Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G3549 Fragaria x ananassa HOM05D005439 ORTHO05D006793 1.8e-72 275.8 139 100.0
FAN14G2189 Fragaria x ananassa HOM05D005439 ORTHO05D006793 3.1e-27 125.6 64 89.1
RcHm_v2.0_Chr5g0034441 Rosa chinensis HOM05D005439 ORTHO05D006793 1.1e-13 80.5 62 61.3
RcHm_v2.0_Chr6g0279991 Rosa chinensis HOM05D005439 ORTHO05D006793 4.3e-13 78.6 62 59.7
Prupe.4G185100 Prunus persica HOM05D005439 ORTHO05D006793 2.4e-11 72.8 53 64.2
CiPaw.08G146000 Carya illinoinensis HOM05D005439 ORTHO05D006793 4.4e-10 68.6 64 46.9
MD03G1224300 Malus domestica HOM05D005439 ORTHO05D006793 5.8e-10 68.2 54 61.1
CiPaw.12G120500 Carya illinoinensis HOM05D005439 ORTHO05D006793 7.6e-10 67.8 64 46.9
Haze_09469 Corylus avellana HOM05D005439 ORTHO05D006793 1.3e-09 67.0 49 59.2
Duzib170G0676 Durio zibethinus HOM05D005439 ORTHO05D006793 1.1e-08 63.9 50 58.0
Nn1g04026 Nelumbo nucifera HOM05D005439 ORTHO05D006793 3.2e-08 62.4 66 48.5
QL08p019954 Quercus lobata HOM05D005439 ORTHO05D006793 4.2e-08 62.0 49 57.1
CANSAT80G2923 Cannabis sativa HOM05D005439 ORTHO05D006793 7.1e-08 61.2 57 52.6
Manes.15G085800 Manihot esculenta HOM05D005439 ORTHO05D006793 7.1e-08 61.2 64 50.0
Rhsim04G0164900 Rhododendron simsii HOM05D005439 ORTHO05D006793 7.1e-08 61.2 50 54.0
PSO541G3703 Papaver somniferum HOM05D005439 ORTHO05D006793 1.2e-07 60.5 55 50.9
Lalb_Chr20g0109751 Lupinus albus HOM05D005439 ORTHO05D006793 2.1e-07 59.7 63 44.4
Thecc.07G077600 Theobroma cacao HOM05D005439 ORTHO05D006793 2.1e-07 59.7 50 56.0
PSO675G4650 Papaver somniferum HOM05D005439 ORTHO05D006793 2.7e-07 59.3 55 50.9
DCAR_000742 Daucus carota HOM05D005439 ORTHO05D006793 3.5e-07 58.9 50 52.0
Dinv04318 Davidia involucrata HOM05D005439 ORTHO05D006793 3.5e-07 58.9 51 49.0
Aqoxy1G02538 Aquilegia oxysepala HOM05D005439 ORTHO05D006793 4.6e-07 58.5 47 55.3
Gohir.A11G282786 Gossypium hirsutum HOM05D005439 ORTHO05D006793 4.6e-07 58.5 50 56.0
Gorai.007G319700 Gossypium raimondii HOM05D005439 ORTHO05D006793 4.6e-07 58.5 50 56.0
Sabra11G0107800 Salix brachista HOM05D005439 ORTHO05D006793 4.6e-07 58.5 50 54.0
TAR626G0706 Trochodendron aralioides HOM05D005439 ORTHO05D006793 4.6e-07 58.5 48 52.1
Gohir.A05G386100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 7.9e-07 57.8 50 56.0
Gohir.A08G058200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 7.9e-07 57.8 50 56.0
Gohir.A08G188900 Gossypium hirsutum HOM05D005439 ORTHO05D006793 7.9e-07 57.8 50 56.0
Gohir.A11G204100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 7.9e-07 57.8 50 56.0
Gohir.D08G040300 Gossypium hirsutum HOM05D005439 ORTHO05D006793 7.9e-07 57.8 50 56.0
