Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G3522 Fragaria x ananassa HOM05D000225 ORTHO05D046587 1.1e-34 149.4 77 100.0
FAN14G3884 Fragaria x ananassa HOM05D000225 ORTHO05D009218 3.0e-32 141.4 78 96.2
FAN05G2208 Fragaria x ananassa HOM05D000225 ORTHO05D009218 3.9e-32 141.0 78 96.2
FAN02G2670 Fragaria x ananassa HOM05D000225 ORTHO05D009218 5.6e-31 137.1 78 92.3
FAN02G4480 Fragaria x ananassa HOM05D000225 ORTHO05D009218 5.6e-31 137.1 78 92.3
FvH4_6g53170 Fragaria vesca HOM05D000225 ORTHO05D009218 1.3e-30 136.0 78 96.2
RcHm_v2.0_Chr2g0175211 Rosa chinensis HOM05D000225 ORTHO05D009218 1.2e-25 119.4 76 86.8
Prupe.3G303700 Prunus persica HOM05D000225 ORTHO05D009218 1.1e-23 112.8 75 77.3
MD17G1014100 Malus domestica HOM05D000225 ORTHO05D009218 1.5e-23 112.5 76 77.6
MD09G1013400 Malus domestica HOM05D000225 ORTHO05D009218 2.8e-22 108.2 75 76.0
QL02p071813 Quercus lobata HOM05D000225 ORTHO05D009218 7.6e-20 100.1 72 76.4
Cfa007246 Carpinus fangiana HOM05D000225 ORTHO05D009218 5.0e-19 97.4 71 73.2
Haze_14854 Corylus avellana HOM05D000225 ORTHO05D009218 5.0e-19 97.4 71 71.8
Manes.17G104300 Manihot esculenta HOM05D000225 ORTHO05D009218 5.0e-19 97.4 75 66.7
CANSAT64G1663 Cannabis sativa HOM05D000225 ORTHO05D009218 1.1e-18 96.3 76 72.4
vmacro05945 Vaccinium macrocarpon HOM05D000225 ORTHO05D009218 1.1e-18 96.3 70 68.6
Thecc.04G033400 Theobroma cacao HOM05D000225 ORTHO05D009218 1.4e-18 95.9 70 71.4
Nitab4.5_0002887g0090 Nicotiana tabacum HOM05D000225 ORTHO05D009218 2.5e-18 95.1 75 65.3
Ciclev10017541m.g Citrus clementina HOM05D000225 ORTHO05D009218 3.2e-18 94.7 72 70.8
CiPaw.04G035200 Carya illinoinensis HOM05D000225 ORTHO05D009218 4.2e-18 94.4 72 70.8
Glyma.19G088300 Glycine max HOM05D000225 ORTHO05D009218 4.2e-18 94.4 69 69.6
Psat3g176480 Pisum sativum HOM05D000225 ORTHO05D009218 5.5e-18 94.0 69 65.2
CiPaw.03G053700 Carya illinoinensis HOM05D000225 ORTHO05D009218 9.3e-18 93.2 72 69.4
CAN.G473.86 Capsicum annuum HOM05D000225 ORTHO05D009218 1.2e-17 92.8 71 64.8
Oeu013946.1 Olea europaea HOM05D000225 ORTHO05D009218 1.2e-17 92.8 75 62.7
Peaxi162Scf00420g00445 Petunia axillaris HOM05D000225 ORTHO05D009218 1.2e-17 92.8 70 65.7
Solyc02g094010.2 Solanum lycopersicum HOM05D000225 ORTHO05D009218 1.2e-17 92.8 73 68.5
DCAR_011313 Daucus carota HOM05D000225 ORTHO05D009218 1.6e-17 92.4 72 65.3
PGSC0003DMG400020216 Solanum tuberosum HOM05D000225 ORTHO05D009218 1.6e-17 92.4 72 68.1
VMungo1383G0281 Vigna mungo HOM05D000225 ORTHO05D009218 1.6e-17 92.4 69 68.1
Phvul.001G095500 Phaseolus vulgaris HOM05D000225 ORTHO05D009218 2.1e-17 92.0 77 63.6
COL.COLO4_17169 Corchorus olitorius HOM05D000225 ORTHO05D009218 2.7e-17 91.7 66 69.7
Gohir.D04G077900 Gossypium hirsutum HOM05D000225 ORTHO05D009218 4.6e-17 90.9 72 65.3
