Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G3864 Fragaria x ananassa HOM05D036894 ORTHO05D002507 1.7e-151 539.3 259 100.0
FvH4_6g04020 Fragaria vesca HOM05D036894 ORTHO05D045765 8.5e-47 191.4 122 76.2
FAN05G3960 Fragaria x ananassa HOM05D036894 ORTHO05D045765 1.4e-41 174.1 122 72.1
FAN05G4187 Fragaria x ananassa HOM05D052596 ORTHO05D002507 4.2e-38 162.5 84 91.7
FAN05G1285 Fragaria x ananassa HOM05D000040 ORTHO05D002507 2.2e-18 97.1 92 52.2
FAN09G1688 Fragaria x ananassa HOM05D000040 ORTHO05D002507 4.8e-18 95.9 90 53.3
FAN09G2355 Fragaria x ananassa HOM05D000040 ORTHO05D002507 4.8e-18 95.9 92 51.1
FvH4_6g04040 Fragaria vesca HOM05D000040 ORTHO05D002507 6.3e-18 95.5 92 51.1
FvH4_6g04030 Fragaria vesca HOM05D000040 ORTHO05D002507 2.4e-17 93.6 90 53.3
FAN05G5639 Fragaria x ananassa HOM05D000040 ORTHO05D002507 4.1e-17 92.8 85 54.1
FAN09G3269 Fragaria x ananassa HOM05D000040 ORTHO05D002507 1.0e-15 88.2 72 56.9
QL03p011674 Quercus lobata HOM05D000040 ORTHO05D002507 2.1e-13 80.5 86 45.3
FAN04G0291 Fragaria x ananassa HOM05D000040 ORTHO05D012518 6.1e-13 79.0 85 47.1
FAN13G0692 Fragaria x ananassa HOM05D000040 ORTHO05D012518 6.1e-13 79.0 85 47.1
Cfa006492 Carpinus fangiana HOM05D000001 ORTHO05D000003 8.9e-12 75.1 129 33.3
FAN09G0755 Fragaria x ananassa HOM05D000040 ORTHO05D002507 4.4e-11 72.8 131 35.1
QL01p001873 Quercus lobata HOM05D000040 ORTHO05D002507 3.7e-10 69.7 89 36.0
Migut.D00175 Erythranthe guttata HOM05D000040 ORTHO05D002507 6.3e-10 68.9 90 35.6
Ciclev10003739m.g Citrus clementina HOM05D000040 ORTHO05D002507 8.3e-10 68.6 88 42.0
SEGI_06536 Sequoiadendron giganteum HOM05D000040 ORTHO05D000267 1.8e-09 67.4 87 37.9
Ciclev10004014m.g Citrus clementina HOM05D000040 ORTHO05D002507 2.4e-09 67.0 88 40.9
Migut.D00158 Erythranthe guttata HOM05D000040 ORTHO05D002507 1.2e-08 64.7 93 35.5
PGR083G1697 Punica granatum HOM05D000040 ORTHO05D002507 1.2e-08 64.7 89 36.0
SalBow8G0827 Salvia bowleyana HOM05D000040 ORTHO05D002507 1.6e-08 64.3 82 36.6
Migut.D00156 Erythranthe guttata HOM05D000040 ORTHO05D002507 2.0e-08 63.9 93 35.5
Medtr2g070430 Medicago truncatula HOM05D000040 ORTHO05D002507 2.0e-08 63.9 92 40.2
Pp3c19_10740 Physcomitrium patens HOM05D000040 ORTHO05D000267 2.0e-08 63.9 84 36.9
Psat4g161080 Pisum sativum HOM05D000040 ORTHO05D000759 2.7e-08 63.5 87 35.6
Aqoxy2G03085 Aquilegia oxysepala HOM05D000040 ORTHO05D002507 3.5e-08 63.2 82 35.4
Migut.M00590 Erythranthe guttata HOM05D000040 ORTHO05D002507 3.5e-08 63.2 83 42.2
Mapoly0185s0028 Marchantia polymorpha HOM05D000040 ORTHO05D000267 3.5e-08 63.2 82 39.0
PSO017G3389 Papaver somniferum HOM05D000040 ORTHO05D002507 4.5e-08 62.8 87 35.6
Migut.D00715 Erythranthe guttata HOM05D000040 ORTHO05D002507 5.9e-08 62.4 93 34.4
