Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G4276 Fragaria x ananassa HOM05D002873 ORTHO05D002978 3.2e-19 98.6 111 100.0
FAN14G0065 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.2e-19 98.2 110 100.0
FvH4_6g45800 Fragaria vesca HOM05D002873 ORTHO05D002978 9.3e-19 97.1 111 94.6
RcHm_v2.0_Chr2g0163991 Rosa chinensis HOM05D002873 ORTHO05D002978 2.2e-12 75.9 111 46.8
FAN02G0494 Fragaria x ananassa HOM05D002873 ORTHO05D002978 1.1e-11 73.6 110 46.4
RcHm_v2.0_Chr2g0163981 Rosa chinensis HOM05D002873 ORTHO05D002978 7.9e-10 67.4 106 67.0
TWI34G1371 Tripterygium wilfordii HOM05D002873 ORTHO05D002978 2.3e-09 65.9 110 41.8
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 8.8e-09 63.9 110 41.8
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 8.8e-09 63.9 110 41.8
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 8.8e-09 63.9 110 41.8
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 1.5e-08 63.2 110 41.8
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 2.5e-08 62.4 110 40.9
Haze_14075 Corylus avellana HOM05D002873 ORTHO05D002978 3.3e-08 62.0 43 76.7
THA.LOC109117084 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 4.3e-08 61.6 43 72.1
Prupe.3G244400 Prunus persica HOM05D002873 ORTHO05D002978 7.4e-08 60.8 110 40.0
FAN05G4367 Fragaria x ananassa HOM05D002873 ORTHO05D002978 9.7e-08 60.5 111 51.4
Lalb_Chr04g0258251 Lupinus albus HOM05D002873 ORTHO05D002978 9.7e-08 60.5 108 39.8
Sed0008680 Sechium edule HOM05D002873 ORTHO05D002978 9.7e-08 60.5 43 74.4
THA.LOC109116670 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 1.3e-07 60.1 42 73.8
Prupe.3G244700 Prunus persica HOM05D002873 ORTHO05D002978 2.2e-07 59.3 108 40.7
Peaxi162Scf01056g00020 Petunia axillaris HOM05D002873 ORTHO05D002978 2.8e-07 58.9 39 76.9
FAN09G3043 Fragaria x ananassa HOM05D002873 ORTHO05D002978 3.7e-07 58.5 111 41.4
Potri.017G108400 Populus trichocarpa HOM05D002873 ORTHO05D002978 3.7e-07 58.5 36 80.6
Rhsim10G0062500 Rhododendron simsii HOM05D007347 ORTHO05D009296 3.7e-07 58.5 40 72.5
A02p10830 Brassica napus HOM05D002873 ORTHO05D002978 4.8e-07 58.2 43 69.8
BraA02t06145Z Brassica rapa HOM05D002873 ORTHO05D002978 4.8e-07 58.2 43 69.8
MD09G1079600 Malus domestica HOM05D002873 ORTHO05D002978 6.3e-07 57.8 110 39.1
Potri.017G108500 Populus trichocarpa HOM05D002873 ORTHO05D002978 8.2e-07 57.4 39 71.8
Sabra17G0091100 Salix brachista HOM05D002873 ORTHO05D002978 8.2e-07 57.4 37 78.4
BcaC03g14385 Brassica carinata HOM05D002873 ORTHO05D002978 1.4e-06 56.6 43 67.4
C02p17950 Brassica napus HOM05D002873 ORTHO05D002978 1.4e-06 56.6 43 67.4
BolC2t07926H Brassica oleracea HOM05D002873 ORTHO05D002978 1.4e-06 56.6 43 67.4
Haze_17643 Corylus avellana HOM05D002873 ORTHO05D002978 1.4e-06 56.6 44 65.9
MELO3C022079.2 Cucumis melo HOM05D002873 ORTHO05D002978 1.4e-06 56.6 35 82.9
Sabra04G0074600 Salix brachista HOM05D002873 ORTHO05D002978 1.8e-06 56.2 34 82.4
Sc10g0001460 Simmondsia chinensis HOM05D002873 ORTHO05D002978 1.8e-06 56.2 39 74.4
Sopen02g034300 Solanum pennellii HOM05D002873 ORTHO05D002978 1.8e-06 56.2 111 37.8
Peaxi162Scf00019g00065 Petunia axillaris HOM05D002873 ORTHO05D002978 2.4e-06 55.8 40 67.5
Sopen02g027770 Solanum pennellii HOM05D002873 ORTHO05D002978 2.4e-06 55.8 40 67.5
PGSC0003DMG400001534 Solanum tuberosum HOM05D002873 ORTHO05D002978 2.4e-06 55.8 40 67.5
Peaxi162Scf00479g00423 Petunia axillaris HOM05D002873 ORTHO05D002978 3.1e-06 55.5 38 71.1
CARHR288730 Cardamine hirsuta HOM05D002873 ORTHO05D002978 4.1e-06 55.1 38 73.7
Peaxi162Scf00479g00055 Petunia axillaris HOM05D002873 ORTHO05D002978 4.1e-06 55.1 111 36.9
Solyc02g082990.4 Solanum lycopersicum HOM05D002873 ORTHO05D002978 4.1e-06 55.1 39 69.2
Rhsim08G0081300 Rhododendron simsii HOM05D002873 ORTHO05D002978 5.3e-06 54.7 40 67.5
Actinidia18105 Actinidia chinensis HOM05D002873 ORTHO05D002978 6.9e-06 54.3 40 65.0
Actinidia36291 Actinidia chinensis HOM05D002873 ORTHO05D002978 6.9e-06 54.3 40 65.0
CiPaw.03G007000 Carya illinoinensis HOM05D002873 ORTHO05D002978 6.9e-06 54.3 36 77.8
Actinidia26314 Actinidia chinensis HOM05D002873 ORTHO05D002978 9.1e-06 53.9 111 45.0
arahy.Tifrunner.gnm1.ann1.4T36CH Arachis hypogaea HOM05D002873 ORTHO05D002978 9.1e-06 53.9 109 36.7
arahy.Tifrunner.gnm1.ann1.JTM1YJ Arachis hypogaea HOM05D002873 ORTHO05D002978 9.1e-06 53.9 109 36.7
Cfa007996 Carpinus fangiana HOM05D002873 ORTHO05D002978 9.1e-06 53.9 38 73.7
Ca_06717_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 9.1e-06 53.9 106 36.8
Potri.017G108300 Populus trichocarpa HOM05D002873 ORTHO05D002978 9.1e-06 53.9 33 78.8
Potri.017G108350 Populus trichocarpa HOM05D002873 ORTHO05D002978 9.1e-06 53.9 33 78.8


User provided reference genes

Program Settings