Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G2827 Fragaria x ananassa HOM05D006849 ORTHO05D003348 6.4e-85 317.4 163 100.0
FAN26G0218 Fragaria x ananassa HOM05D006849 ORTHO05D003348 2.9e-61 238.8 132 90.2
FAN07G1000 Fragaria x ananassa HOM05D006849 ORTHO05D003348 9.1e-55 217.2 123 88.6
FAN23G1018 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.0e-53 213.8 163 71.2
FAN08G0186 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.6e-51 205.3 115 88.7
FAN16G1061 Fragaria x ananassa HOM05D006849 ORTHO05D003348 6.1e-51 204.5 159 69.8
FAN08G3609 Fragaria x ananassa HOM05D006849 ORTHO05D003348 9.1e-47 190.7 121 79.3
FAN26G2619 Fragaria x ananassa HOM05D006849 ORTHO05D003348 6.3e-40 167.9 90 87.8
FAN26G2996 Fragaria x ananassa HOM05D006849 ORTHO05D003348 7.2e-28 127.9 90 73.3
FAN21G0813 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.8e-23 113.2 73 79.5
RcHm_v2.0_Chr3g0491361 Rosa chinensis HOM05D006849 ORTHO05D003348 1.0e-21 107.5 122 47.5
RcHm_v2.0_Chr1g0371171 Rosa chinensis HOM05D006849 ORTHO05D003348 1.5e-20 103.6 124 47.6
RcHm_v2.0_Chr7g0206181 Rosa chinensis HOM05D006849 ORTHO05D003348 1.5e-20 103.6 122 46.7
FAN06G2901 Fragaria x ananassa HOM05D047128 ORTHO05D003348 4.3e-20 102.1 66 74.2
RcHm_v2.0_Chr5g0010461 Rosa chinensis HOM05D006849 ORTHO05D003348 1.0e-18 97.4 123 40.7
RcHm_v2.0_Chr2g0149141 Rosa chinensis HOM05D006849 ORTHO05D003348 3.1e-18 95.9 121 40.5
FAN14G2538 Fragaria x ananassa HOM05D006849 ORTHO05D003348 4.0e-18 95.5 122 42.6
FvH4_5g21501 Fragaria vesca HOM05D006849 ORTHO05D003348 1.2e-17 94.0 131 40.5
RcHm_v2.0_Chr1g0379271 Rosa chinensis HOM05D006849 ORTHO05D003348 1.9e-15 86.7 123 39.0
RcHm_v2.0_Chr2g0133251 Rosa chinensis HOM05D006849 ORTHO05D003348 2.7e-14 82.8 120 38.3
RcHm_v2.0_Chr1g0378751 Rosa chinensis HOM05D006849 ORTHO05D003348 3.3e-12 75.9 106 40.6
FAN02G2385 Fragaria x ananassa HOM05D006849 ORTHO05D003348 4.3e-12 75.5 123 38.2
FvH4_2g22171 Fragaria vesca HOM05D006849 ORTHO05D003348 5.6e-12 75.1 131 38.9
FAN06G0436 Fragaria x ananassa HOM05D006849 ORTHO05D003348 5.6e-12 75.1 125 37.6
FAN21G3588 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.2e-11 73.9 155 35.5
FvH4_3g07130 Fragaria vesca HOM05D006849 ORTHO05D003348 1.6e-11 73.6 121 39.7
FvH4_3g24350 Fragaria vesca HOM05D006849 ORTHO05D003348 2.8e-11 72.8 115 40.9
FvH4_4g22470 Fragaria vesca HOM05D006849 ORTHO05D003348 2.8e-11 72.8 76 43.4
FAN24G2869 Fragaria x ananassa HOM05D006849 ORTHO05D003348 2.8e-11 72.8 100 39.0
FAN14G5332 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.6e-11 72.4 121 39.7
FAN20G3125 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.6e-11 72.4 117 39.3
FvH4_6g33630 Fragaria vesca HOM05D006849 ORTHO05D003348 4.7e-11 72.0 120 40.0
FAN19G3137 Fragaria x ananassa HOM05D006849 ORTHO05D003348 4.7e-11 72.0 125 36.8
FAN04G0160 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.4e-10 70.5 125 39.2
FAN06G4964 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.4e-10 70.5 106 39.6
FAN16G1806 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.4e-10 70.5 125 39.2
RcHm_v2.0_Chr2g0141711 Rosa chinensis HOM05D006849 ORTHO05D003348 1.4e-10 70.5 120 35.8
FAN03G1780 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.8e-10 70.1 120 36.7
FvH4_5g19920 Fragaria vesca HOM05D006849 ORTHO05D003348 4.0e-10 68.9 125 38.4
FAN06G3145 Fragaria x ananassa HOM05D013178 ORTHO05D019138 4.0e-10 68.9 124 38.7
FAN10G4353 Fragaria x ananassa HOM05D006849 ORTHO05D003348 6.8e-10 68.2 122 39.3
FAN22G1474 Fragaria x ananassa HOM05D006849 ORTHO05D003348 6.8e-10 68.2 148 33.1
FvH4_6g30401 Fragaria vesca HOM05D006849 ORTHO05D003348 8.9e-10 67.8 82 39.0
FAN06G4145 Fragaria x ananassa HOM05D047128 ORTHO05D207868 1.2e-09 67.4 46 71.7
FAN20G2082 Fragaria x ananassa HOM05D006849 ORTHO05D003348 4.4e-09 65.5 121 38.0
FAN25G2444 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.3e-08 63.9 91 37.4
FvH4_3g14392 Fragaria vesca HOM05D000004 ORTHO05D000002 1.7e-08 63.5 84 40.5
RcHm_v2.0_Chr2g0135141 Rosa chinensis HOM05D006849 ORTHO05D003348 2.2e-08 63.2 54 50.0
FAN20G1145 Fragaria x ananassa HOM05D006849 ORTHO05D003348 3.7e-08 62.4 125 29.6
FvH4_4g18140 Fragaria vesca HOM05D006849 ORTHO05D003348 1.1e-07 60.8 102 38.2
RcHm_v2.0_Chr2g0174211 Rosa chinensis HOM05D006849 ORTHO05D003348 1.1e-07 60.8 58 46.6
FAN27G1530 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.4e-07 60.5 61 49.2
FAN23G2888 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.9e-07 60.1 105 39.0
FAN27G2295 Fragaria x ananassa HOM05D006849 ORTHO05D003348 5.4e-07 58.5 120 29.2
FAN15G3621 Fragaria x ananassa HOM05D006849 ORTHO05D003348 1.6e-06 57.0 71 40.8


User provided reference genes

Program Settings