TWI38G0933 Tripterygium wilfordii HOM05D000040 ORTHO05D000267 5.9e-08 62.4 86 34.9
TWI39G0246 Tripterygium wilfordii HOM05D000040 ORTHO05D000267 5.9e-08 62.4 82 35.4
TAR369G1147 Trochodendron aralioides HOM05D000040 ORTHO05D002507 5.9e-08 62.4 83 36.1
QL03p025648 Quercus lobata HOM05D000040 ORTHO05D002507 7.8e-08 62.0 75 45.3
FAN09G4133 Fragaria x ananassa HOM05D000040 ORTHO05D012518 1.3e-07 61.2 90 42.2
TWI79G1753 Tripterygium wilfordii HOM05D000040 ORTHO05D000267 1.3e-07 61.2 84 34.5
ATR1096G019 Amborella trichopoda HOM05D000040 ORTHO05D000267 1.7e-07 60.8 87 36.8
Ciclev10008284m.g Citrus clementina HOM05D000040 ORTHO05D002507 1.7e-07 60.8 88 37.5
PSO675G6800 Papaver somniferum HOM05D000040 ORTHO05D002507 2.3e-07 60.5 84 38.1
PSO732G0067 Papaver somniferum HOM05D000040 ORTHO05D002507 2.3e-07 60.5 84 34.5
TWI32G1186 Tripterygium wilfordii HOM05D000040 ORTHO05D000267 2.3e-07 60.5 84 33.3
TWI73G0264 Tripterygium wilfordii HOM05D000040 ORTHO05D000267 2.3e-07 60.5 81 34.6
TWI79G1199 Tripterygium wilfordii HOM05D000040 ORTHO05D000267 2.3e-07 60.5 84 32.1
TWI79G1215 Tripterygium wilfordii HOM05D000040 ORTHO05D000267 2.3e-07 60.5 80 35.0
TAR633G1183 Trochodendron aralioides HOM05D000040 ORTHO05D010772 2.3e-07 60.5 84 36.9
Gohir.D13G127100 Gossypium hirsutum HOM05D000040 ORTHO05D000267 2.9e-07 60.1 83 32.5
Glyma.15G260600 Glycine max HOM05D000040 ORTHO05D000267 3.9e-07 59.7 85 34.1
PSO675G5976 Papaver somniferum HOM05D000040 ORTHO05D002507 3.9e-07 59.7 84 36.9
TWI15G0795 Tripterygium wilfordii HOM05D000040 ORTHO05D000267 3.9e-07 59.7 88 35.2
HPP92_015135 Vanilla planifolia HOM05D000040 ORTHO05D000267 3.9e-07 59.7 89 32.6
Aqoxy4G00804 Aquilegia oxysepala HOM05D000040 ORTHO05D002507 5.0e-07 59.3 81 30.9
PSO675G5583 Papaver somniferum HOM05D000040 ORTHO05D002507 5.0e-07 59.3 69 42.0
PSO675G8549 Papaver somniferum HOM05D000040 ORTHO05D002507 5.0e-07 59.3 84 36.9
Cpa.g.sc80.48 Carica papaya HOM05D000040 ORTHO05D002507 6.6e-07 58.9 85 34.1
Gorai.013G142300 Gossypium raimondii HOM05D000040 ORTHO05D000267 6.6e-07 58.9 83 31.3
Lsat_1_v5_gn_1_115840 Lactuca sativa HOM05D000040 ORTHO05D002000 6.6e-07 58.9 85 34.1
TAR633G0307 Trochodendron aralioides HOM05D000040 ORTHO05D010772 6.6e-07 58.9 85 37.6
TAR633G0626 Trochodendron aralioides HOM05D000040 ORTHO05D010772 6.6e-07 58.9 84 36.9
Aqoxy2G02605 Aquilegia oxysepala HOM05D000040 ORTHO05D002507 8.6e-07 58.5 85 34.1
Migut.M00592 Erythranthe guttata HOM05D000040 ORTHO05D002507 8.6e-07 58.5 86 33.7
FAN02G0599 Fragaria x ananassa HOM05D000040 ORTHO05D012518 8.6e-07 58.5 90 42.2
Mapoly0185s0032 Marchantia polymorpha HOM05D000040 ORTHO05D000267 8.6e-07 58.5 81 38.3
Nn3g19192 Nelumbo nucifera HOM05D000040 ORTHO05D000267 8.6e-07 58.5 83 36.1
Sed0028208 Sechium edule HOM05D000040 ORTHO05D034987 8.6e-07 58.5 85 35.3
