Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G3071 Fragaria x ananassa HOM05D019505 ORTHO05D035309 1.4e-208 729.9 566 100.0
FvH4_6g04421 Fragaria vesca HOM05D019505 ORTHO05D035309 2.3e-81 307.4 419 87.1
FvH4_6g04562 Fragaria vesca HOM05D019505 ORTHO05D035309 2.0e-61 241.1 197 85.3
RcHm_v2.0_Chr3g0453051 Rosa chinensis HOM05D000439 ORTHO05D002302 3.6e-58 230.3 628 55.6
FAN14G1918 Fragaria x ananassa HOM05D012507 ORTHO05D011638 6.2e-42 176.4 143 67.1
FvH4_6g04560 Fragaria vesca HOM05D014759 ORTHO05D011638 4.3e-35 153.7 100 79.0
FvH4_6g04430 Fragaria vesca HOM05D014759 ORTHO05D011638 1.2e-34 152.1 99 78.8
FvH4_6g04561 Fragaria vesca HOM05D019505 ORTHO05D198194 1.9e-30 138.3 78 94.9
FAN02G3337 Fragaria x ananassa HOM05D014759 ORTHO05D011638 3.5e-21 107.5 65 81.5
FvH4_6g04630 Fragaria vesca HOM05D014759 ORTHO05D011638 1.1e-19 102.4 65 76.9
FAN06G0028 Fragaria x ananassa HOM05D019505 ORTHO05D002302 1.5e-19 102.1 596 25.8
FvH4_6g04511 Fragaria vesca HOM05D014759 ORTHO05D011638 2.5e-19 101.3 65 78.5
FAN02G2397 Fragaria x ananassa HOM05D014759 ORTHO05D011638 3.6e-18 97.4 71 69.0
RcHm_v2.0_Chr3g0453101 Rosa chinensis HOM05D014759 ORTHO05D011638 9.0e-17 92.8 65 70.8
RcHm_v2.0_Chr3g0453041 Rosa chinensis HOM05D000439 ORTHO05D002302 4.5e-16 90.5 230 38.3
FAN06G4462 Fragaria x ananassa HOM05D000439 ORTHO05D002302 1.1e-14 85.9 600 24.5
RcHm_v2.0_Chr3g0453121 Rosa chinensis HOM05D000439 ORTHO05D011638 1.6e-13 82.0 139 38.1
FvH4_7g18700 Fragaria vesca HOM05D019505 ORTHO05D002302 6.0e-13 80.1 362 27.9
FAN10G0860 Fragaria x ananassa HOM05D000439 ORTHO05D002302 7.9e-13 79.7 320 30.9
FvH4_6g04591 Fragaria vesca HOM05D014759 ORTHO05D011638 3.9e-12 77.4 65 66.2
FAN02G2309 Fragaria x ananassa HOM05D000439 ORTHO05D011638 5.6e-11 73.6 175 33.1
FvH4_6g04640 Fragaria vesca HOM05D000439 ORTHO05D035280 2.1e-10 71.6 64 57.8
FAN05G1969 Fragaria x ananassa HOM05D000439 ORTHO05D011638 6.2e-10 70.1 64 56.2
FAN05G5064 Fragaria x ananassa HOM05D000439 ORTHO05D011638 8.1e-10 69.7 88 45.5
FvH4_6g04400 Fragaria vesca HOM05D000439 ORTHO05D011638 1.4e-09 68.9 101 43.6
FAN05G1628 Fragaria x ananassa HOM05D000439 ORTHO05D002302 4.0e-09 67.4 103 42.7
FAN05G4994 Fragaria x ananassa HOM05D000439 ORTHO05D002302 4.0e-09 67.4 103 42.7
MD03G1060500 Malus domestica HOM05D000439 ORTHO05D002302 5.3e-09 67.0 72 48.6
FvH4_6g04420 Fragaria vesca HOM05D000439 ORTHO05D002302 9.0e-09 66.2 282 26.6
FAN14G1718 Fragaria x ananassa HOM05D000439 ORTHO05D011638 9.0e-09 66.2 101 42.6
FAN14G3490 Fragaria x ananassa HOM05D000439 ORTHO05D002302 9.0e-09 66.2 282 26.6
FvH4_6g04550 Fragaria vesca HOM05D000439 ORTHO05D002302 1.5e-08 65.5 65 50.8
FAN09G1898 Fragaria x ananassa HOM05D000439 ORTHO05D011638 1.5e-08 65.5 103 41.7
Prupe.6G334600 Prunus persica HOM05D000439 ORTHO05D002302 1.5e-08 65.5 65 53.8
FvH4_6g04380 Fragaria vesca HOM05D000439 ORTHO05D002302 3.4e-08 64.3 65 52.3
FAN14G5795 Fragaria x ananassa HOM05D000439 ORTHO05D002302 5.8e-08 63.5 65 52.3
Prupe.6G334400 Prunus persica HOM05D000439 ORTHO05D002302 5.8e-08 63.5 65 52.3
RcHm_v2.0_Chr3g0453091 Rosa chinensis HOM05D000439 ORTHO05D002302 5.8e-08 63.5 69 52.2
RcHm_v2.0_Chr3g0453021 Rosa chinensis HOM05D000439 ORTHO05D011638 9.9e-08 62.8 74 45.9
FAN14G4154 Fragaria x ananassa HOM05D000527 ORTHO05D000559 1.3e-07 62.4 70 47.1
MD12G1228900 Malus domestica HOM05D000439 ORTHO05D002302 1.3e-07 62.4 66 54.5
Prupe.6G334700 Prunus persica HOM05D000439 ORTHO05D002302 1.3e-07 62.4 65 53.8
RcHm_v2.0_Chr7g0237441 Rosa chinensis HOM05D000439 ORTHO05D002302 1.3e-07 62.4 144 37.5
FvH4_6g04431 Fragaria vesca HOM05D000439 ORTHO05D002302 1.7e-07 62.0 65 49.2
FAN02G4355 Fragaria x ananassa HOM05D012507 ORTHO05D011638 2.9e-07 61.2 65 50.8
Prupe.6G334200 Prunus persica HOM05D000439 ORTHO05D002302 3.8e-07 60.8 65 50.8
FAN09G1505 Fragaria x ananassa HOM05D012507 ORTHO05D011638 6.4e-07 60.1 226 27.4
FAN09G0983 Fragaria x ananassa HOM05D000439 ORTHO05D002302 1.1e-06 59.3 625 36.0
MD12G1229200 Malus domestica HOM05D000439 ORTHO05D002302 1.1e-06 59.3 65 46.2
RcHm_v2.0_Chr2g0124181 Rosa chinensis HOM05D000439 ORTHO05D002302 1.1e-06 59.3 65 47.7
RcHm_v2.0_Chr3g0453081 Rosa chinensis HOM05D000439 ORTHO05D002302 2.4e-06 58.2 65 49.2
Prupe.1G243600 Prunus persica HOM05D000439 ORTHO05D002302 4.2e-06 57.4 73 45.2
FAN09G3761 Fragaria x ananassa HOM05D012507 ORTHO05D011638 5.5e-06 57.0 202 27.7
MD12G1229900 Malus domestica HOM05D000439 ORTHO05D002302 5.5e-06 57.0 65 46.2
MD04G1214700 Malus domestica HOM05D000439 ORTHO05D002302 7.1e-06 56.6 65 47.7
MD04G1214500 Malus domestica HOM05D000439 ORTHO05D002302 9.3e-06 56.2 65 49.2


User provided reference genes

Program Settings