Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G3343 Fragaria x ananassa HOM05D007804 ORTHO05D009828 1.2e-80 303.1 161 100.0
FAN02G3435 Fragaria x ananassa HOM05D007804 ORTHO05D009828 1.4e-76 289.7 162 96.9
FAN05G0497 Fragaria x ananassa HOM05D007804 ORTHO05D009828 1.4e-76 289.7 162 96.3
FvH4_6g49720 Fragaria vesca HOM05D007804 ORTHO05D009828 3.2e-76 288.5 162 95.7
FAN14G3729 Fragaria x ananassa HOM05D007804 ORTHO05D009828 3.2e-76 288.5 162 95.7
RcHm_v2.0_Chr2g0169751 Rosa chinensis HOM05D007804 ORTHO05D009828 7.8e-67 257.3 163 86.5
Prupe.3G275600 Prunus persica HOM05D007804 ORTHO05D009828 4.6e-27 125.2 175 49.1
QL02p079311 Quercus lobata HOM05D007804 ORTHO05D009828 4.2e-20 102.1 155 47.1
Thecc.04G069800 Theobroma cacao HOM05D007804 ORTHO05D009828 6.7e-18 94.7 124 51.6
CiPaw.03G032600 Carya illinoinensis HOM05D007804 ORTHO05D009828 3.7e-16 89.0 172 44.2
COL.COLO4_36996 Corchorus olitorius HOM05D007804 ORTHO05D009828 1.1e-15 87.4 136 48.5
Duzib147G0590 Durio zibethinus HOM05D007804 ORTHO05D009828 1.1e-15 87.4 132 45.5
Manes.17G117500 Manihot esculenta HOM05D007804 ORTHO05D009828 6.9e-15 84.7 128 48.4
Lj2g0027470 Lotus japonicus HOM05D007804 ORTHO05D009828 4.5e-14 82.0 156 41.7
Ciclev10012771m.g Citrus clementina HOM05D007804 ORTHO05D009828 5.9e-14 81.6 181 40.3
Manes.15G177500 Manihot esculenta HOM05D007804 ORTHO05D009828 2.9e-13 79.3 152 43.4
Cpa.g.sc14.66 Carica papaya HOM05D007804 ORTHO05D009828 5.0e-13 78.6 159 40.9
Manes.17G120501 Manihot esculenta HOM05D007804 ORTHO05D009828 6.5e-13 78.2 166 39.2
Cfa007487 Carpinus fangiana HOM05D007804 ORTHO05D009828 1.1e-12 77.4 176 38.6
Gohir.D09G022600 Gossypium hirsutum HOM05D007804 ORTHO05D009828 7.2e-12 74.7 156 39.7
Glyma.13G067400 Glycine max HOM05D007804 ORTHO05D009828 1.6e-11 73.6 181 34.3
Phvul.004G023300 Phaseolus vulgaris HOM05D007804 ORTHO05D009828 1.6e-11 73.6 176 38.1
Lalb_Chr21g0319161 Lupinus albus HOM05D007804 ORTHO05D009828 2.1e-11 73.2 162 37.0
Gorai.006G026600 Gossypium raimondii HOM05D007804 ORTHO05D009828 2.7e-11 72.8 161 38.5
VMungo0464G0276 Vigna mungo HOM05D007804 ORTHO05D009828 4.7e-11 72.0 178 34.8
Gohir.A09G023300 Gossypium hirsutum HOM05D007804 ORTHO05D009828 8.0e-11 71.2 159 38.4
Glyma.19G017000 Glycine max HOM05D007804 ORTHO05D009828 1.8e-10 70.1 173 37.6
Nn3g17058 Nelumbo nucifera HOM05D007804 ORTHO05D009828 1.8e-10 70.1 176 35.8
Nitab4.5_0002265g0080 Nicotiana tabacum HOM05D007804 ORTHO05D009828 3.9e-10 68.9 161 36.6
Sopen02g032190 Solanum pennellii HOM05D007804 ORTHO05D009828 5.2e-10 68.6 165 37.0
BcaC03g17515 Brassica carinata HOM05D007804 ORTHO05D009828 1.1e-09 67.4 182 37.9
C02p54770 Brassica napus HOM05D007804 ORTHO05D009828 1.1e-09 67.4 182 37.9
BolC2t11538H Brassica oleracea HOM05D007804 ORTHO05D009828 1.1e-09 67.4 182 37.9
CSS0004616 Camellia sinensis var. sinensis HOM05D007804 ORTHO05D009828 5.7e-09 65.1 169 36.7
Psat1g077320 Pisum sativum HOM05D007804 ORTHO05D009828 5.7e-09 65.1 170 34.7
