Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G2655 Fragaria x ananassa HOM05D008011 ORTHO05D000277 1.9e-139 499.2 254 100.0
FAN16G1608 Fragaria x ananassa HOM05D008011 ORTHO05D000277 7.4e-120 434.1 226 96.5
FvH4_6g28113 Fragaria vesca HOM05D008011 ORTHO05D000277 2.8e-119 432.2 226 96.0
FAN22G1603 Fragaria x ananassa HOM05D008011 ORTHO05D000277 2.8e-119 432.2 226 96.0
FAN05G2985 Fragaria x ananassa HOM05D008011 ORTHO05D000277 1.2e-117 426.8 226 95.1
FAN20G1132 Fragaria x ananassa HOM05D008011 ORTHO05D000277 1.5e-117 426.4 226 96.0
FAN06G4629 Fragaria x ananassa HOM05D008011 ORTHO05D000277 3.4e-117 425.2 224 95.1
FAN21G0344 Fragaria x ananassa HOM05D008011 ORTHO05D000277 3.4e-117 425.2 226 94.7
FAN27G3399 Fragaria x ananassa HOM05D008011 ORTHO05D000277 1.0e-116 423.7 361 67.0
FAN25G1683 Fragaria x ananassa HOM05D008011 ORTHO05D000277 7.1e-115 417.5 226 93.8
FAN27G0091 Fragaria x ananassa HOM05D008011 ORTHO05D000277 1.7e-108 396.4 205 97.1
FAN09G2726 Fragaria x ananassa HOM05D008011 ORTHO05D000277 2.3e-97 359.4 186 97.8
FAN09G4572 Fragaria x ananassa HOM05D008011 ORTHO05D000277 1.2e-90 337.0 218 80.3
FAN22G0512 Fragaria x ananassa HOM05D008011 ORTHO05D000277 5.3e-86 321.6 233 73.8
FAN13G3039 Fragaria x ananassa HOM05D008011 ORTHO05D000277 1.7e-84 316.6 163 96.9
FAN09G2142 Fragaria x ananassa HOM05D008011 ORTHO05D000277 4.8e-79 298.5 154 96.8
FAN20G0121 Fragaria x ananassa HOM05D008011 ORTHO05D000277 9.8e-72 274.2 146 97.3
FvH4_7g03791 Fragaria vesca HOM05D008011 ORTHO05D012874 6.3e-71 271.6 190 76.8
Prupe.7G013000 Prunus persica HOM05D008011 ORTHO05D000277 1.6e-66 256.9 229 59.4
FAN09G3244 Fragaria x ananassa HOM05D008011 ORTHO05D000277 5.7e-64 248.4 129 98.4
FAN13G1286 Fragaria x ananassa HOM05D008011 ORTHO05D000277 1.3e-60 237.3 124 96.8
FAN22G1221 Fragaria x ananassa HOM05D008011 ORTHO05D000277 2.9e-55 219.5 111 98.2
FAN22G0968 Fragaria x ananassa HOM05D008011 ORTHO05D000277 5.2e-49 198.7 99 99.0
FAN21G1106 Fragaria x ananassa HOM05D008011 ORTHO05D000277 4.4e-48 195.7 105 94.3
FvH4_1g08720 Fragaria vesca HOM05D000034 ORTHO05D000037 1.1e-46 191.0 218 49.5
FAN11G3462 Fragaria x ananassa HOM05D008011 ORTHO05D000277 8.6e-44 181.4 93 94.6
FAN14G5761 Fragaria x ananassa HOM05D008011 ORTHO05D000277 1.6e-42 177.2 230 44.3
FAN04G2547 Fragaria x ananassa HOM05D008011 ORTHO05D000277 3.1e-41 172.9 219 45.7
Atru.chr6.37 Acer truncatum HOM05D000034 ORTHO05D000037 1.3e-36 157.5 223 43.0
FAN22G0897 Fragaria x ananassa HOM05D008011 ORTHO05D000277 5.6e-35 152.1 91 84.6
