Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 2.3e-184 648.7 311 100.0
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 2.3e-131 472.6 291 82.1
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 6.2e-129 464.5 261 87.4
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 4.0e-128 461.8 261 87.0
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 1.0e-123 447.2 261 83.5
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 2.0e-106 389.8 260 73.1
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 4.5e-103 378.6 216 85.2
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 4.5e-103 378.6 259 72.2
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 3.2e-101 372.5 261 68.2
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 4.2e-101 372.1 263 66.9
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 4.2e-101 372.1 276 64.9
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 7.2e-101 371.3 263 66.2
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 3.6e-100 369.0 260 70.8
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 3.6e-100 369.0 264 68.2
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 1.8e-99 366.7 276 64.1
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 1.5e-98 363.6 261 69.7
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 2.0e-98 363.2 290 62.1
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 7.4e-98 361.3 277 62.5
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 2.2e-97 359.8 273 65.2
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 3.7e-97 359.0 262 64.9
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 4.8e-97 358.6 263 66.9
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 8.2e-97 357.8 263 64.6
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 1.1e-96 357.5 288 61.5
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 1.1e-96 357.5 262 66.8
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 4.1e-96 355.5 282 64.2
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 4.1e-96 355.5 279 62.7
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 1.2e-95 354.0 256 67.6
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 1.5e-95 353.6 262 65.6
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 4.5e-95 352.1 285 63.5
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 4.5e-95 352.1 278 61.5
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 1.0e-94 350.9 260 65.4
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 1.3e-94 350.5 262 64.1
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 1.3e-94 350.5 277 62.5
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 3.8e-94 349.0 259 64.9
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 5.0e-94 348.6 259 63.7
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 5.0e-94 348.6 262 63.4
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 5.0e-94 348.6 257 65.4
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 6.5e-94 348.2 290 59.7
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 8.5e-94 347.8 262 62.2
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 8.5e-94 347.8 247 66.8
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 8.5e-94 347.8 259 64.5
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 8.5e-94 347.8 263 64.3
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 1.9e-93 346.7 265 63.8
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 2.5e-93 346.3 255 65.1
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 4.2e-93 345.5 259 65.3
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 4.2e-93 345.5 260 64.6
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 9.4e-93 344.4 261 67.0
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 9.4e-93 344.4 270 61.9
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 1.2e-92 344.0 263 63.5
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 1.2e-92 344.0 286 61.2
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 1.6e-92 343.6 290 57.6
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 2.1e-92 343.2 249 65.9
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 8.0e-92 341.3 262 64.5
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 8.0e-92 341.3 263 62.0
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 1.4e-91 340.5 262 63.4
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 5.2e-91 338.6 267 61.0
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 1.5e-90 337.0 261 63.2
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 2.6e-90 336.3 260 63.5
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 3.3e-90 335.9 260 63.1
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 4.4e-90 335.5 234 67.9
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 4.4e-90 335.5 231 67.5
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 7.4e-90 334.7 270 60.7
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 7.4e-90 334.7 260 61.9
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 7.4e-90 334.7 276 59.1
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 1.3e-89 334.0 246 64.6
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 1.7e-89 333.6 223 68.6
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 2.8e-89 332.8 281 59.1
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 6.3e-89 331.6 234 67.5
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 6.3e-89 331.6 234 67.5
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 6.3e-89 331.6 234 67.5
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 6.3e-89 331.6 234 67.5
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 1.4e-88 330.5 275 59.6
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 1.4e-88 330.5 275 58.2
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 2.4e-88 329.7 231 66.2
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 3.1e-88 329.3 243 65.0
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 4.1e-88 328.9 231 66.2
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 5.3e-88 328.6 246 62.6
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 5.3e-88 328.6 277 58.5
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 5.3e-88 328.6 275 59.6
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 5.3e-88 328.6 234 66.2
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 7.0e-88 328.2 234 67.1
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 7.0e-88 328.2 275 59.3
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 7.0e-88 328.2 260 61.9
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 7.0e-88 328.2 258 62.0
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 9.1e-88 327.8 270 60.0
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 9.1e-88 327.8 241 64.3
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 2.0e-87 326.6 234 66.7
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 1.0e-86 324.3 247 61.1
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 1.0e-86 324.3 267 61.4
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 1.3e-86 323.9 239 65.7
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 3.8e-86 322.4 216 69.0
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 6.5e-86 321.6 279 56.3
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 6.5e-86 321.6 242 64.5
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 2.5e-85 319.7 232 65.9
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 2.5e-85 319.7 243 63.4
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 7.2e-85 318.2 262 60.3
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 1.6e-84 317.0 263 62.0
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 1.0e-83 314.3 300 54.0
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 3.4e-82 309.3 217 64.5
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 2.2e-81 306.6 263 57.8
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 3.7e-73 279.3 233 56.2
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 2.0e-71 273.5 248 58.1
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 2.0e-71 273.5 224 57.1
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 3.8e-70 269.2 244 53.7
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 3.0e-67 259.6 242 52.1
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 6.3e-65 251.9 247 48.6
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 5.4e-64 248.8 251 48.2
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 3.5e-63 246.1 237 51.5
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 1.3e-62 244.2 221 52.5
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 1.1e-61 241.1 216 57.4
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 2.1e-60 236.9 232 50.9
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 1.3e-57 227.6 189 61.4
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 3.7e-57 226.1 186 60.2
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 2.3e-51 206.8 231 51.1
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 1.2e-50 204.5 161 62.7
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 1.3e-49 201.1 262 45.4
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 8.3e-49 198.4 231 44.6
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 9.5e-45 184.9 171 52.6
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 6.4e-41 172.2 116 73.3
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 1.0e-38 164.9 121 62.8
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 1.2e-36 157.9 120 63.3
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 8.1e-28 128.6 70 81.4
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 5.8e-26 122.5 93 60.2
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea HOM05D006424 ORTHO05D007945 1.3e-17 94.7 55 78.2


User provided reference genes

Program Settings