Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G2105 Fragaria x ananassa HOM05D018771 ORTHO05D000521 9.0e-130 466.8 223 100.0
FAN09G4071 Fragaria x ananassa HOM05D018771 ORTHO05D000521 9.0e-130 466.8 223 100.0
FAN14G1599 Fragaria x ananassa HOM05D018771 ORTHO05D000521 7.0e-98 360.9 302 63.2
FAN05G3966 Fragaria x ananassa HOM05D018771 ORTHO05D000521 2.0e-76 289.7 169 84.0
FvH4_6g27870 Fragaria vesca HOM05D018771 ORTHO05D000521 4.5e-73 278.5 169 79.9
Prupe.3G112400 Prunus persica HOM05D000007 ORTHO05D000521 9.6e-39 164.5 294 37.8
RcHm_v2.0_Chr2g0131131 Rosa chinensis HOM05D000007 ORTHO05D000521 2.4e-34 149.8 301 32.9
MD01G1181800 Malus domestica HOM05D000007 ORTHO05D000521 3.2e-34 149.4 288 36.1
Prupe.3G111700 Prunus persica HOM05D000007 ORTHO05D000521 8.7e-32 141.4 171 46.8
MD17G1263300 Malus domestica HOM05D000007 ORTHO05D000521 5.3e-29 132.1 298 31.5
Prupe.3G112200 Prunus persica HOM05D000007 ORTHO05D000521 6.9e-29 131.7 174 43.1
Hma1.2p1_1251F.1_g270330 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 7.6e-28 128.3 292 33.6
Hma1.2p1_1251F.1_g270320 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 6.4e-27 125.2 292 30.8
Prupe.3G112000 Prunus persica HOM05D000007 ORTHO05D000521 5.4e-26 122.1 182 39.0
Haze_08062 Corylus avellana HOM05D000007 ORTHO05D000521 1.8e-24 117.1 189 33.9
Dinv34353 Davidia involucrata HOM05D000007 ORTHO05D000521 1.8e-24 117.1 315 28.9
Haze_08061 Corylus avellana HOM05D000007 ORTHO05D000521 8.7e-24 114.8 193 34.7
Hma1.2p1_0270F.1_g108160 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 1.5e-23 114.0 302 28.5
Rhsim07G0064100 Rhododendron simsii HOM05D000007 ORTHO05D000521 3.6e-22 109.4 232 29.3
Rhsim01G0070300 Rhododendron simsii HOM05D000007 ORTHO05D000521 4.8e-22 109.0 316 27.5
Rhsim07G0064200 Rhododendron simsii HOM05D000007 ORTHO05D000521 9.0e-21 104.8 232 29.3
Rhsim07G0064300 Rhododendron simsii HOM05D000007 ORTHO05D000521 4.5e-20 102.4 309 25.2
Rhsim07G0063800 Rhododendron simsii HOM05D000007 ORTHO05D000521 9.9e-20 101.3 277 27.4
CANSAT64G1494 Cannabis sativa HOM05D000007 ORTHO05D000521 2.9e-19 99.8 288 29.5
FvH4_6g28330 Fragaria vesca HOM05D000007 ORTHO05D000676 1.6e-17 94.0 229 29.7
CSS0008530 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 3.5e-17 92.8 183 30.1
CSS0043567 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 3.5e-17 92.8 183 30.1
Rhsim07G0064500 Rhododendron simsii HOM05D000007 ORTHO05D000521 6.0e-17 92.0 319 24.5
Rhsim07G0064600 Rhododendron simsii HOM05D000007 ORTHO05D000521 6.0e-17 92.0 215 27.0
Rhsim01G0071900 Rhododendron simsii HOM05D000007 ORTHO05D000521 1.8e-16 90.5 180 31.7
Medtr5g007940 Medicago truncatula HOM05D000007 ORTHO05D000521 3.0e-16 89.7 209 29.2
FAN02G0113 Fragaria x ananassa HOM05D000007 ORTHO05D000521 6.7e-16 88.6 229 29.3
Rhsim07G0063400 Rhododendron simsii HOM05D018771 ORTHO05D000521 1.1e-15 87.8 89 42.7
Lalb_Chr17g0348371 Lupinus albus HOM05D000007 ORTHO05D000521 1.9e-15 87.0 232 28.0
FAN05G3533 Fragaria x ananassa HOM05D018771 ORTHO05D029697 9.6e-15 84.7 41 97.6
CANSAT64G2453 Cannabis sativa HOM05D000007 ORTHO05D000521 1.6e-14 84.0 309 25.9
Rhsim07G0063600 Rhododendron simsii HOM05D000007 ORTHO05D000521 6.2e-14 82.0 196 26.5
TPR.G13135 Trifolium pratense HOM05D000007 ORTHO05D000521 1.1e-13 81.3 291 24.4
QL06p035449 Quercus lobata HOM05D000007 ORTHO05D000521 1.8e-13 80.5 181 29.3
Lalb_Chr03g0040301 Lupinus albus HOM05D000007 ORTHO05D000521 9.0e-13 78.2 184 29.9
Lalb_Chr03g0040311 Lupinus albus HOM05D000007 ORTHO05D000521 9.0e-13 78.2 184 29.9
Medtr7g090810 Medicago truncatula HOM05D000007 ORTHO05D000521 2.0e-12 77.0 190 29.5
Rhsim01G0070200 Rhododendron simsii HOM05D000007 ORTHO05D000521 2.0e-12 77.0 99 38.4
TPR.G18189 Trifolium pratense HOM05D000007 ORTHO05D000521 2.6e-12 76.6 200 27.5
