Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G4302 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.1e-67 259.2 161 100.0
FAN05G4830 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-66 256.9 161 99.4
FAN14G2467 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.1e-64 249.2 161 96.9
FAN02G4625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.8e-61 238.4 158 96.8
FvH4_6g11570 Fragaria vesca HOM05D002813 ORTHO05D003203 5.1e-58 228.0 161 91.3
FAN20G2843 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.2e-44 182.2 156 79.5
FAN27G3388 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-34 150.6 157 54.1
FvH4_6g07350 Fragaria vesca HOM05D002813 ORTHO05D003203 5.1e-34 148.3 158 57.0
RcHm_v2.0_Chr6g0306251 Rosa chinensis HOM05D002813 ORTHO05D003203 3.3e-33 145.6 158 69.0
FAN02G0224 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.1e-31 139.0 158 65.8
FAN04G1304 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.1e-31 138.7 157 69.4
FvH4_5g19260 Fragaria vesca HOM05D002813 ORTHO05D003203 5.9e-30 134.8 153 69.9
FAN18G2037 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.0e-29 131.7 147 71.4
FAN18G2831 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.0e-29 131.7 147 71.4
FvH4_6g10180 Fragaria vesca HOM05D004619 ORTHO05D003203 1.0e-26 124.0 151 47.0
FAN14G2999 Fragaria x ananassa HOM05D004619 ORTHO05D003203 1.0e-26 124.0 151 47.0
FAN11G3977 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.1e-26 121.7 164 62.8
FAN21G3097 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.1e-26 121.7 164 45.7
FvH4_3g21760 Fragaria vesca HOM05D002813 ORTHO05D003203 1.1e-25 120.6 164 62.2
FAN14G4978 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.7e-25 118.2 138 49.3
FAN09G3756 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.1e-23 112.5 91 98.9
FvH4_6g06400 Fragaria vesca HOM05D002813 ORTHO05D003203 6.9e-23 111.3 91 62.6
FAN25G3517 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.5e-22 108.6 164 51.8
FAN21G2418 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-21 107.1 97 57.7
RcHm_v2.0_Chr3g0468781 Rosa chinensis HOM05D002813 ORTHO05D003203 2.1e-19 99.8 97 55.7
FAN02G3770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-18 97.1 158 59.5
FAN16G2005 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-18 97.1 142 64.8
FAN05G0887 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-18 96.7 158 58.9
FAN14G4635 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.0e-18 95.9 135 43.0
FAN13G3008 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.4e-17 92.0 158 36.1
FvH4_6g15310 Fragaria vesca HOM05D002813 ORTHO05D003203 5.7e-17 91.7 158 57.6
FAN05G2846 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.7e-17 90.9 84 57.1
FAN09G1014 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.8e-16 88.6 158 57.0
FAN05G3268 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-15 87.4 68 66.2
FAN04G3253 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.3e-15 85.1 99 45.5
FAN08G0212 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-14 83.6 99 45.5
FAN18G4233 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.0e-14 83.2 100 44.0
RcHm_v2.0_Chr2g0157391 Rosa chinensis HOM05D002813 ORTHO05D003203 2.0e-14 83.2 152 38.2
FvH4_5g12240 Fragaria vesca HOM05D002813 ORTHO05D003203 4.5e-14 82.0 99 44.4
FAN18G3569 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.5e-14 82.0 99 44.4
FvH4_6g41671 Fragaria vesca HOM05D002813 ORTHO05D003203 1.0e-13 80.9 93 49.5
FAN02G4465 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-13 80.9 93 49.5
FAN05G5767 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.0e-13 78.6 93 48.4
FvH4_2g37241 Fragaria vesca HOM05D002813 ORTHO05D003203 1.1e-12 77.4 141 39.0
Prupe.1G448200 Prunus persica HOM05D002813 ORTHO05D003203 1.4e-12 77.0 156 35.9
FAN20G2873 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.9e-12 76.6 159 34.0
FvH4_2g34980 Fragaria vesca HOM05D002813 ORTHO05D003203 4.2e-12 75.5 159 34.0
