Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G2851 Fragaria x ananassa HOM05D007341 ORTHO05D009075 1.4e-87 326.2 165 100.0
FvH4_6g36350 Fragaria vesca HOM05D007341 ORTHO05D009075 2.9e-85 318.5 165 97.6
FAN02G2832 Fragaria x ananassa HOM05D007341 ORTHO05D009075 2.5e-84 315.5 165 97.0
RcHm_v2.0_Chr2g0148351 Rosa chinensis HOM05D007341 ORTHO05D009075 5.2e-74 281.2 165 85.5
FAN14G2925 Fragaria x ananassa HOM05D007341 ORTHO05D009075 1.8e-71 272.7 165 87.9
FAN14G4935 Fragaria x ananassa HOM05D007341 ORTHO05D009075 1.8e-71 272.7 165 87.9
Prupe.3G028000 Prunus persica HOM05D007341 ORTHO05D009075 2.2e-56 222.6 190 65.8
MD09G1169800 Malus domestica HOM05D007341 ORTHO05D009075 2.0e-54 216.1 176 66.5
QL05p085130 Quercus lobata HOM05D007341 ORTHO05D009075 4.6e-54 214.9 149 72.5
Cfa002160 Carpinus fangiana HOM05D007341 ORTHO05D009075 2.5e-52 209.1 173 64.7
CiPaw.01G092200 Carya illinoinensis HOM05D007341 ORTHO05D009075 9.5e-52 207.2 147 71.4
Gohir.A05G116700 Gossypium hirsutum HOM05D007341 ORTHO05D009075 1.1e-50 203.8 169 63.9
Haze_16246 Corylus avellana HOM05D007341 ORTHO05D009075 1.8e-50 203.0 171 63.7
Duzib235G0177 Durio zibethinus HOM05D007341 ORTHO05D009075 4.0e-50 201.8 168 62.5
Gohir.D05G117600 Gossypium hirsutum HOM05D007341 ORTHO05D009075 4.0e-50 201.8 169 62.7
Gorai.009G121500 Gossypium raimondii HOM05D007341 ORTHO05D009075 8.9e-50 200.7 166 63.3
Sabra07G0002700 Salix brachista HOM05D007341 ORTHO05D009075 1.1e-47 193.7 179 61.5
Potri.007G003600 Populus trichocarpa HOM05D007341 ORTHO05D009075 2.1e-46 189.5 180 60.0
TWI12G0959 Tripterygium wilfordii HOM05D007341 ORTHO05D009075 2.7e-46 189.1 117 78.6
MELO3C019561.2 Cucumis melo HOM05D007341 ORTHO05D009075 7.8e-46 187.6 101 83.2
Glyma.15G000400 Glycine max HOM05D007341 ORTHO05D009075 1.3e-45 186.8 125 73.6
Phvul.005G082000 Phaseolus vulgaris HOM05D007341 ORTHO05D009075 1.3e-45 186.8 148 65.5
Thecc.06G049400 Theobroma cacao HOM05D007341 ORTHO05D009075 1.3e-45 186.8 154 63.0
Dinv20313 Davidia involucrata HOM05D007341 ORTHO05D009075 2.3e-45 186.0 167 61.7
CANSAT01G1666 Cannabis sativa HOM05D007341 ORTHO05D009075 3.9e-45 185.3 101 81.2
Sed0003722 Sechium edule HOM05D007341 ORTHO05D009075 3.9e-45 185.3 98 83.7
TAR636G1203 Trochodendron aralioides HOM05D007341 ORTHO05D009075 1.1e-44 183.7 137 69.3
CsaV3_3G018050 Cucumis sativus L. HOM05D007341 ORTHO05D009075 2.5e-44 182.6 94 87.2
GSVIVG01029444001 Vitis vinifera HOM05D007341 ORTHO05D009075 4.3e-44 181.8 98 83.7
HanXRQChr03g0072101 Helianthus annuus HOM05D007341 ORTHO05D009075 1.2e-43 180.3 100 82.0
Hma1.2p1_0422F.1_g150100 Hydrangea macrophylla HOM05D007341 ORTHO05D009075 2.8e-43 179.1 166 56.6
Ciclev10029418m.g Citrus clementina HOM05D007341 ORTHO05D009075 3.6e-43 178.7 98 80.6
Lsat_1_v5_gn_9_114620 Lactuca sativa HOM05D007341 ORTHO05D009075 8.1e-43 177.6 133 68.4
ECA240G2002 Erigeron canadensis HOM05D007341 ORTHO05D009075 1.1e-42 177.2 125 71.2
Eucgr.F04060 Eucalyptus grandis HOM05D007341 ORTHO05D009075 6.8e-42 174.5 125 67.2
