Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G2983 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.6e-154 547.7 257 100.0
FvH4_6g01541 Fragaria vesca HOM05D001729 ORTHO05D001155 2.2e-135 485.7 251 92.0
FAN14G1187 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.1e-134 481.5 251 91.6
FAN14G2874 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.1e-134 481.5 251 91.6
FAN02G4556 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.8e-81 306.6 182 84.6
FAN09G2508 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.6e-59 231.9 242 53.3
FAN02G0583 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.1e-57 227.6 242 52.1
FAN05G3901 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.0e-57 224.6 242 52.1
FAN14G0866 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.2e-47 193.4 258 40.7
FAN02G0048 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.3e-46 188.0 254 40.9
FAN14G3807 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.3e-44 183.3 249 45.4
FAN05G5688 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.0e-44 183.0 195 50.8
FAN14G5781 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.1e-44 182.2 216 44.9
FAN02G2194 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.3e-43 179.1 249 44.6
FvH4_6g02041 Fragaria vesca HOM05D001729 ORTHO05D001155 1.1e-41 174.5 235 42.6
MD05G1244200 Malus domestica HOM05D001729 ORTHO05D001155 3.2e-30 136.3 241 39.0
FvH4_6g40892 Fragaria vesca HOM05D001729 ORTHO05D001155 1.2e-29 134.4 250 36.4
FvH4_6g40891 Fragaria vesca HOM05D001729 ORTHO05D001155 2.1e-29 133.7 223 39.0
RcHm_v2.0_Chr3g0449911 Rosa chinensis HOM05D001729 ORTHO05D001155 2.1e-29 133.7 237 37.1
FAN20G1095 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.3e-28 130.2 200 41.0
FAN24G2446 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.3e-28 130.2 264 35.6
FAN05G5187 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.3e-27 126.3 185 43.8
FAN05G2640 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.8e-26 122.5 173 43.9
Prupe.5G070600 Prunus persica HOM05D001729 ORTHO05D001155 2.4e-25 120.2 221 38.5
FAN27G3392 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.6e-24 116.7 225 37.3
RcHm_v2.0_Chr5g0018111 Rosa chinensis HOM05D001729 ORTHO05D001155 1.3e-23 114.4 239 32.6
MD14G1026900 Malus domestica HOM05D001729 ORTHO05D001155 1.7e-23 114.0 230 36.5
Prupe.5G068800 Prunus persica HOM05D001729 ORTHO05D001155 1.7e-23 114.0 219 37.0
Prupe.6G075400 Prunus persica HOM05D001729 ORTHO05D001155 1.7e-23 114.0 234 35.9
Prupe.4G053600 Prunus persica HOM05D001729 ORTHO05D001155 9.4e-22 108.2 262 32.4
FvH4_6g02171 Fragaria vesca HOM05D001729 ORTHO05D001155 3.6e-21 106.3 235 35.3
FAN06G3932 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.1e-21 105.5 181 38.1
Prupe.8G110700 Prunus persica HOM05D001729 ORTHO05D001155 1.4e-20 104.4 203 36.0
FvH4_7g12841 Fragaria vesca HOM05D001729 ORTHO05D001155 1.8e-20 104.0 181 38.1
FAN01G0742 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.5e-19 100.9 181 37.6
FAN06G0177 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.3e-19 99.8 184 38.0