RcHm_v2.0_Chr5g0073471 Rosa chinensis HOM05D002813 ORTHO05D003203 4.2e-12 75.5 135 40.7
RcHm_v2.0_Chr6g0307031 Rosa chinensis HOM05D002813 ORTHO05D003203 4.2e-12 75.5 154 35.7
FvH4_7g07300 Fragaria vesca HOM05D002813 ORTHO05D003203 5.5e-12 75.1 158 34.2
FAN25G1955 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.5e-12 75.1 168 35.1
QL12p041353 Quercus lobata HOM05D002813 ORTHO05D003203 5.5e-12 75.1 156 36.5
FAN04G1781 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.2e-12 74.7 165 35.2
QL12p041358 Quercus lobata HOM05D002813 ORTHO05D003203 7.2e-12 74.7 156 34.0
FvH4_5g12200 Fragaria vesca HOM05D002813 ORTHO05D003203 1.2e-11 73.9 161 34.8
FAN01G2630 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-11 73.9 77 46.8
FAN27G1770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.2e-11 73.9 164 30.5
FvH4_5g33281 Fragaria vesca HOM05D002813 ORTHO05D003203 2.7e-11 72.8 75 50.7
FAN27G2509 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.7e-11 72.8 159 33.3
FAN21G1994 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.6e-11 72.4 168 34.5
FAN25G0311 Fragaria x ananassa HOM05D000808 ORTHO05D000863 3.6e-11 72.4 133 39.1
FAN18G2017 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.7e-11 72.0 75 50.7
RcHm_v2.0_Chr6g0307021 Rosa chinensis HOM05D002813 ORTHO05D003203 4.7e-11 72.0 135 34.1
FvH4_3g40700 Fragaria vesca HOM05D002813 ORTHO05D003203 6.1e-11 71.6 168 34.5
FAN11G0908 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.1e-11 71.6 168 34.5
FAN16G0815 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.1e-11 71.6 168 34.5
FAN04G3192 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.0e-11 71.2 161 35.4
FvH4_2g32511 Fragaria vesca HOM05D002813 ORTHO05D003203 1.4e-10 70.5 161 29.8
FvH4_3g11280 Fragaria vesca HOM05D002813 ORTHO05D003203 1.4e-10 70.5 145 36.6
FAN18G2715 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-10 70.5 105 39.0
FAN24G2117 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-10 70.5 161 29.8
MSTRG.9106 Avicennia marina HOM05D002813 ORTHO05D003203 1.8e-10 70.1 95 46.3
QL12p041348 Quercus lobata HOM05D002813 ORTHO05D003203 1.8e-10 70.1 156 34.0
RcHm_v2.0_Chr7g0185371 Rosa chinensis HOM05D002813 ORTHO05D003203 1.8e-10 70.1 98 44.9
RcHm_v2.0_Chr5g0073461 Rosa chinensis HOM05D002813 ORTHO05D003203 3.0e-10 69.3 71 52.1
FvH4_5g12190 Fragaria vesca HOM05D002813 ORTHO05D003203 3.9e-10 68.9 150 32.7
FvH4_3g11250 Fragaria vesca HOM05D002813 ORTHO05D003203 5.2e-10 68.6 105 45.7
FAN21G0510 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.8e-10 67.8 83 50.6
FvH4_2g32520 Fragaria vesca HOM05D002813 ORTHO05D003203 1.1e-09 67.4 134 33.6
FAN27G2003 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.6e-09 66.2 100 44.0
FvH4_5g12211 Fragaria vesca HOM05D002813 ORTHO05D003203 3.3e-09 65.9 91 44.0
FAN14G1246 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.3e-09 65.9 78 87.2
Nitab4.5_0003794g0040 Nicotiana tabacum HOM05D002813 ORTHO05D003203 4.4e-09 65.5 151 32.5
FvH4_2g32610 Fragaria vesca HOM05D002813 ORTHO05D003203 5.7e-09 65.1 134 32.8
FvH4_3g00150 Fragaria vesca HOM05D002813 ORTHO05D003203 5.7e-09 65.1 144 34.0
FAN02G4209 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.7e-09 65.1 151 34.4
FAN06G0128 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.7e-09 65.1 151 34.4
FvH4_7g29850 Fragaria vesca HOM05D002813 ORTHO05D003203 7.4e-09 64.7 151 34.4
FAN02G0699 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.7e-09 64.3 151 33.8
FAN06G0370 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.7e-09 64.3 151 33.8
FAN14G5169 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.7e-09 64.3 138 35.5
FAN18G2625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.7e-09 64.3 98 38.8
FAN25G2464 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.7e-09 64.3 151 33.8
FvH4_1g05120 Fragaria vesca HOM05D002813 ORTHO05D003203 1.3e-08 63.9 138 33.3
FAN18G0728 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-08 63.9 83 45.8
FAN18G3306 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-08 63.9 82 45.1