SMO172G0087 Selaginella moellendorffii HOM05D000040 ORTHO05D021283 8.6e-07 58.5 93 34.4
TWI14G0120 Tripterygium wilfordii HOM05D000040 ORTHO05D000267 8.6e-07 58.5 81 30.9
TWI74G0114 Tripterygium wilfordii HOM05D000040 ORTHO05D000267 8.6e-07 58.5 81 33.3
C03p03460 Brassica napus HOM05D000040 ORTHO05D002000 1.1e-06 58.2 88 33.0
BolC3t12888H Brassica oleracea HOM05D000040 ORTHO05D002000 1.1e-06 58.2 88 33.0
Mapoly0177s0021 Marchantia polymorpha HOM05D000040 ORTHO05D000267 1.1e-06 58.2 81 37.0
Mapoly0185s0031 Marchantia polymorpha HOM05D000040 ORTHO05D000267 1.1e-06 58.2 81 37.0
Pp3c13_14230 Physcomitrium patens HOM05D000040 ORTHO05D000267 1.1e-06 58.2 86 34.9
TAR633G0332 Trochodendron aralioides HOM05D000040 ORTHO05D012398 1.1e-06 58.2 88 30.7
Atru.chr2.2706 Acer truncatum HOM05D000040 ORTHO05D002507 1.5e-06 57.8 83 36.1
A03p03070 Brassica napus HOM05D000040 ORTHO05D002000 1.5e-06 57.8 88 33.0
BraA03t09664Z Brassica rapa HOM05D000040 ORTHO05D002000 1.5e-06 57.8 88 33.0
Gohir.A13G123200 Gossypium hirsutum HOM05D000040 ORTHO05D000267 1.5e-06 57.8 83 32.5
Ah.10g030280 Amaranthus hybridus HOM05D000040 ORTHO05D002000 1.9e-06 57.4 85 34.1
ATR1096G073 Amborella trichopoda HOM05D000040 ORTHO05D000267 1.9e-06 57.4 91 34.1
Nn1g09703 Nelumbo nucifera HOM05D000040 ORTHO05D000267 1.9e-06 57.4 84 35.7
PSO421G0594 Papaver somniferum HOM05D000040 ORTHO05D002507 1.9e-06 57.4 87 31.0
Prupe.4G207600 Prunus persica HOM05D000040 ORTHO05D002507 1.9e-06 57.4 85 35.3
Prupe.8G253700 Prunus persica HOM05D000040 ORTHO05D002507 1.9e-06 57.4 91 34.1
PGSC0003DMG400045513 Solanum tuberosum HOM05D000040 ORTHO05D000267 1.9e-06 57.4 83 33.7
unitig_578.g16278 Utricularia gibba HOM05D000040 ORTHO05D000759 1.9e-06 57.4 88 38.6
Atru.chr7.415 Acer truncatum HOM05D000040 ORTHO05D004411 2.5e-06 57.0 89 36.0
Actinidia25716 Actinidia chinensis HOM05D000040 ORTHO05D000267 2.5e-06 57.0 83 33.7
Aqoxy5G04215 Aquilegia oxysepala HOM05D000040 ORTHO05D010772 2.5e-06 57.0 94 29.8
DCAR_021956 Daucus carota HOM05D000040 ORTHO05D000267 2.5e-06 57.0 85 31.8
PSO478G1984 Papaver somniferum HOM05D000040 ORTHO05D002507 2.5e-06 57.0 87 32.2
unitig_0.g1241 Utricularia gibba HOM05D000040 ORTHO05D002000 2.5e-06 57.0 88 35.2
arahy.Tifrunner.gnm1.ann1.K5I42B Arachis hypogaea HOM05D000040 ORTHO05D002507 3.3e-06 56.6 129 30.2
AUR62012250 Chenopodium quinoa HOM05D000040 ORTHO05D000267 3.3e-06 56.6 83 38.6
Haze_04830 Corylus avellana HOM05D000040 ORTHO05D002507 3.3e-06 56.6 89 31.5
FvH4_5g18970 Fragaria vesca HOM05D000040 ORTHO05D022579 3.3e-06 56.6 62 45.2
Lalb_Chr06g0172061 Lupinus albus HOM05D000040 ORTHO05D002507 3.3e-06 56.6 89 34.8
Medtr7g114320 Medicago truncatula HOM05D000040 ORTHO05D002507 3.3e-06 56.6 91 39.6
