Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G2830 Fragaria x ananassa HOM05D012632 ORTHO05D016311 3.4e-197 691.4 341 100.0
FAN14G0957 Fragaria x ananassa HOM05D012632 ORTHO05D016311 1.2e-178 629.8 339 93.5
FvH4_6g36030 Fragaria vesca HOM05D012632 ORTHO05D016311 2.1e-146 522.7 339 77.6
FAN02G2363 Fragaria x ananassa HOM05D012632 ORTHO05D016311 7.8e-141 504.2 338 75.4
RcHm_v2.0_Chr2g0143241 Rosa chinensis HOM05D012632 ORTHO05D016311 6.4e-127 458.0 344 69.8
RcHm_v2.0_Chr2g0143301 Rosa chinensis HOM05D012632 ORTHO05D016311 5.4e-126 454.9 344 69.8
FAN14G1479 Fragaria x ananassa HOM05D012632 ORTHO05D016311 2.1e-98 363.2 234 75.2
RcHm_v2.0_Chr6g0253161 Rosa chinensis HOM05D012632 ORTHO05D016311 1.5e-80 303.9 231 64.9
FAN09G3107 Fragaria x ananassa HOM05D012632 ORTHO05D016311 1.8e-68 263.8 257 56.8
FAN09G2881 Fragaria x ananassa HOM05D012632 ORTHO05D016311 9.2e-25 118.6 76 85.5
MD17G1149700 Malus domestica HOM05D012632 ORTHO05D016311 2.8e-21 107.1 185 41.1
RcHm_v2.0_Chr2g0143271 Rosa chinensis HOM05D019908 ORTHO05D013079 7.3e-14 82.4 183 39.3
RcHm_v2.0_Chr6g0253151 Rosa chinensis HOM05D013833 ORTHO05D013079 9.5e-14 82.0 112 46.4
MBI13_g00895_MAGBIO Magnolia biondii HOM05D000519 ORTHO05D001210 8.1e-13 79.0 213 30.5
FvH4_3g43010 Fragaria vesca HOM05D013833 ORTHO05D013079 1.8e-12 77.8 125 42.4
Prupe.6G034400 Prunus persica HOM05D042542 ORTHO05D013079 4.0e-12 76.6 168 35.7
FAN17G1753 Fragaria x ananassa HOM05D013833 ORTHO05D013079 1.2e-11 75.1 98 46.9
FAN16G3708 Fragaria x ananassa HOM05D013833 ORTHO05D013079 2.0e-11 74.3 128 42.2
RcHm_v2.0_Chr7g0231321 Rosa chinensis HOM05D012632 ORTHO05D348521 1.7e-10 71.2 118 40.7
FvH4_3g43011 Fragaria vesca HOM05D013833 ORTHO05D013079 2.2e-10 70.9 122 41.0
FAN09G0122 Fragaria x ananassa HOM05D019908 ORTHO05D013079 1.1e-09 68.6 91 50.5
FvH4_6g36040 Fragaria vesca HOM05D019908 ORTHO05D013079 1.9e-09 67.8 159 36.5
FAN21G3813 Fragaria x ananassa HOM05D013833 ORTHO05D013079 4.1e-09 66.6 120 40.0
HanXRQChr03g0091631 Helianthus annuus HOM05D000519 ORTHO05D001210 6.0e-08 62.8 192 27.6
Solyc06g073587.1 Solanum lycopersicum HOM05D000519 ORTHO05D019510 7.8e-08 62.4 194 30.4
Solyc06g150133.1 Solanum lycopersicum HOM05D000519 ORTHO05D019510 7.8e-08 62.4 194 30.4
FAN11G1906 Fragaria x ananassa HOM05D013833 ORTHO05D013079 1.3e-07 61.6 92 44.6
RcHm_v2.0_Chr7g0231351 Rosa chinensis HOM05D012632 ORTHO05D343975 1.7e-07 61.2 178 33.1
Aqoxy5G01464 Aquilegia oxysepala HOM05D012438 ORTHO05D012575 2.3e-07 60.8 121 41.3
MD03G1041000 Malus domestica HOM05D052476 ORTHO05D248543 3.9e-07 60.1 136 33.8
VMungo0647G2419 Vigna mungo HOM05D000519 ORTHO05D001210 3.9e-07 60.1 192 27.6
PGSC0003DMG400005921 Solanum tuberosum HOM05D000519 ORTHO05D019510 6.6e-07 59.3 191 26.7
Sopen06g029960 Solanum pennellii HOM05D000519 ORTHO05D019510 8.6e-07 58.9 194 28.9
FAN09G3544 Fragaria x ananassa HOM05D022329 ORTHO05D012575 1.1e-06 58.5 58 60.3
PGSC0003DMG400005950 Solanum tuberosum HOM05D000519 ORTHO05D019510 1.9e-06 57.8 192 26.0
Prupe.6G034500 Prunus persica HOM05D057509 ORTHO05D012575 2.5e-06 57.4 189 33.9
MD15G1382700 Malus domestica HOM05D012438 ORTHO05D012575 3.3e-06 57.0 84 44.0
Eucgr.A02187 Eucalyptus grandis HOM05D000519 ORTHO05D001210 4.3e-06 56.6 66 51.5
Eucgr.A02189 Eucalyptus grandis HOM05D000519 ORTHO05D001210 4.3e-06 56.6 66 51.5
Glyma.14G038300 Glycine max HOM05D000519 ORTHO05D001210 4.3e-06 56.6 188 28.7
Ciclev10012693m.g Citrus clementina HOM05D000519 ORTHO05D001210 5.6e-06 56.2 93 37.6
FAN02G3219 Fragaria x ananassa HOM05D022329 ORTHO05D012575 7.3e-06 55.8 105 38.1
MBI19_g39142_MAGBIO Magnolia biondii HOM05D000519 ORTHO05D001210 7.3e-06 55.8 69 49.3
MD17G1149600 Malus domestica HOM05D012438 ORTHO05D012575 7.3e-06 55.8 85 43.5
HPP92_012548 Vanilla planifolia HOM05D000519 ORTHO05D001210 7.3e-06 55.8 60 51.7
BraA01t04133Z Brassica rapa HOM05D000519 ORTHO05D001210 9.6e-06 55.5 84 42.9
Ciclev10002346m.g Citrus clementina HOM05D000519 ORTHO05D001210 9.6e-06 55.5 58 50.0
THA.LOC104826741 Tarenaya hassleriana HOM05D000519 ORTHO05D001210 9.6e-06 55.5 118 36.4


User provided reference genes

Program Settings