Oeu027756.1 Olea europaea HOM05D007804 ORTHO05D009828 9.7e-09 64.3 130 40.0
Migut.K01348 Erythranthe guttata HOM05D007804 ORTHO05D009828 1.3e-08 63.9 145 39.3
Sed0004613 Sechium edule HOM05D007804 ORTHO05D009828 1.7e-08 63.5 166 34.9
Sed0005835 Sechium edule HOM05D007804 ORTHO05D009828 1.7e-08 63.5 166 34.9
Solyc02g087440.4 Solanum lycopersicum HOM05D007804 ORTHO05D009828 1.7e-08 63.5 171 35.1
BcaC06g30917 Brassica carinata HOM05D007804 ORTHO05D009828 2.2e-08 63.2 144 36.8
Actinidia02723 Actinidia chinensis HOM05D007804 ORTHO05D009828 2.8e-08 62.8 136 40.4
MELO3C021487.2 Cucumis melo HOM05D007804 ORTHO05D009828 2.8e-08 62.8 164 36.0
Peaxi162Scf00129g00628 Petunia axillaris HOM05D007804 ORTHO05D009828 2.8e-08 62.8 166 36.7
Nn4g22964 Nelumbo nucifera HOM05D007804 ORTHO05D009828 3.7e-08 62.4 161 37.3
Lalb_Chr02g0159931 Lupinus albus HOM05D007804 ORTHO05D009828 4.8e-08 62.0 174 37.9
Thhalv10004896m.g Eutrema salsugineum HOM05D007804 ORTHO05D009828 8.2e-08 61.2 196 35.7
TAR622G0153 Trochodendron aralioides HOM05D007804 ORTHO05D009828 1.1e-07 60.8 161 31.1
BcaB07g30130 Brassica carinata HOM05D007804 ORTHO05D009828 1.4e-07 60.5 179 36.3
Medtr6g009320 Medicago truncatula HOM05D007804 ORTHO05D009828 1.4e-07 60.5 175 33.1
Rhsim08G0063700 Rhododendron simsii HOM05D007804 ORTHO05D009828 1.4e-07 60.5 160 38.1
A06p40550 Brassica napus HOM05D007804 ORTHO05D009828 1.8e-07 60.1 186 36.0
BraA02t08592Z Brassica rapa HOM05D007804 ORTHO05D009828 1.8e-07 60.1 174 37.9
ClCG09G018550 Citrullus lanatus HOM05D007804 ORTHO05D009828 1.8e-07 60.1 166 34.3
Nitab4.5_0001239g0070 Nicotiana tabacum HOM05D007804 ORTHO05D009828 1.8e-07 60.1 165 35.2
MSTRG.23968 Avicennia marina HOM05D007804 ORTHO05D009828 2.4e-07 59.7 135 39.3
THA.LOC104805425 Tarenaya hassleriana HOM05D007804 ORTHO05D009828 2.4e-07 59.7 204 34.3
AT3G28420 Arabidopsis thaliana HOM05D007804 ORTHO05D009828 3.1e-07 59.3 187 34.8
BraA06t26974Z Brassica rapa HOM05D007804 ORTHO05D009828 3.1e-07 59.3 186 32.8
CARHR292560 Cardamine hirsuta HOM05D007804 ORTHO05D009828 3.1e-07 59.3 187 32.6
BcaC06g33740 Brassica carinata HOM05D007804 ORTHO05D009828 4.1e-07 58.9 149 37.6
A02p35930 Brassica napus HOM05D007804 ORTHO05D009828 4.1e-07 58.9 174 37.9
DCAR_011178 Daucus carota HOM05D007804 ORTHO05D009828 4.1e-07 58.9 159 39.0
Oeu017303.1 Olea europaea HOM05D007804 ORTHO05D009828 9.1e-07 57.8 130 37.7
PGSC0003DMG402001401 Solanum tuberosum HOM05D007804 ORTHO05D009828 9.1e-07 57.8 166 32.5
SGA_v2.0_scaffold135G34801 Striga asiatica HOM05D007804 ORTHO05D009828 9.1e-07 57.8 123 38.2
TPR.G32605 Trifolium pratense HOM05D007804 ORTHO05D009828 1.2e-06 57.4 172 34.3
C07p37470 Brassica napus HOM05D000068 ORTHO05D009828 1.6e-06 57.0 180 35.6
BolC7t44259H Brassica oleracea HOM05D000068 ORTHO05D009828 1.6e-06 57.0 180 35.6
CsaV3_5G037680 Cucumis sativus L. HOM05D007804 ORTHO05D009828 4.5e-06 55.5 174 30.5


User provided reference genes

Program Settings