Nn1g09234 Nelumbo nucifera HOM05D000040 ORTHO05D000267 3.3e-06 56.6 83 34.9
Potri.001G020400 Populus trichocarpa HOM05D000040 ORTHO05D002507 3.3e-06 56.6 87 35.6
Sopen08g001810 Solanum pennellii HOM05D000040 ORTHO05D000267 3.3e-06 56.6 83 32.5
arahy.Tifrunner.gnm1.ann1.67PM5X Arachis hypogaea HOM05D000040 ORTHO05D000267 4.3e-06 56.2 81 35.8
EL10Ac1g01071 Beta vulgaris HOM05D000040 ORTHO05D002000 4.3e-06 56.2 87 36.8
Gohir.D05G223200 Gossypium hirsutum HOM05D000040 ORTHO05D002000 4.3e-06 56.2 89 33.7
Gorai.009G230400 Gossypium raimondii HOM05D000040 ORTHO05D002000 4.3e-06 56.2 89 33.7
Os09g0452400 Oryza sativa ssp. japonica HOM05D000040 ORTHO05D000267 4.3e-06 56.2 90 34.4
Pp3c18_3870 Physcomitrium patens HOM05D000040 ORTHO05D000267 4.3e-06 56.2 84 32.1
PGR031G1787 Punica granatum HOM05D000040 ORTHO05D002000 4.3e-06 56.2 88 34.1
TWI63G0926 Tripterygium wilfordii HOM05D000040 ORTHO05D000267 4.3e-06 56.2 81 32.1
Cc00_g12660 Coffea canephora HOM05D000040 ORTHO05D000267 5.6e-06 55.8 82 35.4
Haze_22679 Corylus avellana HOM05D000040 ORTHO05D000267 5.6e-06 55.8 84 34.5
DCAR_006788 Daucus carota HOM05D000040 ORTHO05D000267 5.6e-06 55.8 84 29.8
MBI07_g26366_MAGBIO Magnolia biondii HOM05D000040 ORTHO05D005142 5.6e-06 55.8 87 34.5
TWI79G1070 Tripterygium wilfordii HOM05D000040 ORTHO05D000267 5.6e-06 55.8 84 31.0
Aqoxy1G03285 Aquilegia oxysepala HOM05D000040 ORTHO05D010772 7.3e-06 55.5 104 30.8
Aqoxy5G04219 Aquilegia oxysepala HOM05D000040 ORTHO05D010772 7.3e-06 55.5 104 30.8
AUR62014001 Chenopodium quinoa HOM05D000929 ORTHO05D003255 7.3e-06 55.5 76 32.9
Haze_08056 Corylus avellana HOM05D000040 ORTHO05D002507 7.3e-06 55.5 89 30.3
Glyma.13G196200 Glycine max HOM05D000040 ORTHO05D002000 7.3e-06 55.5 88 33.0
Lalb_Chr25g0284571 Lupinus albus HOM05D000040 ORTHO05D000267 7.3e-06 55.5 64 35.9
MD02G1129300 Malus domestica HOM05D000040 ORTHO05D022579 7.3e-06 55.5 87 35.6
Oeu043240.1 Olea europaea HOM05D000040 ORTHO05D000759 7.3e-06 55.5 96 35.4
VMungo1080G0547 Vigna mungo HOM05D000040 ORTHO05D000267 7.3e-06 55.5 84 35.7
Aqoxy1G03284 Aquilegia oxysepala HOM05D000040 ORTHO05D010772 9.5e-06 55.1 91 33.0
Aqoxy4G03084 Aquilegia oxysepala HOM05D000040 ORTHO05D002507 9.5e-06 55.1 81 32.1
Aqoxy5G04218 Aquilegia oxysepala HOM05D000040 ORTHO05D010772 9.5e-06 55.1 91 33.0
arahy.Tifrunner.gnm1.ann1.J1I9KX Arachis hypogaea HOM05D000040 ORTHO05D000267 9.5e-06 55.1 81 34.6
COL.COLO4_35214 Corchorus olitorius HOM05D000040 ORTHO05D002000 9.5e-06 55.1 73 35.6
Haze_08046 Corylus avellana HOM05D000040 ORTHO05D002507 9.5e-06 55.1 89 30.3
FAN05G4293 Fragaria x ananassa HOM05D000040 ORTHO05D012518 9.5e-06 55.1 93 36.6
Nn1g09228 Nelumbo nucifera HOM05D000040 ORTHO05D000267 9.5e-06 55.1 87 29.9


User provided reference genes

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