Prupe.6G075500 Prunus persica HOM05D001729 ORTHO05D001155 1.3e-18 97.8 221 35.7
FAN19G1216 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.7e-18 97.4 218 33.5
MD05G1324200 Malus domestica HOM05D001729 ORTHO05D001155 2.2e-18 97.1 178 37.6
RcHm_v2.0_Chr3g0450211 Rosa chinensis HOM05D001729 ORTHO05D001155 2.2e-18 97.1 222 32.0
MD03G1256400 Malus domestica HOM05D001729 ORTHO05D001155 3.7e-18 96.3 181 37.6
FAN02G3094 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.1e-17 94.7 212 34.4
MD15G1018100 Malus domestica HOM05D001729 ORTHO05D001155 3.1e-17 93.2 173 38.2
FvH4_2g24261 Fragaria vesca HOM05D001729 ORTHO05D001155 9.1e-17 91.7 197 32.0
FvH4_2g30622 Fragaria vesca HOM05D001729 ORTHO05D001155 1.2e-16 91.3 240 31.7
FAN07G1354 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.2e-16 91.3 237 31.6
FAN24G2684 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.2e-16 91.3 240 31.7
RcHm_v2.0_Chr2g0151111 Rosa chinensis HOM05D001729 ORTHO05D001155 1.2e-16 91.3 235 30.6
FvH4_3g43730 Fragaria vesca HOM05D001729 ORTHO05D001155 2.0e-16 90.5 171 32.7
Prupe.3G265100 Prunus persica HOM05D001729 ORTHO05D001155 2.0e-16 90.5 161 37.3
Prupe.1G510700 Prunus persica HOM05D001729 ORTHO05D001155 2.6e-16 90.1 273 31.5
RcHm_v2.0_Chr5g0081211 Rosa chinensis HOM05D001729 ORTHO05D001155 3.4e-16 89.7 166 35.5
RcHm_v2.0_Chr2g0123691 Rosa chinensis HOM05D001729 ORTHO05D001155 4.5e-16 89.4 191 33.0
RcHm_v2.0_Chr6g0275871 Rosa chinensis HOM05D001729 ORTHO05D001155 4.5e-16 89.4 182 35.7
RcHm_v2.0_Chr6g0291931 Rosa chinensis HOM05D001729 ORTHO05D001155 4.5e-16 89.4 249 31.3
FAN05G1447 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.9e-16 89.0 230 29.6
FAN07G0163 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.7e-16 88.6 237 31.2
FAN19G1733 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.7e-16 88.6 219 32.0
FvH4_6g45890 Fragaria vesca HOM05D001729 ORTHO05D001155 1.0e-15 88.2 166 37.3
FAN05G2911 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.3e-15 87.8 167 37.7
FAN11G1727 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.7e-15 87.4 194 33.5
FvH4_3g44510 Fragaria vesca HOM05D001729 ORTHO05D001155 2.2e-15 87.0 203 33.0
FAN16G2506 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.2e-15 87.0 203 33.0
FAN05G0208 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.9e-15 86.7 197 32.5
FAN12G2308 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.9e-15 86.7 237 31.2
FvH4_4g16921 Fragaria vesca HOM05D001729 ORTHO05D001155 3.8e-15 86.3 237 31.2
FAN12G2239 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.8e-15 86.3 237 31.2
RcHm_v2.0_Chr2g0163051 Rosa chinensis HOM05D001729 ORTHO05D001155 3.8e-15 86.3 204 33.3
FvH4_1g02011 Fragaria vesca HOM05D001729 ORTHO05D001155 5.0e-15 85.9 188 32.4
FvH4_6g46240 Fragaria vesca HOM05D001729 ORTHO05D001155 5.0e-15 85.9 180 36.7
FAN02G3887 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.0e-15 85.9 179 35.8
FAN02G3994 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.0e-15 85.9 143 35.0
FAN19G0745 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.0e-15 85.9 188 32.4
Prupe.3G059500 Prunus persica HOM05D001729 ORTHO05D001155 5.0e-15 85.9 232 31.0