FvH4_6g20010 Fragaria vesca HOM05D008011 ORTHO05D000277 2.1e-34 150.2 203 41.9
FvH4_5g36380 Fragaria vesca HOM05D008011 ORTHO05D000277 4.7e-34 149.1 199 41.7
FAN18G0511 Fragaria x ananassa HOM05D008011 ORTHO05D000277 6.2e-34 148.7 199 41.7
MD06G1073100 Malus domestica HOM05D008011 ORTHO05D000277 8.9e-33 144.8 223 40.4
FvH4_3g22621 Fragaria vesca HOM05D008011 ORTHO05D045728 2.7e-29 133.3 128 58.6
Prupe.2G067700 Prunus persica HOM05D008011 ORTHO05D000277 3.5e-29 132.9 228 36.8
CANSAT56G2768 Cannabis sativa HOM05D008011 ORTHO05D000277 3.0e-28 129.8 216 38.9
CANSAT80G0212 Cannabis sativa HOM05D008011 ORTHO05D000277 1.1e-27 127.9 223 39.0
CANSAT21G1104 Cannabis sativa HOM05D008011 ORTHO05D000277 5.6e-27 125.6 219 39.3
FvH4_5g01520 Fragaria vesca HOM05D008011 ORTHO05D000277 7.3e-27 125.2 227 37.4
FAN11G0225 Fragaria x ananassa HOM05D008011 ORTHO05D045728 7.3e-27 125.2 172 47.7
FAN18G3785 Fragaria x ananassa HOM05D008011 ORTHO05D000277 1.6e-26 124.0 227 37.0
Ciclev10003205m.g Citrus clementina HOM05D008011 ORTHO05D000277 2.8e-26 123.2 224 37.1
Ciclev10006825m.g Citrus clementina HOM05D008011 ORTHO05D000277 3.6e-26 122.9 224 37.1
FAN13G0966 Fragaria x ananassa HOM05D008011 ORTHO05D000277 3.6e-26 122.9 224 35.3
FAN04G0445 Fragaria x ananassa HOM05D008011 ORTHO05D000277 8.1e-26 121.7 225 36.0
RcHm_v2.0_Chr7g0199171 Rosa chinensis HOM05D008011 ORTHO05D000277 6.9e-25 118.6 225 36.4
FAN08G2404 Fragaria x ananassa HOM05D008011 ORTHO05D000277 2.0e-24 117.1 226 35.0
FAN14G2194 Fragaria x ananassa HOM05D008011 ORTHO05D000277 1.7e-23 114.0 214 33.6
FAN14G2473 Fragaria x ananassa HOM05D008011 ORTHO05D000277 1.1e-22 111.3 166 39.8
CANSAT21G0123 Cannabis sativa HOM05D008011 ORTHO05D000277 2.1e-21 107.1 184 38.0
FAN09G4030 Fragaria x ananassa HOM05D008011 ORTHO05D046351 1.7e-20 104.0 162 37.0
FvH4_4g11702 Fragaria vesca HOM05D008011 ORTHO05D000277 3.9e-20 102.8 156 42.3
FvH4_6g09170 Fragaria vesca HOM05D008011 ORTHO05D046351 1.5e-19 100.9 162 35.8
FAN12G4343 Fragaria x ananassa HOM05D008011 ORTHO05D000277 2.8e-18 96.7 156 41.0
CANSAT11G2641 Cannabis sativa HOM05D008011 ORTHO05D000277 7.6e-16 88.6 220 33.6
Ciclev10003338m.g Citrus clementina HOM05D000034 ORTHO05D000277 6.4e-15 85.5 217 32.7
FAN09G3324 Fragaria x ananassa HOM05D008011 ORTHO05D000277 4.6e-13 79.3 74 48.6
FAN12G2120 Fragaria x ananassa HOM05D008011 ORTHO05D000277 1.8e-12 77.4 102 47.1
Ciclev10013729m.g Citrus clementina HOM05D008011 ORTHO05D000277 3.0e-12 76.6 237 27.8
FAN26G3368 Fragaria x ananassa HOM05D008011 ORTHO05D000277 8.7e-12 75.1 56 58.9
