Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G4364 Fragaria x ananassa HOM05D000107 ORTHO05D002484 9.9e-64 246.5 116 100.0
FvH4_6g30093 Fragaria vesca HOM05D000107 ORTHO05D000062 3.1e-41 171.8 93 83.9
FvH4_6g34821 Fragaria vesca HOM05D000107 ORTHO05D000062 9.4e-22 107.1 92 54.3
FvH4_3g21361 Fragaria vesca HOM05D000107 ORTHO05D000062 3.0e-20 102.1 90 54.4
FvH4_4g14443 Fragaria vesca HOM05D000107 ORTHO05D002484 8.8e-20 100.5 90 54.4
FAN05G1027 Fragaria x ananassa HOM05D008794 ORTHO05D002484 1.2e-19 100.1 48 91.7
FvH4_7g06092 Fragaria vesca HOM05D000107 ORTHO05D000062 2.6e-19 99.0 88 53.4
FAN18G0296 Fragaria x ananassa HOM05D000107 ORTHO05D002484 2.6e-19 99.0 89 53.9
FvH4_7g13281 Fragaria vesca HOM05D000107 ORTHO05D002484 3.4e-19 98.6 90 53.3
FAN09G0513 Fragaria x ananassa HOM05D000107 ORTHO05D002484 3.4e-19 98.6 88 54.5
FvH4_6g31483 Fragaria vesca HOM05D000107 ORTHO05D002484 4.4e-19 98.2 91 53.8
FvH4_1g22121 Fragaria vesca HOM05D000107 ORTHO05D002484 5.7e-19 97.8 90 52.2
FvH4_3g22111 Fragaria vesca HOM05D000107 ORTHO05D002484 5.7e-19 97.8 91 53.8
FvH4_4g10471 Fragaria vesca HOM05D000107 ORTHO05D000062 5.7e-19 97.8 88 54.5
FvH4_4g12773 Fragaria vesca HOM05D000107 ORTHO05D002484 5.7e-19 97.8 90 53.3
FvH4_5g30952 Fragaria vesca HOM05D000107 ORTHO05D000062 5.7e-19 97.8 88 54.5
FvH4_6g21813 Fragaria vesca HOM05D000107 ORTHO05D000062 5.7e-19 97.8 88 53.4
FvH4_6g43082 Fragaria vesca HOM05D000107 ORTHO05D000062 5.7e-19 97.8 88 54.5
FvH4_2g02785 Fragaria vesca HOM05D000107 ORTHO05D000062 9.7e-19 97.1 88 54.5
FAN04G1338 Fragaria x ananassa HOM05D000107 ORTHO05D002484 1.3e-18 96.7 87 54.0
FAN11G0428 Fragaria x ananassa HOM05D004559 ORTHO05D005283 1.3e-18 96.7 87 54.0
FvH4_2g14771 Fragaria vesca HOM05D000107 ORTHO05D002484 1.7e-18 96.3 88 53.4
FAN22G1729 Fragaria x ananassa HOM05D000107 ORTHO05D002484 1.7e-18 96.3 88 53.4
FvH4_c18g00010 Fragaria vesca HOM05D000107 ORTHO05D002484 2.2e-18 95.9 87 54.0
FAN02G0616 Fragaria x ananassa HOM05D000107 ORTHO05D002484 2.2e-18 95.9 87 54.0
FvH4_3g25312 Fragaria vesca HOM05D000107 ORTHO05D000062 2.8e-18 95.5 90 52.2
FvH4_5g19471 Fragaria vesca HOM05D000107 ORTHO05D000062 2.8e-18 95.5 91 52.7
FvH4_4g19121 Fragaria vesca HOM05D000107 ORTHO05D000062 3.7e-18 95.1 88 52.3
FAN01G1987 Fragaria x ananassa HOM05D000107 ORTHO05D002484 3.7e-18 95.1 88 52.3
FAN09G1655 Fragaria x ananassa HOM05D000107 ORTHO05D002484 4.8e-18 94.7 88 53.4
FAN03G3271 Fragaria x ananassa HOM05D000107 ORTHO05D002484 6.3e-18 94.4 87 52.9
FvH4_7g17991 Fragaria vesca HOM05D000107 ORTHO05D000062 1.1e-17 93.6 87 51.7
FvH4_4g13891 Fragaria vesca HOM05D000107 ORTHO05D000062 1.8e-17 92.8 88 51.1
FAN24G0110 Fragaria x ananassa HOM05D000107 ORTHO05D002484 5.3e-17 91.3 85 51.8
FvH4_4g03322 Fragaria vesca HOM05D000107 ORTHO05D000062 3.5e-16 88.6 87 50.6
FvH4_4g14563 Fragaria vesca HOM05D000107 ORTHO05D000062 5.9e-16 87.8 86 51.2
FvH4_3g36582 Fragaria vesca HOM05D000107 ORTHO05D002484 7.7e-16 87.4 88 51.1
FAN15G2984 Fragaria x ananassa HOM05D000107 ORTHO05D002484 7.7e-16 87.4 82 51.2
FAN27G1177 Fragaria x ananassa HOM05D000107 ORTHO05D002484 1.0e-15 87.0 80 52.5
FAN28G0038 Fragaria x ananassa HOM05D000107 ORTHO05D002484 5.0e-15 84.7 81 49.4
