Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G3621 Fragaria x ananassa HOM05D000211 ORTHO05D012231 1.7e-70 269.2 136 100.0
FAN08G2516 Fragaria x ananassa HOM05D000211 ORTHO05D012231 3.4e-23 112.1 103 64.1
FAN23G2059 Fragaria x ananassa HOM05D000211 ORTHO05D012231 4.5e-23 111.7 117 58.1
FAN17G2806 Fragaria x ananassa HOM05D000211 ORTHO05D002517 3.8e-22 108.6 107 64.5
FAN20G1680 Fragaria x ananassa HOM05D000211 ORTHO05D012231 5.0e-22 108.2 103 63.1
FAN08G2429 Fragaria x ananassa HOM05D000211 ORTHO05D012231 6.5e-22 107.8 115 60.9
FAN25G1083 Fragaria x ananassa HOM05D000211 ORTHO05D012231 1.1e-21 107.1 122 54.9
FAN02G2695 Fragaria x ananassa HOM05D000211 ORTHO05D012231 2.5e-21 105.9 93 68.8
FAN28G0681 Fragaria x ananassa HOM05D000211 ORTHO05D012231 2.1e-20 102.8 103 61.2
FvH4_6g16240 Fragaria vesca HOM05D000211 ORTHO05D012231 2.7e-20 102.4 107 61.7
FAN22G1099 Fragaria x ananassa HOM05D000211 ORTHO05D002517 3.6e-20 102.1 108 63.0
FAN09G0687 Fragaria x ananassa HOM05D000211 ORTHO05D012231 6.1e-20 101.3 110 62.7
FAN12G3563 Fragaria x ananassa HOM05D000211 ORTHO05D002517 1.0e-19 100.5 108 63.0
FvH4_6g28141 Fragaria vesca HOM05D000211 ORTHO05D012231 1.8e-19 99.8 101 59.4
FAN10G2389 Fragaria x ananassa HOM05D000211 ORTHO05D012231 2.3e-19 99.4 72 75.0
FAN01G1900 Fragaria x ananassa HOM05D000211 ORTHO05D012231 6.7e-19 97.8 100 61.0
FAN20G2652 Fragaria x ananassa HOM05D000211 ORTHO05D012231 8.8e-19 97.4 78 67.9
FvH4_4g01820 Fragaria vesca HOM05D000211 ORTHO05D002517 1.5e-18 96.7 80 71.2
FAN12G2707 Fragaria x ananassa HOM05D000211 ORTHO05D002517 1.5e-18 96.7 80 71.2
RcHm_v2.0_Chr4g0388881 Rosa chinensis HOM05D000211 ORTHO05D002517 7.2e-13 77.8 80 61.2
Prupe.1G024200 Prunus persica HOM05D000211 ORTHO05D002517 7.4e-10 67.8 81 54.3
MD13G1202500 Malus domestica HOM05D000211 ORTHO05D002517 2.2e-09 66.2 82 54.9
MD16G1202600 Malus domestica HOM05D000211 ORTHO05D002517 3.7e-09 65.5 81 55.6
Dinv14067 Davidia involucrata HOM05D000211 ORTHO05D002517 1.4e-08 63.5 83 47.0
ClCG06G006570 Citrullus lanatus HOM05D000211 ORTHO05D002517 1.8e-08 63.2 79 53.2
Eucgr.H00506 Eucalyptus grandis HOM05D000211 ORTHO05D002517 1.8e-08 63.2 108 43.5
FAN03G1694 Fragaria x ananassa HOM05D000211 ORTHO05D012231 3.1e-08 62.4 45 80.0
PGR142G0223 Punica granatum HOM05D000211 ORTHO05D002517 3.1e-08 62.4 113 41.6
Migut.G00405 Erythranthe guttata HOM05D000211 ORTHO05D002517 4.1e-08 62.0 72 54.2
Glyma.20G211200 Glycine max HOM05D000211 ORTHO05D002517 7.0e-08 61.2 125 40.8
SGA_v2.0_scaffold79G25612 Striga asiatica HOM05D000211 ORTHO05D002517 9.1e-08 60.8 80 46.2
SGA_v2.0_scaffold14G06940 Striga asiatica HOM05D000211 ORTHO05D012231 1.2e-07 60.5 80 47.5
SGA_v2.0_scaffold308G48116 Striga asiatica HOM05D000211 ORTHO05D002517 1.2e-07 60.5 121 42.1