FvH4_3g43682 Fragaria vesca HOM05D001729 ORTHO05D001155 6.5e-15 85.5 124 35.5
FvH4_4g18120 Fragaria vesca HOM05D001729 ORTHO05D001155 6.5e-15 85.5 236 30.5
FvH4_6g46242 Fragaria vesca HOM05D001729 ORTHO05D001155 6.5e-15 85.5 211 32.7
FAN11G0139 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.5e-15 85.5 220 32.3
Prupe.1G509300 Prunus persica HOM05D001729 ORTHO05D001155 6.5e-15 85.5 170 38.2
Atru.chr9.1050 Acer truncatum HOM05D006807 ORTHO05D008528 8.5e-15 85.1 210 28.1
RcHm_v2.0_Chr2g0089331 Rosa chinensis HOM05D001729 ORTHO05D001155 8.5e-15 85.1 225 29.8
FAN14G3193 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.1e-14 84.7 166 36.7
FvH4_6g39371 Fragaria vesca HOM05D001729 ORTHO05D001155 1.4e-14 84.3 164 36.0
FvH4_6g46280 Fragaria vesca HOM05D001729 ORTHO05D001155 2.5e-14 83.6 252 30.6
FAN15G0828 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.5e-14 83.6 125 40.0
FAN18G1542 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.5e-14 83.6 202 31.7
FAN18G4057 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.5e-14 83.6 202 31.7
FAN27G2714 Fragaria x ananassa HOM05D001115 ORTHO05D001023 2.5e-14 83.6 203 34.0
FAN15G1054 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.2e-14 83.2 201 33.8
FAN09G2757 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.2e-14 82.8 151 36.4
FAN14G1727 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.2e-14 82.8 151 36.4
AUR62006003 Chenopodium quinoa HOM05D001729 ORTHO05D001155 7.2e-14 82.0 219 30.1
FvH4_6g03181 Fragaria vesca HOM05D001729 ORTHO05D001155 7.2e-14 82.0 168 33.9
FAN09G4011 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.2e-14 82.0 168 33.9
RcHm_v2.0_Chr6g0276071 Rosa chinensis HOM05D001729 ORTHO05D001155 7.2e-14 82.0 145 42.1
FAN16G0249 Fragaria x ananassa HOM05D001729 ORTHO05D001155 9.4e-14 81.6 218 31.2
FAN08G1373 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.2e-13 81.3 202 31.2
QL08p043319 Quercus lobata HOM05D001729 ORTHO05D001155 1.2e-13 81.3 214 31.8
RcHm_v2.0_Chr5g0081171 Rosa chinensis HOM05D001729 ORTHO05D001155 1.2e-13 81.3 149 37.6
RcHm_v2.0_Chr5g0021011 Rosa chinensis HOM05D001729 ORTHO05D001155 1.6e-13 80.9 161 33.5
FvH4_3g44471 Fragaria vesca HOM05D001729 ORTHO05D001155 2.7e-13 80.1 218 30.7
FAN05G4264 Fragaria x ananassa HOM05D001526 ORTHO05D001417 2.7e-13 80.1 218 29.8
FAN14G0370 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.6e-13 79.7 207 30.9
FvH4_6g03221 Fragaria vesca HOM05D001729 ORTHO05D001155 4.7e-13 79.3 179 32.4
FAN09G4239 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.7e-13 79.3 179 32.4
FvH4_3g35490 Fragaria vesca HOM05D001729 ORTHO05D001155 6.1e-13 79.0 189 32.8
FAN05G5452 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.1e-13 79.0 203 31.5
FAN12G2569 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.1e-13 79.0 153 34.0
RcHm_v2.0_Chr7g0221261 Rosa chinensis HOM05D001729 ORTHO05D001155 6.1e-13 79.0 181 33.7
AUR62035623 Chenopodium quinoa HOM05D001729 ORTHO05D001155 7.9e-13 78.6 218 28.4
MD02G1008900 Malus domestica HOM05D001729 ORTHO05D001155 7.9e-13 78.6 156 35.3
RcHm_v2.0_Chr2g0164721 Rosa chinensis HOM05D001729 ORTHO05D001155 7.9e-13 78.6 220 30.5
