Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G4263 Fragaria x ananassa HOM05D008314 ORTHO05D010369 5.9e-49 197.2 99 100.0
FvH4_6g35740 Fragaria vesca HOM05D008314 ORTHO05D010369 1.3e-48 196.1 99 99.0
FAN05G1710 Fragaria x ananassa HOM05D008314 ORTHO05D010369 4.0e-45 184.5 99 93.9
FAN02G2954 Fragaria x ananassa HOM05D008314 ORTHO05D010369 4.1e-42 174.5 97 89.7
RcHm_v2.0_Chr2g0147741 Rosa chinensis HOM05D008314 ORTHO05D010369 2.7e-41 171.8 99 86.9
Prupe.3G031600 Prunus persica HOM05D008314 ORTHO05D010369 5.8e-20 100.9 106 55.7
CSS0041009 Camellia sinensis var. sinensis HOM05D008314 ORTHO05D010369 2.7e-17 92.0 97 53.6
Oeu008398.2 Olea europaea HOM05D008314 ORTHO05D010369 1.3e-16 89.7 95 53.7
Cc04_g00790 Coffea canephora HOM05D008314 ORTHO05D010369 2.3e-16 89.0 90 51.1
Duzib235G1505 Durio zibethinus HOM05D008314 ORTHO05D010369 5.0e-16 87.8 95 52.6
Nn6g35721 Nelumbo nucifera HOM05D008314 ORTHO05D010369 1.1e-15 86.7 95 48.4
Oeu059021.1 Olea europaea HOM05D008314 ORTHO05D010369 1.9e-15 85.9 95 52.6
Dinv37824 Davidia involucrata HOM05D008314 ORTHO05D010369 4.3e-15 84.7 95 49.5
Manes.11G013300 Manihot esculenta HOM05D008314 ORTHO05D010369 4.3e-15 84.7 95 46.3
Thecc.03G325500 Theobroma cacao HOM05D008314 ORTHO05D010369 4.3e-15 84.7 95 51.6
Cpa.g.sc25.184 Carica papaya HOM05D008314 ORTHO05D010369 7.3e-15 84.0 95 47.4
QL05p001376 Quercus lobata HOM05D008314 ORTHO05D010369 9.5e-15 83.6 97 47.4
CiPaw.01G212000 Carya illinoinensis HOM05D008314 ORTHO05D010369 1.6e-14 82.8 94 50.0
Actinidia24433 Actinidia chinensis HOM05D008314 ORTHO05D010369 2.1e-14 82.4 95 51.6
MBI13_g01687_MAGBIO Magnolia biondii HOM05D008314 ORTHO05D010369 6.2e-14 80.9 75 53.3
Potri.003G072000 Populus trichocarpa HOM05D008314 ORTHO05D010369 2.3e-13 79.0 95 45.3
Sed0005090 Sechium edule HOM05D008314 ORTHO05D010369 2.3e-13 79.0 96 46.9
Thecc.06G129300 Theobroma cacao HOM05D008314 ORTHO05D010369 3.1e-13 78.6 95 50.5
ClCG09G001340 Citrullus lanatus HOM05D008314 ORTHO05D010369 4.0e-13 78.2 95 47.4
Rhsim12G0213100 Rhododendron simsii HOM05D008314 ORTHO05D010369 5.2e-13 77.8 97 49.5
SalBow6G0833 Salvia bowleyana HOM05D008314 ORTHO05D010369 5.2e-13 77.8 92 48.9
Phvul.010G123800 Phaseolus vulgaris HOM05D008314 ORTHO05D010369 1.5e-12 76.3 95 45.3
MELO3C024311.2 Cucumis melo HOM05D008314 ORTHO05D010369 2.0e-12 75.9 99 44.4
arahy.Tifrunner.gnm1.ann1.K03VIU Arachis hypogaea HOM05D008314 ORTHO05D010369 2.6e-12 75.5 100 44.0
arahy.Tifrunner.gnm1.ann1.0KI29H Arachis hypogaea HOM05D008314 ORTHO05D010369 3.4e-12 75.1 100 44.0
Rhsim08G0244000 Rhododendron simsii HOM05D008314 ORTHO05D010369 4.4e-12 74.7 101 43.6