Sopen10g035850 Solanum pennellii HOM05D007341 ORTHO05D009075 6.8e-42 174.5 133 65.4
CSS0015626 Camellia sinensis var. sinensis HOM05D007341 ORTHO05D009075 8.9e-42 174.1 129 69.0
PGSC0003DMG400019203 Solanum tuberosum HOM05D007341 ORTHO05D009075 8.9e-42 174.1 140 62.9
Solyc10g086470.2 Solanum lycopersicum HOM05D007341 ORTHO05D009075 1.2e-41 173.7 133 65.4
DCAR_027600 Daucus carota HOM05D007341 ORTHO05D009075 2.6e-41 172.6 147 58.5
Medtr6g004140 Medicago truncatula HOM05D007341 ORTHO05D009075 2.6e-41 172.6 139 64.0
Cc06_g16890 Coffea canephora HOM05D007341 ORTHO05D009075 3.4e-41 172.2 133 62.4
Nitab4.5_0000349g0220 Nicotiana tabacum HOM05D007341 ORTHO05D009075 5.8e-41 171.4 146 61.6
Aqoxy7G02561 Aquilegia oxysepala HOM05D007341 ORTHO05D009075 8.4e-40 167.5 135 65.9
PGR102G3137 Punica granatum HOM05D007341 ORTHO05D009075 1.9e-39 166.4 125 63.2
Lalb_Chr24g0392671 Lupinus albus HOM05D007341 ORTHO05D009075 1.6e-38 163.3 123 66.7
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 3.0e-37 159.1 138 62.3
THA.LOC104808109 Tarenaya hassleriana HOM05D007341 ORTHO05D009075 3.9e-37 158.7 157 54.1
VMungo1080G1509 Vigna mungo HOM05D007341 ORTHO05D009075 5.1e-37 158.3 114 70.2
Migut.K00075 Erythranthe guttata HOM05D007341 ORTHO05D009075 1.1e-36 157.1 170 51.8
Actinidia38822 Actinidia chinensis HOM05D007341 ORTHO05D009075 1.9e-36 156.4 179 50.8
A07p27380 Brassica napus HOM05D007341 ORTHO05D009075 1.9e-36 156.4 161 54.0
CDE05G1356 Ceratophyllum demersum HOM05D007341 ORTHO05D009075 2.5e-36 156.0 113 64.6
BraA07t30379Z Brassica rapa HOM05D007341 ORTHO05D009075 3.3e-36 155.6 161 54.0
Sp5g34040 Schrenkiella parvula HOM05D007341 ORTHO05D009075 4.3e-36 155.2 159 53.5
Carub.0002s2586 Capsella rubella HOM05D007341 ORTHO05D009075 7.3e-36 154.5 128 61.7
BcaB02g07190 Brassica carinata HOM05D007341 ORTHO05D009075 9.6e-36 154.1 167 52.7
AT1G78995 Arabidopsis thaliana HOM05D007341 ORTHO05D009075 1.2e-35 153.7 151 54.3
MSTRG.26115 Avicennia marina HOM05D007341 ORTHO05D009075 6.2e-35 151.4 147 58.5
BcaC08g45393 Brassica carinata HOM05D007341 ORTHO05D009075 8.1e-35 151.0 162 51.9
C06p30240 Brassica napus HOM05D007341 ORTHO05D009075 8.1e-35 151.0 162 51.9
BolC6t38187H Brassica oleracea HOM05D007341 ORTHO05D009075 8.1e-35 151.0 162 51.9
CARHR072660 Cardamine hirsuta HOM05D007341 ORTHO05D009075 1.1e-34 150.6 163 52.1
unitig_748.g7237 Utricularia gibba HOM05D007341 ORTHO05D009075 1.4e-34 150.2 138 58.0
Thhalv10019269m.g Eutrema salsugineum HOM05D007341 ORTHO05D009075 1.8e-34 149.8 166 48.8
ClCG05G010440 Citrullus lanatus HOM05D007341 ORTHO05D009075 2.4e-34 149.4 89 77.5
HPP92_026441 Vanilla planifolia HOM05D007341 ORTHO05D009075 8.9e-34 147.5 138 58.7
AUR62025687 Chenopodium quinoa HOM05D007341 ORTHO05D009075 1.5e-33 146.7 128 60.2
AUR62001305 Chenopodium quinoa HOM05D007341 ORTHO05D009075 2.0e-33 146.4 128 59.4
Pp3c15_22740 Physcomitrium patens HOM05D007341 ORTHO05D009075 2.0e-33 146.4 113 64.6
ATR0626G096 Amborella trichopoda HOM05D007341 ORTHO05D009075 2.6e-33 146.0 127 61.4
