Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 2.7e-58 228.4 111 100.0
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 3.3e-56 221.5 111 97.3
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 2.4e-54 215.3 111 94.6
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 2.0e-53 212.2 111 91.9
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 6.6e-49 197.2 99 98.0
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 8.4e-44 180.3 108 78.7
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 3.2e-43 178.3 110 73.6
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 7.1e-43 177.2 99 90.9
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 2.1e-42 175.6 108 75.9
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 1.0e-41 173.3 108 73.1
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 3.0e-41 171.8 110 75.5
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 6.6e-41 170.6 108 72.2
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 6.6e-41 170.6 108 70.4
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 8.7e-41 170.2 108 74.1
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 7.3e-40 167.2 108 72.2
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 7.3e-40 167.2 108 66.7
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 1.6e-39 166.0 111 71.2
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 1.6e-39 166.0 108 74.1
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 4.8e-39 164.5 110 70.9
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 4.8e-39 164.5 110 70.9
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 4.8e-39 164.5 108 72.2
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 4.8e-39 164.5 108 70.4
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 1.1e-38 163.3 110 70.9
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 1.4e-38 162.9 110 70.9
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 3.1e-38 161.8 110 70.0
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 4.0e-38 161.4 108 66.7
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 5.3e-38 161.0 108 67.6
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 6.9e-38 160.6 108 69.4
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 1.5e-37 159.5 107 71.0
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 2.9e-36 155.2 108 68.5
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 3.8e-36 154.8 108 66.7
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 4.9e-36 154.5 109 63.3
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 6.4e-36 154.1 107 69.2
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 6.4e-36 154.1 108 63.9
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 1.1e-35 153.3 108 62.0
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 3.2e-35 151.8 109 63.3
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 4.2e-35 151.4 108 63.0
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 7.1e-35 150.6 108 64.8
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 7.1e-35 150.6 108 62.0
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 1.2e-34 149.8 107 63.6
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 1.6e-34 149.4 109 61.5
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 4.6e-34 147.9 105 66.7
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 4.6e-34 147.9 107 62.6
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 1.3e-33 146.4 108 62.0
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 1.8e-33 146.0 107 62.6
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 2.3e-33 145.6 109 62.4
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 3.9e-33 144.8 108 64.8
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 6.7e-33 144.1 108 64.8
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 1.9e-32 142.5 107 65.4
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 4.3e-32 141.4 111 60.4
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 4.3e-32 141.4 109 60.6
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 9.6e-32 140.2 108 64.8
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 2.1e-31 139.0 108 62.0
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 2.8e-31 138.7 107 59.8
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 3.7e-31 138.3 108 63.0
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 3.7e-31 138.3 108 63.0
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 1.4e-30 136.3 108 51.9
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 2.4e-30 135.6 106 63.2
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 6.9e-30 134.0 109 62.4
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 1.2e-29 133.3 88 71.6
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 2.0e-29 132.5 107 58.9
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 2.0e-29 132.5 108 55.6
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 3.4e-29 131.7 108 60.2
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 4.5e-29 131.3 108 57.4
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 1.7e-28 129.4 108 58.3
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 1.7e-28 129.4 107 57.9
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 2.2e-28 129.0 108 54.6
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 8.4e-28 127.1 107 57.9
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 1.1e-27 126.7 108 58.3
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 1.1e-27 126.7 109 53.2
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 2.4e-27 125.6 108 60.2
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 5.5e-27 124.4 111 54.1
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 7.1e-27 124.0 110 56.4
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 9.3e-27 123.6 108 58.3
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 1.2e-26 123.2 111 54.1
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 3.5e-26 121.7 111 52.3
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 1.0e-25 120.2 111 51.4
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 1.0e-25 120.2 111 51.4
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 1.3e-25 119.8 102 56.9
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 2.3e-25 119.0 70 82.9
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 2.3e-25 119.0 107 56.1
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 3.9e-25 118.2 112 52.7
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 5.1e-25 117.9 118 52.5
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 6.7e-25 117.5 107 53.3
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 7.4e-24 114.0 111 49.5
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 2.1e-23 112.5 111 48.6
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 2.1e-23 112.5 111 48.6
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 2.8e-23 112.1 111 48.6
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 2.8e-23 112.1 111 48.6
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 3.7e-23 111.7 105 53.3
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 3.1e-22 108.6 110 57.3
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 1.2e-21 106.7 111 46.8
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 5.8e-21 104.4 108 50.9
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 3.8e-20 101.7 111 45.9
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 6.5e-20 100.9 67 71.6
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 1.6e-18 96.3 107 44.9
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 2.1e-18 95.9 65 67.7
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 2.7e-18 95.5 65 67.7
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 4.6e-18 94.7 60 78.3
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 2.3e-17 92.4 107 43.0
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 4.1e-14 81.6 106 40.6
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 6.9e-14 80.9 107 38.3
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 1.3e-12 76.6 108 38.9
COL.COLO4_08471 Corchorus olitorius HOM05D007430 ORTHO05D009322 1.0e-09 67.0 37 86.5
VMungo1080G1538 Vigna mungo HOM05D000002 ORTHO05D000001 1.5e-08 63.2 54 46.3
CBR_g37835 Chara braunii HOM05D007430 ORTHO05D009322 2.4e-06 55.8 65 40.0


User provided reference genes

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