Manes.15G034400 Manihot esculenta HOM05D000211 ORTHO05D002517 1.5e-07 60.1 118 42.4
Nitab4.5_0002398g0070 Nicotiana tabacum HOM05D000211 ORTHO05D002517 2.0e-07 59.7 85 49.4
Sabra10G0062600 Salix brachista HOM05D000211 ORTHO05D002517 2.0e-07 59.7 124 36.3
HPP92_018607 Vanilla planifolia HOM05D000211 ORTHO05D002517 2.0e-07 59.7 129 38.8
Sabra08G0121700 Salix brachista HOM05D000211 ORTHO05D002517 2.6e-07 59.3 122 36.1
Solyc09g082970.3 Solanum lycopersicum HOM05D000211 ORTHO05D002517 2.6e-07 59.3 95 48.4
Hma1.2p1_0897F.1_g234255 Hydrangea macrophylla HOM05D000211 ORTHO05D002517 3.4e-07 58.9 83 48.2
Hma1.2p1_0897F.1_g234260 Hydrangea macrophylla HOM05D000211 ORTHO05D002517 3.4e-07 58.9 83 48.2
Actinidia05478 Actinidia chinensis HOM05D000211 ORTHO05D002517 4.5e-07 58.5 80 47.5
arahy.Tifrunner.gnm1.ann1.53XZTF Arachis hypogaea HOM05D000211 ORTHO05D002517 4.5e-07 58.5 115 40.0
arahy.Tifrunner.gnm1.ann1.5P7LAL Arachis hypogaea HOM05D000211 ORTHO05D002517 4.5e-07 58.5 115 40.0
Potri.010G080700 Populus trichocarpa HOM05D000211 ORTHO05D002517 4.5e-07 58.5 133 34.6
CSS0010452 Camellia sinensis var. sinensis HOM05D000211 ORTHO05D002517 5.9e-07 58.2 80 47.5
Sopen09g031830 Solanum pennellii HOM05D000211 ORTHO05D002517 5.9e-07 58.2 81 49.4
CiPaw.02G118500 Carya illinoinensis HOM05D000211 ORTHO05D002517 1.3e-06 57.0 99 44.4
Potri.008G159700 Populus trichocarpa HOM05D000211 ORTHO05D002517 1.3e-06 57.0 125 36.8
Ciclev10004616m.g Citrus clementina HOM05D000211 ORTHO05D002517 1.7e-06 56.6 80 46.2
CsaV3_2G013320 Cucumis sativus L. HOM05D000211 ORTHO05D002517 1.7e-06 56.6 80 48.8
Peaxi162Scf00788g00013 Petunia axillaris HOM05D000211 ORTHO05D002517 1.7e-06 56.6 85 48.2
Sed0009210 Sechium edule HOM05D000211 ORTHO05D002517 1.7e-06 56.6 96 45.8
CARHR098900 Cardamine hirsuta HOM05D000211 ORTHO05D002517 2.2e-06 56.2 142 33.8
FAN08G1996 Fragaria x ananassa HOM05D000211 ORTHO05D012231 2.2e-06 56.2 45 75.6
TWI73G1169 Tripterygium wilfordii HOM05D000211 ORTHO05D002517 2.2e-06 56.2 84 44.0
Nn1g02515 Nelumbo nucifera HOM05D000211 ORTHO05D002517 2.9e-06 55.8 68 51.5
Thecc.04G241800 Theobroma cacao HOM05D000211 ORTHO05D002517 2.9e-06 55.8 74 48.6
Cfa008411 Carpinus fangiana HOM05D000211 ORTHO05D002517 3.8e-06 55.5 75 46.7
Manes.03G171200 Manihot esculenta HOM05D000211 ORTHO05D002517 3.8e-06 55.5 129 39.5
Sed0002520 Sechium edule HOM05D000211 ORTHO05D002517 3.8e-06 55.5 69 50.7
Duzib212G0243 Durio zibethinus HOM05D000211 ORTHO05D002517 5.0e-06 55.1 125 36.0
Nitab4.5_0000941g0100 Nicotiana tabacum HOM05D000211 ORTHO05D002517 6.5e-06 54.7 99 42.4
Lj6A651G58 Lonicera japonica HOM05D000211 ORTHO05D002517 8.5e-06 54.3 90 47.8
Oeu009113.1 Olea europaea HOM05D000211 ORTHO05D002517 8.5e-06 54.3 88 43.2


User provided reference genes

Program Settings