Gohir.A06G143350 Gossypium hirsutum HOM05D008314 ORTHO05D010369 5.8e-12 74.3 96 44.8
Atru.chr1.4110 Acer truncatum HOM05D008314 ORTHO05D010369 1.3e-11 73.2 98 42.9
Gohir.D06G149000 Gossypium hirsutum HOM05D008314 ORTHO05D010369 1.3e-11 73.2 43 69.8
COL.COLO4_30857 Corchorus olitorius HOM05D008314 ORTHO05D010369 1.7e-11 72.8 68 55.9
PSO724G1385 Papaver somniferum HOM05D008314 ORTHO05D010369 1.7e-11 72.8 87 43.7
Duzib160G0115 Durio zibethinus HOM05D008314 ORTHO05D010369 2.2e-11 72.4 86 45.3
Gorai.010G173500 Gossypium raimondii HOM05D008314 ORTHO05D010369 2.2e-11 72.4 97 45.4
Lalb_Chr17g0343301 Lupinus albus HOM05D008314 ORTHO05D010369 2.2e-11 72.4 85 44.7
PSO135G0082 Papaver somniferum HOM05D008314 ORTHO05D010369 2.2e-11 72.4 86 41.9
CsaV3_7G033990 Cucumis sativus L. HOM05D008314 ORTHO05D010369 2.9e-11 72.0 77 48.1
MD09G1173500 Malus domestica HOM05D008314 ORTHO05D010369 3.7e-11 71.6 94 47.9
TAR070G0001 Trochodendron aralioides HOM05D008314 ORTHO05D010369 6.4e-11 70.9 83 44.6
TWI14G0587 Tripterygium wilfordii HOM05D008314 ORTHO05D010369 1.1e-10 70.1 95 41.1
Glyma.16G013200 Glycine max HOM05D008314 ORTHO05D010369 1.9e-10 69.3 95 46.3
Duzib160G0571 Durio zibethinus HOM05D008314 ORTHO05D010369 2.4e-10 68.9 95 47.4
ATR0099G003 Amborella trichopoda HOM05D008314 ORTHO05D010369 9.2e-10 67.0 84 41.7
CiPaw.01G212100 Carya illinoinensis HOM05D008314 ORTHO05D010369 1.6e-09 66.2 102 41.2
AUR62001414 Chenopodium quinoa HOM05D008314 ORTHO05D010369 2.7e-09 65.5 93 36.6
Oeu059020.1 Olea europaea HOM05D008314 ORTHO05D010369 2.7e-09 65.5 36 77.8
Ciclev10027008m.g Citrus clementina HOM05D008314 ORTHO05D010369 3.5e-09 65.1 93 46.2
Os02g0564600 Oryza sativa ssp. japonica HOM05D008314 ORTHO05D010369 1.0e-08 63.5 35 68.6
AUR62025623 Chenopodium quinoa HOM05D008314 ORTHO05D010369 1.3e-08 63.2 93 34.4
Ciclev10026853m.g Citrus clementina HOM05D008314 ORTHO05D010369 1.7e-08 62.8 95 44.2
Medtr8g022990 Medicago truncatula HOM05D008314 ORTHO05D010369 1.7e-08 62.8 89 41.6
Psat4g165800 Pisum sativum HOM05D008314 ORTHO05D010369 3.9e-08 61.6 33 69.7
SEGI_28829 Sequoiadendron giganteum HOM05D008314 ORTHO05D010369 3.9e-08 61.6 32 71.9
Zm00001eb019440 Zea mays HOM05D008314 ORTHO05D010369 3.9e-08 61.6 56 46.4
Os03g0400700 Oryza sativa ssp. japonica HOM05D008314 ORTHO05D010369 3.3e-07 58.5 84 40.5
SEGI_18497 Sequoiadendron giganteum HOM05D042000 ORTHO05D010369 3.3e-07 58.5 41 56.1
SEGI_22804 Sequoiadendron giganteum HOM05D042000 ORTHO05D010369 1.2e-06 56.6 45 48.9
SEGI_24113 Sequoiadendron giganteum HOM05D042000 ORTHO05D010369 2.1e-06 55.8 45 46.7
Zm00001eb182560 Zea mays HOM05D008314 ORTHO05D010369 3.6e-06 55.1 33 66.7


User provided reference genes

Program Settings