FAN27G1742 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-08 63.9 83 49.4
PGSC0003DMG400002228 Solanum tuberosum HOM05D002813 ORTHO05D003203 1.3e-08 63.9 151 32.5
Ciclev10010367m.g Citrus clementina HOM05D002813 ORTHO05D003203 1.7e-08 63.5 156 32.1
FAN15G1401 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-08 63.5 135 31.9
Sopen08g020490 Solanum pennellii HOM05D002813 ORTHO05D003203 1.7e-08 63.5 151 31.8
FAN15G2356 Fragaria x ananassa HOM05D002813 ORTHO05D000003 2.2e-08 63.2 83 49.4
FAN20G1057 Fragaria x ananassa HOM05D002813 ORTHO05D000003 2.8e-08 62.8 83 49.4
Nitab4.5_0028416g0010 Nicotiana tabacum HOM05D002813 ORTHO05D003203 2.8e-08 62.8 151 33.1
TWI63G1080 Tripterygium wilfordii HOM05D002813 ORTHO05D003203 2.8e-08 62.8 150 43.3
FvH4_2g32630 Fragaria vesca HOM05D002813 ORTHO05D003203 4.8e-08 62.0 137 31.4
FAN18G2398 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.8e-08 62.0 63 54.0
FAN24G2983 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.8e-08 62.0 137 31.4
FvH4_2g35530 Fragaria vesca HOM05D002813 ORTHO05D003203 6.3e-08 61.6 84 79.8
FvH4_5g12191 Fragaria vesca HOM05D002813 ORTHO05D003203 6.3e-08 61.6 106 35.8
FvH4_2g32530 Fragaria vesca HOM05D002813 ORTHO05D003203 1.1e-07 60.8 140 31.4
FAN13G0724 Fragaria x ananassa HOM05D001362 ORTHO05D001310 1.1e-07 60.8 164 28.7
FAN20G0435 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.1e-07 60.8 135 32.6
FvH4_2g35000 Fragaria vesca HOM05D002813 ORTHO05D003203 1.4e-07 60.5 76 43.4
FvH4_2g34990 Fragaria vesca HOM05D002813 ORTHO05D003203 1.8e-07 60.1 76 43.4
FAN27G0414 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-07 60.1 135 32.6
FAN28G0547 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.4e-07 59.7 88 39.8
FAN02G3428 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.1e-07 59.3 76 47.4
FAN27G1144 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.1e-07 59.3 76 42.1
FAN15G0916 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.1e-07 58.9 76 42.1
FAN15G1989 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.3e-07 58.5 78 38.5
FAN27G2375 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.3e-07 58.5 77 41.6
MD15G1093400 Malus domestica HOM05D002813 ORTHO05D003203 5.3e-07 58.5 146 32.2
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.0e-07 58.2 140 31.4
Dinv27902 Davidia involucrata HOM05D002813 ORTHO05D003203 9.1e-07 57.8 154 29.2
FvH4_7g18342 Fragaria vesca HOM05D002813 ORTHO05D003203 9.1e-07 57.8 76 47.4
FAN06G4693 Fragaria x ananassa HOM05D000201 ORTHO05D007118 9.1e-07 57.8 76 47.4
Nn2g11622 Nelumbo nucifera HOM05D002813 ORTHO05D003203 9.1e-07 57.8 150 29.3
FAN06G2895 Fragaria x ananassa HOM05D000201 ORTHO05D007118 1.2e-06 57.4 76 46.1
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 1.6e-06 57.0 97 39.2
FAN18G4406 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-06 57.0 76 44.7
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 2.0e-06 56.6 140 30.7
FAN15G3400 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.0e-06 56.6 135 30.4
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.0e-06 56.6 140 30.7
PGSC0003DMG400010583 Solanum tuberosum HOM05D002813 ORTHO05D003203 2.0e-06 56.6 92 39.1
FAN18G4231 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.6e-06 56.2 43 58.1
FAN19G0454 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.6e-06 56.2 132 31.8
Potri.006G238300 Populus trichocarpa HOM05D002813 ORTHO05D003203 2.6e-06 56.2 156 31.4
Duzib168G2404 Durio zibethinus HOM05D002813 ORTHO05D003203 3.5e-06 55.8 156 30.8
FAN13G0265 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.5e-06 55.5 138 33.3
FAN14G0433 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.5e-06 55.5 107 63.6
SGA_v2.0_scaffold103G30003 Striga asiatica HOM05D002813 ORTHO05D003203 4.5e-06 55.5 161 29.2
CiPaw.07G204200 Carya illinoinensis HOM05D002813 ORTHO05D003203 5.9e-06 55.1 150 29.3


User provided reference genes

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