EL10Ac7g17113 Beta vulgaris HOM05D000034 ORTHO05D000277 1.1e-11 74.7 214 30.4
FAN27G2186 Fragaria x ananassa HOM05D008011 ORTHO05D000277 2.5e-11 73.6 57 56.1
FvH4_6g01730 Fragaria vesca HOM05D008011 ORTHO05D000277 5.6e-11 72.4 100 43.0
FAN07G2407 Fragaria x ananassa HOM05D008011 ORTHO05D000277 5.6e-11 72.4 87 46.0
FAN14G4313 Fragaria x ananassa HOM05D008011 ORTHO05D000277 5.6e-11 72.4 100 43.0
FAN23G2795 Fragaria x ananassa HOM05D008011 ORTHO05D000277 2.8e-10 70.1 148 32.4
Ciclev10010415m.g Citrus clementina HOM05D008011 ORTHO05D044637 4.8e-10 69.3 205 27.8
FAN08G1653 Fragaria x ananassa HOM05D008011 ORTHO05D000277 4.8e-10 69.3 99 44.4
EL10Ac3g05873 Beta vulgaris HOM05D000034 ORTHO05D000277 8.1e-10 68.6 231 26.8
Ciclev10023828m.g Citrus clementina HOM05D000034 ORTHO05D000277 4.0e-09 66.2 46 65.2
FAN26G0424 Fragaria x ananassa HOM05D008011 ORTHO05D000277 9.0e-09 65.1 107 43.0
EL10Ac1g00510 Beta vulgaris HOM05D000034 ORTHO05D000277 1.5e-08 64.3 214 28.0
FAN09G3560 Fragaria x ananassa HOM05D008011 ORTHO05D000277 5.8e-08 62.4 40 70.0
CANSAT35G0970 Cannabis sativa HOM05D008011 ORTHO05D000277 9.9e-08 61.6 159 30.2
Ciclev10003262m.g Citrus clementina HOM05D008011 ORTHO05D000277 2.2e-07 60.5 65 40.0
AUR62006275 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.9e-07 60.1 225 25.3
AUR62007737 Chenopodium quinoa HOM05D000034 ORTHO05D000277 6.4e-07 58.9 229 24.0
AUR62035350 Chenopodium quinoa HOM05D000034 ORTHO05D000037 8.4e-07 58.5 224 24.1
FAN02G2328 Fragaria x ananassa HOM05D008011 ORTHO05D000277 8.4e-07 58.5 49 55.1
AUR62035348 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.1e-06 58.2 224 24.1
AUR62001539 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.4e-06 57.8 224 23.7
AUR62041010 Chenopodium quinoa HOM05D000034 ORTHO05D000277 1.4e-06 57.8 220 24.1
AUR62014907 Chenopodium quinoa HOM05D000034 ORTHO05D000277 3.2e-06 56.6 220 24.1
AUR62007596 Chenopodium quinoa HOM05D000034 ORTHO05D000037 4.2e-06 56.2 220 24.1
Rhsim03G0059900 Rhododendron simsii HOM05D000034 ORTHO05D000037 4.2e-06 56.2 220 25.0
AUR62008289 Chenopodium quinoa HOM05D000034 ORTHO05D000277 9.3e-06 55.1 214 25.2
AUR62018157 Chenopodium quinoa HOM05D000034 ORTHO05D000277 9.3e-06 55.1 223 24.7
AUR62022569 Chenopodium quinoa HOM05D000034 ORTHO05D000277 9.3e-06 55.1 220 24.1
Hma1.2p1_1104F.1_g257520 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 9.3e-06 55.1 221 25.8


User provided reference genes

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