e-06 58.9 140 30.7
CiPaw.02G056500 Carya illinoinensis HOM05D003174 ORTHO05D003439 3.3e-06 58.5 97 36.1
Sp2g05410 Schrenkiella parvula HOM05D001877 ORTHO05D001886 3.3e-06 58.5 83 41.0
SGA_v2.0_scaffold6G03139 Striga asiatica HOM05D003174 ORTHO05D003439 3.3e-06 58.5 75 41.3
THA.LOC104802302 Tarenaya hassleriana HOM05D003174 ORTHO05D003439 3.3e-06 58.5 74 40.5
BcaB04g20191 Brassica carinata HOM05D003174 ORTHO05D003439 4.3e-06 58.2 78 41.0
C02p00500 Brassica napus HOM05D003174 ORTHO05D003439 4.3e-06 58.2 74 41.9
Haze_00715 Corylus avellana HOM05D003174 ORTHO05D003439 4.3e-06 58.2 118 33.1
SHI12657 Sapria himalayana HOM05D003174 ORTHO05D003439 4.3e-06 58.2 45 55.6
AL6G11780 Arabidopsis lyrata HOM05D003174 ORTHO05D003439 5.6e-06 57.8 90 35.6
BcaB05g21888 Brassica carinata HOM05D003174 ORTHO05D003439 5.6e-06 57.8 84 38.1
Carub.0006s0132 Capsella rubella HOM05D003174 ORTHO05D003439 5.6e-06 57.8 83 37.3
TPR.G29857 Trifolium pratense HOM05D003174 ORTHO05D003439 5.6e-06 57.8 45 53.3
vmacro08698 Vaccinium macrocarpon HOM05D003174 ORTHO05D003439 5.6e-06 57.8 115 34.8
Migut.H00512 Erythranthe guttata HOM05D003174 ORTHO05D003439 7.3e-06 57.4 45 55.6
Eucgr.I00627 Eucalyptus grandis HOM05D003174 ORTHO05D003439 7.3e-06 57.4 101 33.7
Manes.04G049000 Manihot esculenta HOM05D003174 ORTHO05D003439 7.3e-06 57.4 84 39.3
PSO675G7155 Papaver somniferum HOM05D003174 ORTHO05D003439 7.3e-06 57.4 75 36.0
CDE07G1712 Ceratophyllum demersum HOM05D003174 ORTHO05D003439 9.5e-06 57.0 95 32.6
Medtr5g040080 Medicago truncatula HOM05D003174 ORTHO05D003439 9.5e-06 57.0 142 31.0
PGR083G2046 Punica granatum HOM05D003174 ORTHO05D003439 9.5e-06 57.0 91 40.7
Rhsim05G0189700 Rhododendron simsii HOM05D003174 ORTHO05D003439 9.5e-06 57.0 114 31.6


User provided reference genes

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