Gohir.D09G236700 Gossypium hirsutum HOM05D005439 ORTHO05D006793 7.9e-07 57.8 50 56.0
Gohir.D10G173200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 7.9e-07 57.8 50 56.0
Gohir.D11G168400 Gossypium hirsutum HOM05D005439 ORTHO05D006793 7.9e-07 57.8 50 56.0
Gohir.D11G296600 Gossypium hirsutum HOM05D005439 ORTHO05D006793 7.9e-07 57.8 50 56.0
Gohir.D13G039100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 7.9e-07 57.8 50 56.0
Gorai.007G117500 Gossypium raimondii HOM05D005439 ORTHO05D006793 7.9e-07 57.8 50 56.0
Potri.011G121800 Populus trichocarpa HOM05D005439 ORTHO05D006793 1.0e-06 57.4 50 54.0
TAR624G0176 Trochodendron aralioides HOM05D005439 ORTHO05D006793 1.0e-06 57.4 49 53.1
Cc04_g05330 Coffea canephora HOM05D005439 ORTHO05D006793 1.7e-06 56.6 50 52.0
Gorai.013G039600 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.7e-06 56.6 50 54.0
ATR0019G055 Amborella trichopoda HOM05D005439 ORTHO05D006793 2.3e-06 56.2 54 48.1
Actinidia01110 Actinidia chinensis HOM05D005439 ORTHO05D006793 3.0e-06 55.8 46 54.3
COL.COLO4_09427 Corchorus olitorius HOM05D005439 ORTHO05D006793 3.0e-06 55.8 66 47.0
arahy.Tifrunner.gnm1.ann1.5K0R4Y Arachis hypogaea HOM05D005439 ORTHO05D006793 3.9e-06 55.5 72 37.5
arahy.Tifrunner.gnm1.ann1.KJ06EE Arachis hypogaea HOM05D005439 ORTHO05D006793 3.9e-06 55.5 72 37.5
Gorai.012G015600 Gossypium raimondii HOM05D005439 ORTHO05D006793 3.9e-06 55.5 50 54.0
Lsat_1_v5_gn_9_97181 Lactuca sativa HOM05D005439 ORTHO05D006793 3.9e-06 55.5 50 50.0
Lsat_1_v5_gn_9_97261 Lactuca sativa HOM05D005439 ORTHO05D006793 3.9e-06 55.5 50 50.0
CSS0022813 Camellia sinensis var. sinensis HOM05D005439 ORTHO05D006793 5.1e-06 55.1 50 46.0
Phvul.005G083100 Phaseolus vulgaris HOM05D005439 ORTHO05D006793 5.1e-06 55.1 51 47.1
vmacro08610 Vaccinium macrocarpon HOM05D005439 ORTHO05D006793 5.1e-06 55.1 48 52.1
Ciclev10009838m.g Citrus clementina HOM05D005439 ORTHO05D006793 6.6e-06 54.7 50 48.0
TWI15G0142 Tripterygium wilfordii HOM05D005439 ORTHO05D006793 6.6e-06 54.7 47 53.2
Cpa.g.sc53.123 Carica papaya HOM05D005439 ORTHO05D006793 8.7e-06 54.3 50 52.0
AUR62034281 Chenopodium quinoa HOM05D005439 ORTHO05D006793 8.7e-06 54.3 70 38.6
Gorai.010G125600 Gossypium raimondii HOM05D005439 ORTHO05D006793 8.7e-06 54.3 50 54.0
Gorai.013G217100 Gossypium raimondii HOM05D005439 ORTHO05D006793 8.7e-06 54.3 50 52.0
Psat5g245080 Pisum sativum HOM05D005439 ORTHO05D006793 8.7e-06 54.3 51 43.1
GSVIVG01014379001 Vitis vinifera HOM05D005439 ORTHO05D006793 8.7e-06 54.3 48 47.9


User provided reference genes

Program Settings