Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G2993 Fragaria x ananassa HOM05D006332 ORTHO05D210550 1.1e-87 326.6 164 100.0
FAN09G0423 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.9e-20 103.2 55 90.9
FvH4_3g04870 Fragaria vesca HOM05D006332 ORTHO05D008421 7.1e-15 84.7 49 89.8
FAN16G1437 Fragaria x ananassa HOM05D006332 ORTHO05D008421 1.6e-14 83.6 53 83.0
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 3.5e-14 82.4 49 87.8
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 1.0e-13 80.9 48 87.5
RcHm_v2.0_Chr5g0008031 Rosa chinensis HOM05D006332 ORTHO05D008421 8.7e-13 77.8 50 78.0
Actinidia01892 Actinidia chinensis HOM05D006332 ORTHO05D008421 2.5e-12 76.3 81 48.1
CiPaw.09G057500 Carya illinoinensis HOM05D006332 ORTHO05D008421 8.1e-11 71.2 68 54.4
MD05G1316100 Malus domestica HOM05D006332 ORTHO05D008421 2.4e-10 69.7 59 61.0
MD10G1296600 Malus domestica HOM05D006332 ORTHO05D008421 4.0e-10 68.9 59 61.0
Haze_06500 Corylus avellana HOM05D006332 ORTHO05D008421 1.5e-09 67.0 68 51.5
Prupe.4G044000 Prunus persica HOM05D006332 ORTHO05D008421 2.6e-09 66.2 55 61.8
TWI63G1670 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 5.8e-09 65.1 69 47.8
Duzib160G0593 Durio zibethinus HOM05D006332 ORTHO05D008421 2.9e-08 62.8 68 51.5
Sabra04G0025000 Salix brachista HOM05D006332 ORTHO05D008421 2.9e-08 62.8 66 51.5
Duzib235G1125 Durio zibethinus HOM05D006332 ORTHO05D008421 3.8e-08 62.4 68 48.5
FAN26G3262 Fragaria x ananassa HOM05D020887 ORTHO05D021039 3.8e-08 62.4 40 75.0
Potri.004G040500 Populus trichocarpa HOM05D006332 ORTHO05D008421 3.8e-08 62.4 66 51.5
GSVIVG01002030001 Vitis vinifera HOM05D006332 ORTHO05D008421 3.8e-08 62.4 68 51.5
Lj1C1207T6 Lonicera japonica HOM05D006332 ORTHO05D008421 4.9e-08 62.0 66 51.5
Hund21245 Selenicereus undatus HOM05D006332 ORTHO05D008421 6.4e-08 61.6 66 53.0
TWI38G1702 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 8.4e-08 61.2 51 54.9
Manes.16G025600 Manihot esculenta HOM05D006332 ORTHO05D008421 1.9e-07 60.1 48 58.3
Gohir.A06G126100 Gossypium hirsutum HOM05D006332 ORTHO05D008421 2.4e-07 59.7 68 50.0
PGR004G2698 Punica granatum HOM05D006332 ORTHO05D008421 2.4e-07 59.7 74 50.0
Cc02_g13080 Coffea canephora HOM05D006332 ORTHO05D008421 3.2e-07 59.3 72 54.2
Gohir.D06G130900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 3.2e-07 59.3 68 50.0
Gorai.010G152800 Gossypium raimondii HOM05D006332 ORTHO05D008421 3.2e-07 59.3 68 50.0
Sed0003237 Sechium edule HOM05D006332 ORTHO05D008421 3.2e-07 59.3 50 58.0
CANSAT35G2021 Cannabis sativa HOM05D006332 ORTHO05D008421 4.2e-07 58.9 53 58.5
Solyc10g008990.4 Solanum lycopersicum HOM05D006332 ORTHO05D008421 5.4e-07 58.5 69 47.8
Thecc.06G190700 Theobroma cacao HOM05D006332 ORTHO05D008421 5.4e-07 58.5 68 50.0
Cpa.g.sc27.66 Carica papaya HOM05D006332 ORTHO05D008421 7.1e-07 58.2 66 54.5
Gohir.D10G024900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 7.1e-07 58.2 68 47.1
Gohir.A10G024200 Gossypium hirsutum HOM05D006332 ORTHO05D008421 9.3e-07 57.8 68 47.1
Gohir.A10G024325 Gossypium hirsutum HOM05D006332 ORTHO05D008421 9.3e-07 57.8 68 47.1
Gorai.011G026200 Gossypium raimondii HOM05D006332 ORTHO05D008421 9.3e-07 57.8 68 47.1
QL05p039635 Quercus lobata HOM05D006332 ORTHO05D008421 9.3e-07 57.8 68 47.1
CSS0022240 Camellia sinensis var. sinensis HOM05D006332 ORTHO05D008421 1.2e-06 57.4 68 48.5
Dinv07538 Davidia involucrata HOM05D006332 ORTHO05D008421 1.2e-06 57.4 68 48.5
Nitab4.5_0003942g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 1.2e-06 57.4 73 47.9
Atru.chr10.1934 Acer truncatum HOM05D006332 ORTHO05D008421 1.6e-06 57.0 74 43.2
MELO3C002589.2 Cucumis melo HOM05D006332 ORTHO05D008421 1.6e-06 57.0 50 58.0
Ciclev10015324m.g Citrus clementina HOM05D006332 ORTHO05D008421 2.1e-06 56.6 68 45.6
CsaV3_1G012160 Cucumis sativus L. HOM05D006332 ORTHO05D008421 2.1e-06 56.6 50 60.0
ClCG03G005920 Citrullus lanatus HOM05D006332 ORTHO05D008421 3.5e-06 55.8 50 56.0
Peaxi162Scf00530g00823 Petunia axillaris HOM05D006332 ORTHO05D008421 3.5e-06 55.8 68 50.0
PGSC0003DMG400022831 Solanum tuberosum HOM05D006332 ORTHO05D008421 3.5e-06 55.8 72 47.2
COL.COLO4_31500 Corchorus olitorius HOM05D006332 ORTHO05D008421 6.0e-06 55.1 68 45.6
Nitab4.5_0009738g0030 Nicotiana tabacum HOM05D006332 ORTHO05D008421 6.0e-06 55.1 62 48.4


User provided reference genes

Program Settings