Medtr5g022900 Medicago truncatula HOM05D000007 ORTHO05D000521 4.5e-12 75.9 241 27.0
Psat0s3499g0120 Pisum sativum HOM05D000007 ORTHO05D000521 4.5e-12 75.9 237 25.3
Ciclev10011634m.g Citrus clementina HOM05D000007 ORTHO05D000521 5.8e-12 75.5 184 29.3
Medtr5g021880 Medicago truncatula HOM05D000007 ORTHO05D000521 7.6e-12 75.1 200 28.5
Medtr5g022045 Medicago truncatula HOM05D000007 ORTHO05D000521 7.6e-12 75.1 185 28.1
Cfa010369 Carpinus fangiana HOM05D000007 ORTHO05D000521 1.0e-11 74.7 301 24.6
Medtr5g021860 Medicago truncatula HOM05D000007 ORTHO05D000521 1.3e-11 74.3 197 27.9
TPR.G18192 Trifolium pratense HOM05D000007 ORTHO05D000521 1.7e-11 73.9 254 25.6
Cfa014274 Carpinus fangiana HOM05D000007 ORTHO05D000521 3.8e-11 72.8 250 24.4
CANSAT64G2796 Cannabis sativa HOM05D000007 ORTHO05D000676 4.9e-11 72.4 312 22.8
Sabra01G0099300 Salix brachista HOM05D000007 ORTHO05D000521 4.9e-11 72.4 174 28.2
Medtr4g027370 Medicago truncatula HOM05D000007 ORTHO05D000521 8.4e-11 71.6 197 26.9
TPR.G18184 Trifolium pratense HOM05D000007 ORTHO05D000521 8.4e-11 71.6 245 24.9
Haze_03323 Corylus avellana HOM05D000007 ORTHO05D000521 1.1e-10 71.2 284 23.9
TPR.G12142 Trifolium pratense HOM05D002637 ORTHO05D009046 1.4e-10 70.9 110 35.5
TPR.G37785 Trifolium pratense HOM05D000007 ORTHO05D000521 1.9e-10 70.5 183 29.5
Rhsim01G0071800 Rhododendron simsii HOM05D000007 ORTHO05D000521 4.2e-10 69.3 203 27.6
Cfa014273 Carpinus fangiana HOM05D000007 ORTHO05D000521 5.5e-10 68.9 177 25.4
TPR.G30748 Trifolium pratense HOM05D000007 ORTHO05D000521 7.1e-10 68.6 184 25.0
Potri.001G129200 Populus trichocarpa HOM05D000007 ORTHO05D000521 1.2e-09 67.8 97 36.1
Lj8A117T66 Lonicera japonica HOM05D000007 ORTHO05D000521 1.6e-09 67.4 246 24.8
TPR.G29403 Trifolium pratense HOM05D000007 ORTHO05D000521 2.7e-09 66.6 250 24.0
Medtr5g022090 Medicago truncatula HOM05D000007 ORTHO05D000521 3.5e-09 66.2 192 25.0
TPR.G14415 Trifolium pratense HOM05D000007 ORTHO05D000521 1.8e-08 63.9 196 24.5
RhsimUnG0082800 Rhododendron simsii HOM05D000007 ORTHO05D000521 2.3e-08 63.5 234 27.8
Psat0s3499g0040 Pisum sativum HOM05D000007 ORTHO05D000521 3.0e-08 63.2 116 31.0
Dinv29686 Davidia involucrata HOM05D000007 ORTHO05D000521 5.1e-08 62.4 231 23.8
Cpa.g.sc483.2 Carica papaya HOM05D000007 ORTHO05D000521 6.7e-08 62.0 177 27.1
Medtr5g022040 Medicago truncatula HOM05D000007 ORTHO05D000521 6.7e-08 62.0 182 27.5
TPR.G4156 Trifolium pratense HOM05D000007 ORTHO05D000521 6.7e-08 62.0 114 29.8
Medtr5g027330 Medicago truncatula HOM05D000007 ORTHO05D000521 8.7e-08 61.6 238 26.9
Medtr5g027370 Medicago truncatula HOM05D000007 ORTHO05D000521 8.7e-08 61.6 238 26.9
CSS0040081 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 1.9e-07 60.5 175 25.7
Ca_24912_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000521 1.9e-07 60.5 193 23.3
Ca_24932_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000521 1.9e-07 60.5 193 23.3
Psat2g140960 Pisum sativum HOM05D000007 ORTHO05D000521 2.5e-07 60.1 97 34.0
vmacro09383 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 2.5e-07 60.1 197 22.3
DCAR_022309 Daucus carota HOM05D000007 ORTHO05D000521 3.3e-07 59.7 178 24.2
TPR.G17766 Trifolium pratense HOM05D000007 ORTHO05D000521 4.3e-07 59.3 231 22.9
SalBow7G3915 Salvia bowleyana HOM05D000007 ORTHO05D000521 5.7e-07 58.9 191 25.7
CSS0029460 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 7.4e-07 58.5 169 27.8
TPR.G34402 Trifolium pratense HOM05D000007 ORTHO05D000521 9.6e-07 58.2 234 23.9
CSS0006709 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 1.6e-06 57.4 175 25.1
FAN02G2781 Fragaria x ananassa HOM05D000007 ORTHO05D029697 4.8e-06 55.8 40 70.0
Lj8A0T15 Lonicera japonica HOM05D000007 ORTHO05D000521 8.2e-06 55.1 261 22.2


User provided reference genes

Program Settings