FAN02G3741 Fragaria x ananassa HOM05D000107 ORTHO05D002484 2.5e-14 82.4 88 48.9
FAN21G2871 Fragaria x ananassa HOM05D000107 ORTHO05D002484 4.2e-14 81.6 89 47.2
FAN04G3147 Fragaria x ananassa HOM05D000107 ORTHO05D002484 5.5e-14 81.3 77 51.9
FAN06G4362 Fragaria x ananassa HOM05D000107 ORTHO05D002484 5.5e-14 81.3 89 47.2
FAN16G1091 Fragaria x ananassa HOM05D000107 ORTHO05D002484 5.5e-14 81.3 89 47.2
FAN06G4306 Fragaria x ananassa HOM05D000107 ORTHO05D002484 7.2e-14 80.9 89 46.1
FAN07G2771 Fragaria x ananassa HOM05D000107 ORTHO05D002484 9.4e-14 80.5 88 47.7
FAN16G1337 Fragaria x ananassa HOM05D000107 ORTHO05D002484 9.4e-14 80.5 88 47.7
FvH4_1g28484 Fragaria vesca HOM05D007789 ORTHO05D008963 2.1e-13 79.3 89 47.2
FvH4_3g30391 Fragaria vesca HOM05D008640 ORTHO05D000062 2.7e-13 79.0 80 48.8
FAN04G0537 Fragaria x ananassa HOM05D000107 ORTHO05D002484 4.7e-13 78.2 83 49.4
FvH4_1g20523 Fragaria vesca HOM05D007789 ORTHO05D008963 6.1e-13 77.8 88 44.3
FvH4_6g16751 Fragaria vesca HOM05D007789 ORTHO05D008963 8.0e-13 77.4 94 42.6
FvH4_2g02271 Fragaria vesca HOM05D000107 ORTHO05D000062 1.0e-12 77.0 73 52.1
FvH4_4g16171 Fragaria vesca HOM05D007789 ORTHO05D008963 1.4e-12 76.6 88 45.5
FvH4_7g15281 Fragaria vesca HOM05D007789 ORTHO05D008963 1.8e-12 76.3 88 44.3
FvH4_3g31114 Fragaria vesca HOM05D007789 ORTHO05D008963 3.0e-12 75.5 88 45.5
FvH4_3g14831 Fragaria vesca HOM05D000514 ORTHO05D000222 3.4e-11 72.0 79 44.3
FAN11G2948 Fragaria x ananassa HOM05D007789 ORTHO05D002484 2.2e-10 69.3 85 42.4
CSS0022362 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 8.3e-10 67.4 93 37.6
FAN26G0735 Fragaria x ananassa HOM05D007789 ORTHO05D002484 8.3e-10 67.4 99 38.4
FAN27G0625 Fragaria x ananassa HOM05D009580 ORTHO05D002484 1.1e-09 67.0 94 38.3
FAN01G1927 Fragaria x ananassa HOM05D007789 ORTHO05D008963 3.1e-09 65.5 89 41.6
FAN20G3144 Fragaria x ananassa HOM05D007789 ORTHO05D008963 3.1e-09 65.5 101 36.6
FAN24G3358 Fragaria x ananassa HOM05D000107 ORTHO05D002484 3.1e-09 65.5 66 50.0
Rhsim10G0213900 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.1e-09 65.5 97 34.0
Rhsim04G0237300 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.1e-09 65.1 97 34.0
Rhsim01G0162400 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.0e-09 64.3 94 35.1
Rhsim01G0162500 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.0e-09 64.3 94 35.1
FAN02G1895 Fragaria x ananassa HOM05D007789 ORTHO05D002484 9.1e-09 63.9 87 39.1
FAN20G2494 Fragaria x ananassa HOM05D007789 ORTHO05D008963 9.1e-09 63.9 88 38.6
FvH4_5g36051 Fragaria vesca HOM05D007789 ORTHO05D008963 1.6e-08 63.2 78 38.5
CSS0020545 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.0e-08 62.8 93 35.5
FAN09G2667 Fragaria x ananassa HOM05D007789 ORTHO05D008963 2.0e-08 62.8 93 39.8
FAN23G0950 Fragaria x ananassa HOM05D007789 ORTHO05D008963 2.0e-08 62.8 74 43.2
FAN03G1415 Fragaria x ananassa HOM05D007789 ORTHO05D008963 3.5e-08 62.0 88 37.5
FvH4_6g17652 Fragaria vesca HOM05D000107 ORTHO05D008963 4.5e-08 61.6 92 42.4
FAN25G2985 Fragaria x ananassa HOM05D007789 ORTHO05D002484 4.5e-08 61.6 73 42.5
FAN02G3366 Fragaria x ananassa HOM05D000514 ORTHO05D000222 5.9e-08 61.2 80 38.8
Rhsim06G0126900 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.9e-08 61.2 89 34.8
