Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G3788 Fragaria x ananassa HOM05D000114 ORTHO05D209547 2.8e-39 164.9 84 100.0
FAN02G4570 Fragaria x ananassa HOM05D000114 ORTHO05D204558 1.6e-23 112.5 54 100.0
FAN05G0321 Fragaria x ananassa HOM05D000114 ORTHO05D000075 8.1e-23 110.2 54 98.1
FvH4_6g16910 Fragaria vesca HOM05D000114 ORTHO05D000075 5.2e-22 107.5 54 96.3
FAN05G1600 Fragaria x ananassa HOM05D000114 ORTHO05D000075 4.4e-21 104.4 53 92.5
RcHm_v2.0_Chr3g0470931 Rosa chinensis HOM05D000114 ORTHO05D000075 2.3e-17 92.0 50 84.0
FAN14G0078 Fragaria x ananassa HOM05D000114 ORTHO05D199221 8.6e-17 90.1 41 97.6
Prupe.1G516700 Prunus persica HOM05D000114 ORTHO05D000075 3.8e-12 74.7 47 76.6
Prupe.1G516600 Prunus persica HOM05D000114 ORTHO05D000075 1.2e-10 69.7 46 73.9
CiPaw.09G003000 Carya illinoinensis HOM05D000114 ORTHO05D000075 2.3e-09 65.5 69 52.2
MD12G1105400 Malus domestica HOM05D000114 ORTHO05D000075 3.9e-09 64.7 61 55.7
RcHm_v2.0_Chr3g0470961 Rosa chinensis HOM05D000114 ORTHO05D000075 3.9e-09 64.7 77 46.8
MD12G1106100 Malus domestica HOM05D000114 ORTHO05D000075 1.5e-08 62.8 61 52.5
MD12G1115700 Malus domestica HOM05D000114 ORTHO05D000075 1.5e-08 62.8 61 52.5
Prupe.7G125000 Prunus persica HOM05D000114 ORTHO05D000075 1.9e-08 62.4 69 50.7
Prupe.7G124900 Prunus persica HOM05D000114 ORTHO05D000075 4.3e-08 61.2 29 82.8
MD12G1105900 Malus domestica HOM05D000114 ORTHO05D000075 5.6e-08 60.8 61 50.8
ClCG04G009520 Citrullus lanatus HOM05D000114 ORTHO05D034643 9.6e-08 60.1 27 85.2
QL07p042154 Quercus lobata HOM05D000114 ORTHO05D000075 1.2e-07 59.7 27 85.2
Haze_19442 Corylus avellana HOM05D000114 ORTHO05D000075 1.6e-07 59.3 79 43.0
SHI27842 Sapria himalayana HOM05D000114 ORTHO05D000075 2.8e-07 58.5 30 76.7
MELO3C024488.2 Cucumis melo HOM05D000114 ORTHO05D000075 3.6e-07 58.2 27 81.5
CsaV3_6G040140 Cucumis sativus L. HOM05D000114 ORTHO05D034643 3.6e-07 58.2 27 81.5
TWI74G0795 Tripterygium wilfordii HOM05D000114 ORTHO05D000075 3.6e-07 58.2 64 50.0
Potri.016G097500 Populus trichocarpa HOM05D000114 ORTHO05D000075 6.2e-07 57.4 78 41.0
FAN05G4718 Fragaria x ananassa HOM05D000114 ORTHO05D200219 8.1e-07 57.0 77 44.2
Eucgr.K02434 Eucalyptus grandis HOM05D000114 ORTHO05D000075 1.1e-06 56.6 27 81.5
FvH4_6g16920 Fragaria vesca HOM05D000114 ORTHO05D000075 1.1e-06 56.6 77 44.2
FAN05G4249 Fragaria x ananassa HOM05D000114 ORTHO05D000075 1.1e-06 56.6 77 44.2
Lj1g0022049 Lotus japonicus HOM05D000114 ORTHO05D000075 1.1e-06 56.6 30 73.3
Sabra16G0100400 Salix brachista HOM05D000114 ORTHO05D000075 1.4e-06 56.2 78 39.7
Dinv35817 Davidia involucrata HOM05D000114 ORTHO05D000075 1.8e-06 55.8 58 51.7
PGR142G1481 Punica granatum HOM05D000114 ORTHO05D000075 2.4e-06 55.5 27 77.8
CANSAT80G1524 Cannabis sativa HOM05D000114 ORTHO05D000075 3.1e-06 55.1 77 42.9
COL.COLO4_26905 Corchorus olitorius HOM05D000114 ORTHO05D000075 5.2e-06 54.3 37 59.5
MD12G1105000 Malus domestica HOM05D000114 ORTHO05D000075 5.2e-06 54.3 33 72.7
Sabra16G0099300 Salix brachista HOM05D000114 ORTHO05D000075 6.9e-06 53.9 26 76.9


User provided reference genes

Program Settings