Gorai.012G087700 Gossypium raimondii HOM05D000225 ORTHO05D009218 4.6e-17 90.9 72 65.3
Sopen02g038660 Solanum pennellii HOM05D000225 ORTHO05D009218 4.6e-17 90.9 73 67.1
Gohir.A10G159732 Gossypium hirsutum HOM05D000225 ORTHO05D009218 6.1e-17 90.5 71 64.8
Gohir.D10G084750 Gossypium hirsutum HOM05D000225 ORTHO05D009218 6.1e-17 90.5 71 64.8
Gorai.011G092200 Gossypium raimondii HOM05D000225 ORTHO05D009218 6.1e-17 90.5 71 64.8
Eucgr.I01659 Eucalyptus grandis HOM05D000225 ORTHO05D009218 7.9e-17 90.1 71 63.4
Hma1.2p1_1278F.1_g272440 Hydrangea macrophylla HOM05D000225 ORTHO05D009218 7.9e-17 90.1 69 68.1
Hma1.2p1_2105F.1_g314150 Hydrangea macrophylla HOM05D000225 ORTHO05D009218 7.9e-17 90.1 69 68.1
Medtr7g029650 Medicago truncatula HOM05D000225 ORTHO05D009218 7.9e-17 90.1 69 66.7
Potri.001G332800 Populus trichocarpa HOM05D000225 ORTHO05D009218 1.0e-16 89.7 72 65.3
TPR.G38356 Trifolium pratense HOM05D000225 ORTHO05D009218 1.0e-16 89.7 68 64.7
GSVIVG01001811001 Vitis vinifera HOM05D000225 ORTHO05D009218 1.8e-16 89.0 69 66.7
Atru.chr6.2533 Acer truncatum HOM05D000225 ORTHO05D009218 2.3e-16 88.6 71 64.8
TWI36G1589 Tripterygium wilfordii HOM05D000225 ORTHO05D009218 2.3e-16 88.6 72 69.4
Ca_27699_v3 Cicer arietinum L. HOM05D000225 ORTHO05D009218 3.9e-16 87.8 76 61.8
Sabra16G0213600 Salix brachista HOM05D000225 ORTHO05D009218 5.1e-16 87.4 74 62.2
MSTRG.3264 Avicennia marina HOM05D000225 ORTHO05D009218 6.7e-16 87.0 71 63.4
Gohir.A05G339400 Gossypium hirsutum HOM05D000225 ORTHO05D009218 6.7e-16 87.0 72 65.3
EL10Ac7g17744 Beta vulgaris HOM05D000225 ORTHO05D009218 1.1e-15 86.3 76 56.6
AUR62008845 Chenopodium quinoa HOM05D000225 ORTHO05D009218 1.1e-15 86.3 71 57.7
ECA238G4153 Erigeron canadensis HOM05D000225 ORTHO05D009218 1.1e-15 86.3 67 64.2
Ah.03g134990 Amaranthus hybridus HOM05D000225 ORTHO05D009218 1.9e-15 85.5 69 59.4
Lj1g0006126 Lotus japonicus HOM05D000225 ORTHO05D009218 1.9e-15 85.5 67 65.7
Rhsim10G0007600 Rhododendron simsii HOM05D000225 ORTHO05D009218 1.9e-15 85.5 70 61.4
AUR62025400 Chenopodium quinoa HOM05D000225 ORTHO05D009218 3.3e-15 84.7 76 53.9
MELO3C008203.2 Cucumis melo HOM05D000225 ORTHO05D009218 5.7e-15 84.0 73 64.4
SalBow7G1161 Salvia bowleyana HOM05D000225 ORTHO05D009218 5.7e-15 84.0 71 62.0
Lsat_1_v5_gn_2_94041 Lactuca sativa HOM05D000225 ORTHO05D009218 1.3e-14 82.8 71 59.2
arahy.Tifrunner.gnm1.ann1.13YX85 Arachis hypogaea HOM05D000225 ORTHO05D009218 2.2e-14 82.0 67 58.2
Lalb_Chr14g0363221 Lupinus albus HOM05D000225 ORTHO05D009218 2.2e-14 82.0 73 57.5
ATR0605G365 Amborella trichopoda HOM05D000225 ORTHO05D009218 2.8e-14 81.6 75 58.7
Lju114C5T6 Lonicera japonica HOM05D000225 ORTHO05D009218 3.7e-14 81.3 75 58.7
Migut.K01453 Erythranthe guttata HOM05D000225 ORTHO05D009218 8.2e-14 80.1 74 55.4
