Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.5e-122 443.0 246 100.0
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 2.7e-119 432.2 245 98.8
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 3.5e-119 431.8 246 98.4
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.3e-118 429.9 246 98.0
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 3.9e-118 428.3 248 97.2
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 9.0e-107 390.6 250 92.8
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 2.2e-97 359.4 248 83.9
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 5.1e-94 348.2 254 78.7
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 2.9e-89 332.4 253 77.1
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 6.3e-84 314.7 248 72.2
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 1.4e-83 313.5 248 71.8
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 4.5e-82 308.5 247 70.0
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 5.9e-82 308.1 252 73.4
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 2.2e-81 306.2 249 72.3
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 2.9e-81 305.8 247 70.9
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 8.5e-81 304.3 246 65.4
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 8.5e-81 304.3 247 68.8
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.1e-80 303.9 241 70.5
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 1.9e-80 303.1 247 72.9
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 2.5e-80 302.8 251 69.7
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 7.2e-80 301.2 247 72.1
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 7.2e-80 301.2 249 69.9
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 2.7e-79 299.3 243 73.7
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 3.6e-79 298.9 249 66.3
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 3.6e-79 298.9 248 71.0
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 1.4e-78 297.0 250 71.6
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 2.3e-78 296.2 251 68.9
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 2.6e-77 292.7 248 69.0
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 7.5e-77 291.2 248 64.5
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 1.3e-76 290.4 249 69.5
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 1.7e-76 290.0 248 67.7
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 2.2e-76 289.7 248 65.3
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 2.2e-76 289.7 250 61.2
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 4.8e-76 288.5 248 67.3
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 4.8e-76 288.5 250 63.6
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 6.3e-76 288.1 248 69.0
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 1.4e-75 287.0 246 67.5
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 1.4e-75 287.0 249 68.3
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 1.4e-75 287.0 248 61.3
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 1.4e-75 287.0 249 67.9
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 1.8e-75 286.6 248 66.9
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 2.4e-75 286.2 248 67.3
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 2.4e-75 286.2 253 66.0
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 3.1e-75 285.8 248 66.9
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 3.1e-75 285.8 249 67.1
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 3.1e-75 285.8 249 67.1
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 3.1e-75 285.8 251 65.3
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 5.4e-75 285.0 249 67.1
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 9.1e-75 284.3 250 63.2
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 1.2e-74 283.9 248 66.5
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 1.6e-74 283.5 242 65.3
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 1.6e-74 283.5 249 67.1
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 2.7e-74 282.7 243 64.6
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 2.7e-74 282.7 248 68.5
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 3.5e-74 282.3 249 65.5
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 2.9e-73 279.3 252 68.7
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 2.9e-73 279.3 253 67.2
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 3.8e-73 278.9 242 64.5
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 8.5e-73 277.7 249 65.9
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 1.9e-72 276.6 249 65.5
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 9.4e-72 274.2 241 70.5
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 6.1e-71 271.6 155 93.5
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.4e-70 270.4 246 64.6
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 1.8e-70 270.0 278 59.4
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 2.3e-70 269.6 248 62.5
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 3.0e-70 269.2 249 63.5
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 3.7e-68 262.3 248 63.3
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 1.4e-67 260.4 254 57.9
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 1.8e-67 260.0 249 65.1
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 3.5e-66 255.8 251 62.5
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 1.3e-65 253.8 265 58.1
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 1.7e-65 253.4 258 60.5
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 2.3e-65 253.1 221 62.9
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 8.6e-65 251.1 248 66.1
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 5.6e-64 248.4 245 60.4
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 1.2e-63 247.3 248 57.3
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 6.1e-63 245.0 244 58.6
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 1.8e-62 243.4 219 64.8
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 5.7e-61 238.4 244 61.9
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 5.7e-61 238.4 246 59.3
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 2.2e-60 236.5 245 58.8
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 3.5e-58 229.2 205 67.3
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 1.0e-57 227.6 245 56.7
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 1.7e-57 226.9 187 67.4
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 8.6e-57 224.6 221 63.8
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 1.9e-56 223.4 229 61.1
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 1.9e-56 223.4 249 56.2
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 4.3e-56 222.2 241 57.3
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 9.5e-56 221.1 246 56.9
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 1.2e-55 220.7 187 61.5
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 2.8e-55 219.5 248 51.2
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 4.7e-55 218.8 249 56.2
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 6.2e-55 218.4 248 54.4
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 6.8e-54 214.9 243 56.4
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 1.2e-53 214.2 249 51.8
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 2.6e-53 213.0 180 62.8
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 7.5e-53 211.5 205 61.5
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 3.2e-51 206.1 245 54.3
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 2.1e-47 193.4 253 45.5
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.1e-46 189.5 152 70.4
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 6.4e-44 181.8 247 43.7
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 3.9e-41 172.6 250 48.4
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 9.5e-40 167.9 150 59.3
CSS0018235 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.6e-39 166.0 160 63.8
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 1.2e-37 161.0 258 39.5
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 4.1e-35 152.5 142 58.5
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 3.3e-32 142.9 270 41.1
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 2.9e-28 129.8 260 37.7
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.4e-27 127.5 118 69.5
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.4e-27 127.5 118 69.5
arahy.Tifrunner.gnm1.ann1.ZK4YW6 Arachis hypogaea HOM05D006823 ORTHO05D008608 1.2e-26 124.4 220 41.4
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 1.4e-22 110.9 158 43.7
SMO145G0064 Selaginella moellendorffii HOM05D006823 ORTHO05D008608 4.0e-22 109.4 233 38.2
arahy.Tifrunner.gnm1.ann1.V1GDUY Arachis hypogaea HOM05D006823 ORTHO05D008608 3.8e-20 102.8 91 58.2
Zm00001eb092000 Zea mays HOM05D006823 ORTHO05D008608 2.7e-18 96.7 183 39.3
CBR_g4860 Chara braunii HOM05D006823 ORTHO05D008608 9.6e-16 88.2 331 27.8
Cpa.g.sc85.85 Carica papaya HOM05D006823 ORTHO05D008608 1.3e-12 77.8 45 75.6
Zm00001eb385990 Zea mays HOM05D006823 ORTHO05D008608 5.1e-09 65.9 131 39.7
Zm00001eb116260 Zea mays HOM05D006823 ORTHO05D008608 2.5e-08 63.5 111 40.5
Peaxi162Scf00258g00118 Petunia axillaris HOM05D006823 ORTHO05D008608 3.3e-08 63.2 57 56.1
Oeu006328.1 Olea europaea HOM05D006753 ORTHO05D008521 5.3e-06 55.8 86 39.5


User provided reference genes

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