Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 7.8e-77 290.4 150 100.0
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 2.3e-68 262.3 150 92.7
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.2e-58 229.9 152 84.2
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.7e-52 209.5 142 80.3
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 4.9e-47 191.4 111 90.1
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 2.1e-45 186.0 111 87.4
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 1.6e-34 149.8 102 72.5
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 2.1e-34 149.4 103 71.8
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 2.1e-34 149.4 104 71.2
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 2.8e-34 149.1 103 70.9
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 3.7e-34 148.7 103 73.8
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 4.8e-34 148.3 103 72.8
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 6.2e-34 147.9 102 71.6
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 8.1e-34 147.5 103 70.9
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 1.1e-33 147.1 99 76.8
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 2.4e-33 146.0 103 70.9
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 4.0e-33 145.2 103 68.0
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 4.0e-33 145.2 103 68.0
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 4.0e-33 145.2 104 68.3
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 5.3e-33 144.8 103 68.9
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 6.9e-33 144.4 101 71.3
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 9.0e-33 144.1 103 69.9
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 9.0e-33 144.1 103 69.9
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 9.0e-33 144.1 126 60.3
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 9.0e-33 144.1 104 69.2
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 9.0e-33 144.1 103 68.0
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 1.5e-32 143.3 103 69.9
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 2.0e-32 142.9 105 67.6
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 2.6e-32 142.5 101 70.3
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 2.6e-32 142.5 103 68.9
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 2.6e-32 142.5 103 69.9
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 3.4e-32 142.1 99 69.7
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 3.4e-32 142.1 104 68.3
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 3.4e-32 142.1 103 67.0
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 3.4e-32 142.1 101 69.3
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 4.5e-32 141.7 103 68.0
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 4.5e-32 141.7 103 68.0
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 1.3e-31 140.2 100 67.0
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 1.7e-31 139.8 99 70.7
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 1.7e-31 139.8 103 68.9
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 1.7e-31 139.8 99 71.7
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 2.2e-31 139.4 104 66.3
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 2.2e-31 139.4 101 66.3
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 3.8e-31 138.7 99 67.7
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 4.9e-31 138.3 100 66.0
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 4.9e-31 138.3 103 68.0
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 4.9e-31 138.3 103 68.0
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 6.4e-31 137.9 102 67.6
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 8.4e-31 137.5 101 68.3
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 8.4e-31 137.5 99 68.7
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 1.1e-30 137.1 99 70.7
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 1.4e-30 136.7 101 66.3
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 1.4e-30 136.7 99 67.7
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 1.9e-30 136.3 97 72.2
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 2.4e-30 136.0 103 65.0
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 3.2e-30 135.6 100 66.0
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 4.2e-30 135.2 101 66.3
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 4.2e-30 135.2 99 67.7
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 5.5e-30 134.8 103 63.1
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 5.5e-30 134.8 93 69.9
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 5.5e-30 134.8 103 65.0
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 9.3e-30 134.0 103 64.1
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 9.3e-30 134.0 99 66.7
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 1.2e-29 133.7 99 67.7
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 1.2e-29 133.7 99 66.7
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 2.1e-29 132.9 103 64.1
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 2.1e-29 132.9 97 70.1
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 3.5e-29 132.1 103 63.1
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 3.5e-29 132.1 103 63.1
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 6.0e-29 131.3 99 66.7
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 1.0e-28 130.6 99 65.7
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 1.0e-28 130.6 99 65.7
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 1.0e-28 130.6 95 70.5
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 1.0e-28 130.6 101 64.4
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 1.3e-28 130.2 100 65.0
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 1.3e-28 130.2 97 66.0
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 1.3e-28 130.2 97 66.0
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 1.3e-28 130.2 97 66.0
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 1.8e-28 129.8 103 62.1
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 2.3e-28 129.4 99 66.7
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 2.3e-28 129.4 102 62.7
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 6.7e-28 127.9 103 61.2
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 9.6e-27 124.0 73 78.1
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 1.1e-25 120.6 137 49.6
PGSC0003DMG400024179 Solanum tuberosum HOM05D007149 ORTHO05D008956 1.8e-25 119.8 74 74.3
Prupe.3G238900 Prunus persica HOM05D007149 ORTHO05D008956 2.4e-25 119.4 69 81.2
arahy.Tifrunner.gnm1.ann1.2T9F1Z Arachis hypogaea HOM05D007149 ORTHO05D008956 1.2e-24 117.1 74 73.0
arahy.Tifrunner.gnm1.ann1.HVR4ZG Arachis hypogaea HOM05D007149 ORTHO05D008956 1.2e-24 117.1 74 73.0
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 2.0e-24 116.3 80 71.2
Aa31LG2G17140 Aethionema arabicum HOM05D007149 ORTHO05D008956 5.8e-24 114.8 76 67.1
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 1.7e-23 113.2 74 67.6
SalBow6G3599 Salvia bowleyana HOM05D007149 ORTHO05D008956 1.7e-23 113.2 67 77.6
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 2.2e-23 112.8 79 70.9
Sopen02g014160 Solanum pennellii HOM05D007149 ORTHO05D008956 2.9e-23 112.5 69 73.9
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 1.4e-22 110.2 78 69.2
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 3.2e-22 109.0 77 72.7
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 3.2e-22 109.0 83 62.7
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 4.2e-22 108.6 161 42.2
AUR62014527 Chenopodium quinoa HOM05D007149 ORTHO05D008956 7.1e-22 107.8 69 69.6
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 3.5e-21 105.5 79 63.3
ECA246G4376 Erigeron canadensis HOM05D007149 ORTHO05D008956 3.0e-20 102.4 65 70.8
RcHm_v2.0_Chr2g0163021 Rosa chinensis HOM05D007149 ORTHO05D008956 7.4e-19 97.8 78 69.2
Carub.0055s0008 Capsella rubella HOM05D007149 ORTHO05D008956 9.7e-19 97.4 76 63.2
AagrBONN_evm.TU.Sc2ySwM_228.1220 Anthoceros agrestis HOM05D007149 ORTHO05D008956 1.6e-18 96.7 93 48.4
Pp3c20_17910 Physcomitrium patens HOM05D007149 ORTHO05D008956 5.3e-17 91.7 99 48.5
Mapoly0073s0075 Marchantia polymorpha HOM05D007149 ORTHO05D008956 1.3e-15 87.0 65 56.9
SMO356G0237 Selaginella moellendorffii HOM05D007149 ORTHO05D008956 1.3e-15 87.0 88 50.0
SGA_v2.0_scaffold33G13472 Striga asiatica HOM05D007149 ORTHO05D008956 1.8e-12 76.6 45 71.1
Nitab4.5_0002288g0070 Nicotiana tabacum HOM05D007149 ORTHO05D008956 1.5e-11 73.6 102 45.1
MCO15G246 Micromonas commoda HOM05D007149 ORTHO05D008956 1.5e-08 63.5 78 37.2
PRCOL_00003753 Prasinoderma coloniale HOM05D007149 ORTHO05D008956 1.0e-07 60.8 70 40.0


User provided reference genes

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