FAN14G3676 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.0e-12 78.2 172 34.3
MD02G1008700 Malus domestica HOM05D001729 ORTHO05D001155 1.0e-12 78.2 156 34.6
FvH4_2g19920 Fragaria vesca HOM05D001729 ORTHO05D001155 1.4e-12 77.8 144 38.2
FAN24G2147 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.4e-12 77.8 144 38.2
FvH4_6g37041 Fragaria vesca HOM05D001729 ORTHO05D001155 1.8e-12 77.4 176 29.0
FAN01G0708 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.8e-12 77.4 183 35.5
FAN12G0631 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.8e-12 77.4 211 32.2
RcHm_v2.0_Chr6g0292271 Rosa chinensis HOM05D001729 ORTHO05D001155 1.8e-12 77.4 202 30.2
FvH4_6g46241 Fragaria vesca HOM05D001729 ORTHO05D001155 2.3e-12 77.0 208 30.3
FvH4_4g17121 Fragaria vesca HOM05D001729 ORTHO05D001155 3.0e-12 76.6 153 33.3
QL01p006048 Quercus lobata HOM05D001729 ORTHO05D001155 3.0e-12 76.6 216 27.3
FvH4_4g31310 Fragaria vesca HOM05D001729 ORTHO05D001155 3.9e-12 76.3 157 34.4
FAN05G4861 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.9e-12 76.3 145 37.9
Prupe.1G512600 Prunus persica HOM05D001729 ORTHO05D001155 3.9e-12 76.3 211 31.3
FvH4_3g30171 Fragaria vesca HOM05D001729 ORTHO05D001155 5.2e-12 75.9 185 30.8
FAN08G2539 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.7e-12 75.5 177 34.5
FvH4_6g45251 Fragaria vesca HOM05D001729 ORTHO05D001155 8.8e-12 75.1 175 33.1
FvH4_6g03380 Fragaria vesca HOM05D001729 ORTHO05D001155 1.1e-11 74.7 158 32.9
RcHm_v2.0_Chr6g0285591 Rosa chinensis HOM05D001729 ORTHO05D001155 1.1e-11 74.7 164 36.0
FAN05G0656 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.0e-11 73.9 185 31.4
FAN09G3613 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.3e-11 73.2 198 31.3
FvH4_6g31981 Fragaria vesca HOM05D001729 ORTHO05D001155 4.4e-11 72.8 144 34.7
FAN14G3624 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.4e-11 72.8 158 32.9
MD10G1000600 Malus domestica HOM05D001729 ORTHO05D001155 4.4e-11 72.8 206 30.6
QL08p043324 Quercus lobata HOM05D001729 ORTHO05D001155 4.4e-11 72.8 179 31.8
RcHm_v2.0_Chr1g0380481 Rosa chinensis HOM05D001729 ORTHO05D001155 5.7e-11 72.4 181 30.9
FAN03G3155 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.3e-10 71.2 183 32.8
FAN11G3238 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.3e-10 71.2 170 31.8
TPR.G12691 Trifolium pratense HOM05D001729 ORTHO05D011785 2.8e-10 70.1 188 30.3
CANSAT80G0415 Cannabis sativa HOM05D001729 ORTHO05D001155 3.7e-10 69.7 220 30.5
FAN11G2672 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.7e-10 69.7 185 32.4
Medtr4g124160 Medicago truncatula HOM05D001729 ORTHO05D001155 4.8e-10 69.3 179 29.6
FvH4_3g44582 Fragaria vesca HOM05D001729 ORTHO05D001155 6.3e-10 68.9 202 29.2
FvH4_4g35052 Fragaria vesca HOM05D001729 ORTHO05D001155 6.3e-10 68.9 150 32.0
FAN03G2781 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.4e-09 67.8 175 30.9
FAN03G2850 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.4e-09 67.8 175 30.9
FAN02G2750 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.8e-09 67.4 158 31.0