Rhsim10G0126500 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-07 60.1 89 34.8
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.7e-07 59.7 92 34.8
Rhsim08G0059000 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.7e-07 59.7 92 34.8
Rhsim11G0005900 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.3e-07 59.3 89 33.7
Rhsim01G0128800 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.9e-07 58.9 93 34.4
Atru.chr6.2082 Acer truncatum HOM05D000107 ORTHO05D000062 3.8e-07 58.5 96 37.5
FvH4_4g08593 Fragaria vesca HOM05D007789 ORTHO05D002484 3.8e-07 58.5 66 43.9
Rhsim01G0051300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.8e-07 58.5 93 33.3
Rhsim04G0140300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.8e-07 58.5 92 34.8
AUR62015626 Chenopodium quinoa HOM05D000107 ORTHO05D000062 8.6e-07 57.4 112 33.9
SHI37975 Sapria himalayana HOM05D000107 ORTHO05D000062 8.6e-07 57.4 96 31.2
CSS0012968 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-06 57.0 93 33.3
CSS0015331 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-06 57.0 93 33.3
CSS0023882 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-06 57.0 93 33.3
CSS0024232 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-06 57.0 93 33.3
CSS0024895 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-06 57.0 93 33.3
CSS0028200 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-06 57.0 93 33.3
CSS0034304 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-06 57.0 93 33.3
CSS0038868 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-06 57.0 93 33.3
CSS0042079 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.1e-06 57.0 93 33.3
QL12p013571 Quercus lobata HOM05D000107 ORTHO05D000062 1.5e-06 56.6 99 30.3
Rhsim05G0124400 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.9e-06 56.2 93 35.5
Rhsim11G0023200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.9e-06 56.2 93 35.5
RhsimUnG0071900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.9e-06 56.2 92 33.7
CSS0048865 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.5e-06 55.8 96 35.4
AUR62018146 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.5e-06 55.8 43 53.5
FvH4_2g23873 Fragaria vesca HOM05D008794 ORTHO05D014224 2.5e-06 55.8 24 91.7
FAN28G0138 Fragaria x ananassa HOM05D007789 ORTHO05D008963 2.5e-06 55.8 65 43.1
CSS0009121 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.3e-06 55.5 94 33.0
CSS0013519 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.3e-06 55.5 94 33.0
CSS0050072 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.3e-06 55.5 94 33.0
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.3e-06 55.5 89 32.6
CSS0007220 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.2e-06 55.1 94 33.0
SHI45316 Sapria himalayana HOM05D000107 ORTHO05D000062 4.2e-06 55.1 101 29.7
Rhsim11G0024300 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.2e-06 54.3 93 35.5
AUR62043135 Chenopodium quinoa HOM05D000107 ORTHO05D000062 9.5e-06 53.9 106 32.1
Rhsim09G0073600 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.5e-06 53.9 95 34.7


User provided reference genes

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