Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 9.8e-203 709.9 359 100.0
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 1.5e-150 536.6 293 94.2
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 1.8e-148 529.6 294 92.9
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 4.4e-134 481.9 297 85.2
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 3.1e-108 396.0 309 68.9
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 3.3e-105 386.0 312 66.7
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 1.6e-99 367.1 336 61.9
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 1.6e-75 287.3 300 54.7
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 2.1e-72 276.9 315 52.7
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 4.7e-72 275.8 311 54.0
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 1.1e-71 274.6 303 50.2
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 8.9e-71 271.6 311 52.1
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 1.1e-68 264.6 303 52.1
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 2.4e-68 263.5 302 50.3
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 7.8e-67 258.5 301 50.5
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 3.3e-65 253.1 305 50.5
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 2.8e-64 250.0 315 47.6
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 2.6e-62 243.4 300 49.0
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 9.9e-62 241.5 325 48.3
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 2.2e-61 240.4 316 46.5
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 2.4e-60 236.9 407 40.3
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 3.2e-60 236.5 301 47.8
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 7.1e-60 235.3 303 48.5
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 7.1e-60 235.3 352 42.3
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 2.7e-59 233.4 313 46.3
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 1.0e-58 231.5 302 46.7
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 1.5e-57 227.6 305 46.9
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 5.6e-57 225.7 302 48.0
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 2.1e-56 223.8 293 45.7
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 2.8e-56 223.4 327 43.7
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 4.8e-56 222.6 293 47.1
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 6.2e-56 222.2 320 45.3
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 1.4e-55 221.1 298 46.0
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 4.0e-55 219.5 329 42.6
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 1.5e-54 217.6 305 45.2
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 2.6e-54 216.9 296 43.9
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 2.2e-53 213.8 318 43.1
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 2.9e-53 213.4 302 44.4
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 1.4e-52 211.1 317 43.8
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 3.2e-52 209.9 304 42.4
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 9.3e-52 208.4 304 42.4
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 2.1e-51 207.2 312 44.2
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 2.1e-51 207.2 308 43.2
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 8.7e-50 201.8 309 41.7
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 1.1e-49 201.4 314 41.4
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 4.3e-49 199.5 312 40.7
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 5.6e-49 199.1 313 42.2
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 1.3e-48 198.0 320 39.4
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 1.6e-48 197.6 307 43.3
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 2.8e-48 196.8 303 43.6
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 2.8e-48 196.8 331 40.5
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 4.8e-48 196.1 309 41.1
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 8.1e-48 195.3 298 43.6
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 1.1e-47 194.9 337 39.8
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 3.1e-47 193.4 325 41.8
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 4.0e-47 193.0 313 39.9
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 9.0e-47 191.8 328 38.4
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 2.2e-45 187.2 314 41.1
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 4.9e-45 186.0 303 42.9
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 7.1e-44 182.2 265 43.8
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 2.7e-43 180.3 237 47.7
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 3.5e-43 179.9 284 40.5
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 1.3e-42 177.9 228 46.9
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 2.3e-42 177.2 275 41.5
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 5.1e-42 176.0 301 38.2
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 7.4e-41 172.2 305 36.7
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 1.3e-40 171.4 188 50.5
Lj2A447T55 Lonicera japonica HOM05D007356 ORTHO05D009247 1.1e-39 168.3 170 54.1
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 1.4e-39 167.9 248 47.6
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 2.0e-38 164.1 330 36.7
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 3.2e-36 156.8 323 36.5
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 4.6e-35 152.9 322 36.0
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 1.0e-34 151.8 327 37.9
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 1.3e-34 151.4 317 37.2
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 2.3e-34 150.6 305 34.8
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 6.7e-34 149.1 191 47.1
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 8.2e-32 142.1 276 37.0
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 5.9e-30 136.0 319 34.5
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 7.7e-30 135.6 261 36.8
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 1.1e-28 131.7 293 35.2
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 3.2e-28 130.2 423 31.0
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 1.1e-25 121.7 194 44.3
Aqoxy3G02147 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 6.3e-24 115.9 133 45.9
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 8.2e-24 115.5 312 32.1
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 1.4e-23 114.8 268 35.1
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 2.0e-22 110.9 310 32.3
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 5.0e-21 106.3 153 47.1
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 1.4e-20 104.8 307 28.3
Sc11g0008210 Simmondsia chinensis HOM05D007356 ORTHO05D009247 3.2e-20 103.6 135 45.9
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 4.2e-20 103.2 381 27.3
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 5.7e-17 92.8 153 40.5
Lsat_1_v5_gn_3_87441 Lactuca sativa HOM05D007356 ORTHO05D009247 3.5e-14 83.6 121 41.3
Sc11g0008200 Simmondsia chinensis HOM05D007356 ORTHO05D009247 4.2e-12 76.6 76 52.6
Lj2C447T11 Lonicera japonica HOM05D007356 ORTHO05D009247 1.3e-08 65.1 101 39.6
Actinidia15867 Actinidia chinensis HOM05D007356 ORTHO05D009247 3.7e-08 63.5 246 28.0
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 5.3e-07 59.7 127 29.9
SMO145G0090 Selaginella moellendorffii HOM05D007356 ORTHO05D009247 3.5e-06 57.0 352 25.9


User provided reference genes

Program Settings