Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G3916 Fragaria x ananassa HOM05D002815 ORTHO05D035542 7.2e-37 156.8 80 100.0
FvH4_6g03222 Fragaria vesca HOM05D002815 ORTHO05D035542 1.2e-23 112.8 60 93.3
RcHm_v2.0_Chr3g0451591 Rosa chinensis HOM05D002815 ORTHO05D035542 1.0e-11 73.2 51 76.5
Ciclev10025987m.g Citrus clementina HOM05D002815 ORTHO05D003409 1.3e-06 56.2 52 50.0
PSO204G0001 Papaver somniferum HOM05D002815 ORTHO05D003409 1.3e-06 56.2 46 56.5
Potri.007G082000 Populus trichocarpa HOM05D002815 ORTHO05D003409 1.3e-06 56.2 46 54.3
Sc07g0001510 Simmondsia chinensis HOM05D002815 ORTHO05D003409 1.3e-06 56.2 52 53.8
PSO210G7429 Papaver somniferum HOM05D002815 ORTHO05D003409 1.7e-06 55.8 46 52.2
PSO447G0121 Papaver somniferum HOM05D002815 ORTHO05D003409 1.7e-06 55.8 46 52.2
Sc03g0004290 Simmondsia chinensis HOM05D002815 ORTHO05D003409 1.7e-06 55.8 52 50.0
Ah.02g124410 Amaranthus hybridus HOM05D002815 ORTHO05D003409 2.2e-06 55.5 52 51.9
Lalb_Chr12g0203561 Lupinus albus HOM05D002815 ORTHO05D003409 2.2e-06 55.5 46 56.5
SalBow5G2996 Salvia bowleyana HOM05D002815 ORTHO05D003409 2.2e-06 55.5 45 53.3
Lj4g0018156 Lotus japonicus HOM05D002815 ORTHO05D003409 2.9e-06 55.1 46 54.3
Cc07_g16040 Coffea canephora HOM05D002815 ORTHO05D003409 3.8e-06 54.7 46 52.2
AL8G42410 Arabidopsis lyrata HOM05D002815 ORTHO05D003409 5.0e-06 54.3 47 48.9
arahy.Tifrunner.gnm1.ann1.HMT8RT Arachis hypogaea HOM05D002815 ORTHO05D003409 5.0e-06 54.3 46 54.3
arahy.Tifrunner.gnm1.ann1.U2FY0G Arachis hypogaea HOM05D002815 ORTHO05D003409 5.0e-06 54.3 46 54.3
EL10Ac6g14745 Beta vulgaris HOM05D002815 ORTHO05D003409 5.0e-06 54.3 44 54.5
AUR62003313 Chenopodium quinoa HOM05D002815 ORTHO05D003409 5.0e-06 54.3 44 52.3
AUR62016270 Chenopodium quinoa HOM05D002815 ORTHO05D003409 5.0e-06 54.3 44 52.3
Ca_17698_v3 Cicer arietinum L. HOM05D002815 ORTHO05D003409 5.0e-06 54.3 46 54.3
CsaV3_6G045970 Cucumis sativus L. HOM05D002815 ORTHO05D003409 5.0e-06 54.3 46 54.3
Glyma.05G183300 Glycine max HOM05D002815 ORTHO05D003409 5.0e-06 54.3 46 54.3
Glyma.08G141100 Glycine max HOM05D002815 ORTHO05D003409 5.0e-06 54.3 46 52.2
Lj1g0001740 Lotus japonicus HOM05D002815 ORTHO05D003409 5.0e-06 54.3 46 54.3
Prupe.6G174800 Prunus persica HOM05D002815 ORTHO05D003409 5.0e-06 54.3 46 54.3
Aqoxy5G01953 Aquilegia oxysepala HOM05D002815 ORTHO05D003409 6.5e-06 53.9 46 52.2
MSTRG.3807 Avicennia marina HOM05D002815 ORTHO05D003409 6.5e-06 53.9 45 51.1
CARHR278950 Cardamine hirsuta HOM05D002815 ORTHO05D003409 6.5e-06 53.9 47 46.8
Duzib147G1220 Durio zibethinus HOM05D002815 ORTHO05D003409 6.5e-06 53.9 46 52.2
Thhalv10013514m.g Eutrema salsugineum HOM05D002815 ORTHO05D003409 6.5e-06 53.9 46 52.2
Glyma.04G220100 Glycine max HOM05D002815 ORTHO05D003409 6.5e-06 53.9 46 54.3
MD15G1083500 Malus domestica HOM05D002815 ORTHO05D003409 6.5e-06 53.9 46 47.8
Oeu030686.2 Olea europaea HOM05D002815 ORTHO05D003409 6.5e-06 53.9 45 51.1
Psat7g052080 Pisum sativum HOM05D002815 ORTHO05D003409 6.5e-06 53.9 46 52.2
Prupe.1G436000 Prunus persica HOM05D002815 ORTHO05D003409 6.5e-06 53.9 46 50.0
QL06p032363 Quercus lobata HOM05D002815 ORTHO05D003409 6.5e-06 53.9 46 52.2
Sp6g33390 Schrenkiella parvula HOM05D002815 ORTHO05D003409 6.5e-06 53.9 46 52.2
TWI53G1894 Tripterygium wilfordii HOM05D002815 ORTHO05D003409 6.5e-06 53.9 46 52.2
TWI77G0240 Tripterygium wilfordii HOM05D002815 ORTHO05D003409 6.5e-06 53.9 46 52.2
BcaB05g21515 Brassica carinata HOM05D002815 ORTHO05D003409 8.5e-06 53.5 63 44.4
Duzib187G1281 Durio zibethinus HOM05D002815 ORTHO05D003409 8.5e-06 53.5 46 50.0
Migut.H02424 Erythranthe guttata HOM05D002815 ORTHO05D003409 8.5e-06 53.5 45 51.1
Gohir.A12G092900 Gossypium hirsutum HOM05D002815 ORTHO05D003409 8.5e-06 53.5 46 50.0
Gorai.008G102000 Gossypium raimondii HOM05D002815 ORTHO05D003409 8.5e-06 53.5 46 50.0
Lalb_Chr13g0296181 Lupinus albus HOM05D002815 ORTHO05D003409 8.5e-06 53.5 46 54.3
Oeu028529.1 Olea europaea HOM05D002815 ORTHO05D003409 8.5e-06 53.5 45 51.1
Phvul.002G264400 Phaseolus vulgaris HOM05D002815 ORTHO05D003409 8.5e-06 53.5 46 54.3
Thecc.01G111500 Theobroma cacao HOM05D002815 ORTHO05D003409 8.5e-06 53.5 46 50.0
TAR628G0035 Trochodendron aralioides HOM05D002815 ORTHO05D003409 8.5e-06 53.5 46 50.0
unitig_736.g22623 Utricularia gibba HOM05D002815 ORTHO05D003409 8.5e-06 53.5 46 50.0


User provided reference genes

Program Settings