Dinv33353 Davidia involucrata HOM05D000225 ORTHO05D009218 1.4e-13 79.3 53 69.8
CsaV3_2G034210 Cucumis sativus L. HOM05D000225 ORTHO05D009218 1.8e-13 79.0 73 60.3
Lju1220C3T0 Lonicera japonica HOM05D000225 ORTHO05D046587 1.8e-13 79.0 70 60.0
ClCG11G007000 Citrullus lanatus HOM05D000225 ORTHO05D009218 2.4e-13 78.6 73 61.6
ECA246G2949 Erigeron canadensis HOM05D000225 ORTHO05D009218 2.0e-12 75.5 67 56.7
Lsat_1_v5_gn_9_1221 Lactuca sativa HOM05D000225 ORTHO05D009218 3.4e-12 74.7 73 52.1
Cpa.g.sc171.32 Carica papaya HOM05D000225 ORTHO05D009218 5.9e-12 73.9 69 55.1
HanXRQChr17g0550141 Helianthus annuus HOM05D000225 ORTHO05D009218 1.3e-11 72.8 67 58.2
Sed0022230 Sechium edule HOM05D000225 ORTHO05D009218 1.3e-11 72.8 73 58.9
SGA_v2.0_scaffold47G17567 Striga asiatica HOM05D000225 ORTHO05D009218 3.8e-11 71.2 68 55.9
MBI01_g31982_MAGBIO Magnolia biondii HOM05D000225 ORTHO05D009218 8.5e-11 70.1 69 58.0
arahy.Tifrunner.gnm1.ann1.0ZJG43 Arachis hypogaea HOM05D000225 ORTHO05D009218 1.1e-10 69.7 66 54.5
Nn4g22367 Nelumbo nucifera HOM05D000225 ORTHO05D009218 1.1e-10 69.7 50 66.0
Nn3g16506 Nelumbo nucifera HOM05D000225 ORTHO05D009218 5.5e-10 67.4 74 50.0
Rhsim08G0044000 Rhododendron simsii HOM05D000225 ORTHO05D009218 5.5e-10 67.4 67 52.2
Aqoxy5G03429 Aquilegia oxysepala HOM05D000225 ORTHO05D009218 1.2e-09 66.2 69 53.6
PSO063G3223 Papaver somniferum HOM05D000225 ORTHO05D009218 1.2e-09 66.2 69 52.2
MSTRG.24086 Avicennia marina HOM05D000225 ORTHO05D009218 1.6e-09 65.9 65 53.8
PSO782G1086 Papaver somniferum HOM05D000225 ORTHO05D009218 1.6e-09 65.9 68 51.5
BcaC05g30427 Brassica carinata HOM05D000225 ORTHO05D009218 2.1e-09 65.5 72 48.6
C09p74920 Brassica napus HOM05D000225 ORTHO05D009218 2.1e-09 65.5 72 48.6
Thhalv10020217m.g Eutrema salsugineum HOM05D000225 ORTHO05D009218 3.6e-09 64.7 81 43.2
Actinidia38215 Actinidia chinensis HOM05D000225 ORTHO05D009218 2.3e-08 62.0 41 70.7
BNapus_Darmor_BZH_scaffold_229p00100 Brassica napus HOM05D000225 ORTHO05D009218 3.0e-08 61.6 73 45.2
Sp3g00220 Schrenkiella parvula HOM05D000225 ORTHO05D009218 3.0e-08 61.6 75 48.0
BraSC76t46610Z Brassica rapa HOM05D000225 ORTHO05D009218 8.8e-08 60.1 75 45.3
CARHR075090 Cardamine hirsuta HOM05D000225 ORTHO05D009218 8.8e-08 60.1 82 42.7
Carub.0003s0022 Capsella rubella HOM05D000225 ORTHO05D009218 1.1e-07 59.7 75 42.7
THA.LOC104822415 Tarenaya hassleriana HOM05D000225 ORTHO05D009218 1.1e-07 59.7 81 42.0
AT3G01840 Arabidopsis thaliana HOM05D000225 ORTHO05D009218 4.4e-07 57.8 81 40.7
Aa31LG5G10980 Aethionema arabicum HOM05D000225 ORTHO05D009218 5.7e-07 57.4 73 46.6
Migut.F00078 Erythranthe guttata HOM05D000225 ORTHO05D009218 2.8e-06 55.1 46 50.0


User provided reference genes

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