FAN15G2506 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.8e-09 67.4 184 28.8
Lsat_1_v5_gn_5_30901 Lactuca sativa HOM05D001729 ORTHO05D001155 1.8e-09 67.4 163 29.4
MD09G1201600 Malus domestica HOM05D001729 ORTHO05D001155 1.8e-09 67.4 163 34.4
Psat4g020960 Pisum sativum HOM05D001729 ORTHO05D001155 1.8e-09 67.4 186 28.0
AUR62035624 Chenopodium quinoa HOM05D001729 ORTHO05D001155 3.1e-09 66.6 237 26.6
Lsat_1_v5_gn_5_31100 Lactuca sativa HOM05D001729 ORTHO05D001155 4.1e-09 66.2 188 25.5
TAR625G1137 Trochodendron aralioides HOM05D001729 ORTHO05D001155 4.1e-09 66.2 243 26.7
FAN16G1493 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.3e-09 65.9 204 29.4
FAN16G0128 Fragaria x ananassa HOM05D001729 ORTHO05D001155 7.0e-09 65.5 138 31.9
RcHm_v2.0_Chr3g0457271 Rosa chinensis HOM05D001729 ORTHO05D001155 9.1e-09 65.1 136 33.8
FAN14G1791 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.2e-08 64.7 136 34.6
QL05p052800 Quercus lobata HOM05D001729 ORTHO05D001155 1.2e-08 64.7 193 25.4
RcHm_v2.0_Chr6g0292091 Rosa chinensis HOM05D001729 ORTHO05D001155 1.2e-08 64.7 200 29.0
FAN09G1640 Fragaria x ananassa HOM05D017208 ORTHO05D025447 1.6e-08 64.3 64 45.3
FAN21G1715 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.0e-08 63.9 182 29.1
MD14G1187900 Malus domestica HOM05D001729 ORTHO05D001155 2.0e-08 63.9 169 31.4
Thecc.03G222100 Theobroma cacao HOM05D001729 ORTHO05D001155 2.6e-08 63.5 182 30.2
FvH4_2g24270 Fragaria vesca HOM05D001729 ORTHO05D001155 4.5e-08 62.8 157 31.2
Ah.07g204710 Amaranthus hybridus HOM05D001729 ORTHO05D001155 1.0e-07 61.6 218 27.1
PSO782G2276 Papaver somniferum HOM05D008326 ORTHO05D001155 2.2e-07 60.5 181 29.8
Prupe.3G059600 Prunus persica HOM05D001729 ORTHO05D001155 2.9e-07 60.1 169 36.1
TAR376G1077 Trochodendron aralioides HOM05D002420 ORTHO05D002422 2.9e-07 60.1 147 31.3
FAN16G0429 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.0e-07 59.3 144 31.9
FAN24G2236 Fragaria x ananassa HOM05D001729 ORTHO05D001155 6.5e-07 58.9 156 28.8
RcHm_v2.0_Chr2g0163011 Rosa chinensis HOM05D001729 ORTHO05D001155 8.5e-07 58.5 150 30.7
Potri.011G004800 Populus trichocarpa HOM05D001729 ORTHO05D001155 1.1e-06 58.2 199 28.1
Prupe.4G034700 Prunus persica HOM05D001729 ORTHO05D001155 1.1e-06 58.2 107 36.4
Lsat_1_v5_gn_6_92061 Lactuca sativa HOM05D001729 ORTHO05D001155 1.5e-06 57.8 198 27.3
PSO541G1556 Papaver somniferum HOM05D008326 ORTHO05D001155 1.5e-06 57.8 158 29.1
FAN25G0589 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.9e-06 57.4 129 31.8
FvH4_6g45291 Fragaria vesca HOM05D001729 ORTHO05D001155 2.5e-06 57.0 150 30.7
FAN14G0421 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.5e-06 57.0 150 30.7
Lj4g0002979 Lotus japonicus HOM05D001729 ORTHO05D001155 3.2e-06 56.6 162 28.4
Sc19g0000590 Simmondsia chinensis HOM05D001729 ORTHO05D001155 3.2e-06 56.6 176 25.0
Rhsim08G0219900 Rhododendron simsii HOM05D001729 ORTHO05D001155 4.2e-06 56.2 174 28.2
Sabra11G0003700 Salix brachista HOM05D001729 ORTHO05D001155 7.2e-06 55.5 180 28.9
FAN08G0338 Fragaria x ananassa HOM05D001729 ORTHO05D000713 9.4e-06 55.1 88 35.2


User provided reference genes

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