Mapoly0061s0126 Marchantia polymorpha HOM05D007341 ORTHO05D009075 7.6e-33 144.4 95 70.5
AL2G39450 Arabidopsis lyrata HOM05D007341 ORTHO05D009075 1.3e-32 143.7 133 58.6
EL10Ac7g18105 Beta vulgaris HOM05D007341 ORTHO05D009075 1.7e-32 143.3 129 58.9
SGA_v2.0_scaffold94G28462 Striga asiatica HOM05D007341 ORTHO05D009075 1.7e-32 143.3 169 50.3
Cpa.g.sc4293.1 Carica papaya HOM05D007341 ORTHO05D009075 4.9e-32 141.7 120 60.0
Nn8g41280 Nelumbo nucifera HOM05D007341 ORTHO05D009075 8.4e-32 141.0 133 59.4
Hund18551 Selenicereus undatus HOM05D007341 ORTHO05D009075 3.2e-31 139.0 150 50.7
Zm00001eb227230 Zea mays HOM05D007341 ORTHO05D009075 3.2e-31 139.0 116 57.8
PSO063G2737 Papaver somniferum HOM05D007341 ORTHO05D009075 1.2e-30 137.1 156 52.6
PSO170G4447 Papaver somniferum HOM05D007341 ORTHO05D009075 1.6e-30 136.7 143 54.5
Nitab4.5_0001911g0010 Nicotiana tabacum HOM05D007341 ORTHO05D009075 4.6e-30 135.2 132 58.3
SMO232G0085 Selaginella moellendorffii HOM05D007341 ORTHO05D009075 1.9e-28 129.8 114 57.0
DCAR_011722 Daucus carota HOM05D007341 ORTHO05D009075 2.8e-27 125.9 156 44.2
Sc16g0003760 Simmondsia chinensis HOM05D007341 ORTHO05D009075 6.2e-27 124.8 85 70.6
Os06g0704200 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 3.4e-25 119.0 120 55.8
Sabra14G0002900 Salix brachista HOM05D007341 ORTHO05D009075 5.8e-25 118.2 89 66.3
Manes.06G177800 Manihot esculenta HOM05D007341 ORTHO05D009075 4.2e-23 112.1 122 51.6
Peaxi162Scf00330g00029 Petunia axillaris HOM05D007341 ORTHO05D009075 6.0e-22 108.2 109 56.0
Cre01.g000800 Chlamydomonas reinhardtii HOM05D007341 ORTHO05D009075 2.3e-21 106.3 121 47.1
Psat6g000680 Pisum sativum HOM05D007341 ORTHO05D009075 8.7e-21 104.4 139 55.4
C02p36120 Brassica napus HOM05D007341 ORTHO05D009075 1.5e-20 103.6 66 69.7
Rhsim08G0252300 Rhododendron simsii HOM05D000912 ORTHO05D009075 3.6e-19 99.0 110 52.7
Oeu004021.1 Olea europaea HOM05D007341 ORTHO05D009075 1.2e-17 94.0 108 53.7
vmacro18722 Vaccinium macrocarpon HOM05D007341 ORTHO05D009075 1.2e-17 94.0 176 38.6
Lj9A544T49 Lonicera japonica HOM05D007341 ORTHO05D009075 1.5e-17 93.6 67 71.6
Os02g0138100 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 2.6e-17 92.8 75 60.0
Aa31LG4G1990 Aethionema arabicum HOM05D007341 ORTHO05D009075 3.4e-17 92.4 130 43.8
MCO04G269 Micromonas commoda HOM05D007341 ORTHO05D009075 4.5e-17 92.0 117 40.2
SalBow1G8719 Salvia bowleyana HOM05D007341 ORTHO05D009075 1.4e-15 87.0 159 38.4
SalBow1G7986 Salvia bowleyana HOM05D007341 ORTHO05D009075 2.4e-15 86.3 136 41.2
MBI13_g34919_MAGBIO Magnolia biondii HOM05D007341 ORTHO05D009075 1.2e-14 84.0 80 61.2
AagrBONN_evm.TU.Sc2ySwM_368.1307 Anthoceros agrestis HOM05D007341 ORTHO05D009075 3.5e-14 82.4 61 67.2
PRCOL_00000561 Prasinoderma coloniale HOM05D007341 ORTHO05D009075 1.9e-12 76.6 91 41.8
Ah.08g218010 Amaranthus hybridus HOM05D007341 ORTHO05D009075 5.6e-12 75.1 130 40.0
Zm00001eb231900 Zea mays HOM05D007341 ORTHO05D009075 2.0e-09 66.6 77 45.5


User provided reference genes

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