Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G2530 Fragaria x ananassa HOM05D018542 ORTHO05D014149 2.7e-110 402.1 222 100.0
FAN14G0258 Fragaria x ananassa HOM05D018542 ORTHO05D014149 1.5e-92 343.2 222 86.9
FvH4_6g07660 Fragaria vesca HOM05D018542 ORTHO05D014149 2.1e-62 243.0 170 85.3
FAN02G3799 Fragaria x ananassa HOM05D018542 ORTHO05D014149 2.2e-59 233.0 176 72.2
RcHm_v2.0_Chr3g0457351 Rosa chinensis HOM05D018542 ORTHO05D014149 4.6e-33 145.6 175 59.4
Prupe.6G311200 Prunus persica HOM05D018542 ORTHO05D014149 5.8e-20 102.1 179 38.5
MD12G1204500 Malus domestica HOM05D018542 ORTHO05D014149 9.3e-18 94.7 180 38.3
CANSAT54G0035 Cannabis sativa HOM05D009154 ORTHO05D014149 2.1e-14 83.6 137 39.4
ClCG10G011600 Citrullus lanatus HOM05D009154 ORTHO05D004310 6.2e-14 82.0 190 31.1
QL12p018988 Quercus lobata HOM05D009154 ORTHO05D004310 9.9e-12 74.7 191 31.9
CsaV3_3G026560 Cucumis sativus L. HOM05D009154 ORTHO05D004310 1.7e-11 73.9 191 29.8
Sed0019931 Sechium edule HOM05D009154 ORTHO05D004310 2.9e-11 73.2 191 31.4
MELO3C012929.2 Cucumis melo HOM05D009154 ORTHO05D004310 4.9e-11 72.4 191 29.3
ECA236G0385 Erigeron canadensis HOM05D009154 ORTHO05D004310 8.4e-11 71.6 96 45.8
Lj1C14T15 Lonicera japonica HOM05D009154 ORTHO05D004310 2.4e-10 70.1 193 32.6
MSTRG.5144 Avicennia marina HOM05D020384 ORTHO05D004310 9.3e-10 68.2 185 31.4
Atru.chr2.269 Acer truncatum HOM05D013055 ORTHO05D004310 2.1e-09 67.0 144 34.7
Aqoxy5G02697 Aquilegia oxysepala HOM05D009154 ORTHO05D004310 2.1e-09 67.0 193 32.6
AUR62011764 Chenopodium quinoa HOM05D009154 ORTHO05D004310 4.6e-09 65.9 184 31.0
AUR62024610 Chenopodium quinoa HOM05D009154 ORTHO05D004310 4.6e-09 65.9 179 31.3
HanXRQChr04g0108411 Helianthus annuus HOM05D009154 ORTHO05D004310 4.6e-09 65.9 95 44.2
Hund16457 Selenicereus undatus HOM05D009154 ORTHO05D004310 4.6e-09 65.9 184 28.3
ClCG09G004940 Citrullus lanatus HOM05D009154 ORTHO05D004310 7.9e-09 65.1 174 36.2
Sed0013714 Sechium edule HOM05D009154 ORTHO05D004310 7.9e-09 65.1 182 30.8
Sed0003021 Sechium edule HOM05D009154 ORTHO05D004310 3.0e-08 63.2 194 30.4
Ah.11g049040 Amaranthus hybridus HOM05D009154 ORTHO05D004310 3.9e-08 62.8 84 40.5
ECA233G3364 Erigeron canadensis HOM05D009154 ORTHO05D004310 6.7e-08 62.0 178 30.3
MELO3C015909.2 Cucumis melo HOM05D009154 ORTHO05D004310 8.7e-08 61.6 183 30.6
Ciclev10002618m.g Citrus clementina HOM05D013055 ORTHO05D014149 1.1e-07 61.2 180 28.9
TPR.G33868 Trifolium pratense HOM05D007634 ORTHO05D004310 1.5e-07 60.8 177 28.8
Manes.05G013000 Manihot esculenta HOM05D009154 ORTHO05D004310 3.3e-07 59.7 192 31.2
CSS0041924 Camellia sinensis var. sinensis HOM05D015885 ORTHO05D012930 1.6e-06 57.4 185 28.6
HanXRQChr08g0232271 Helianthus annuus HOM05D009154 ORTHO05D004310 8.1e-06 55.1 92 40.2


User provided reference genes

Program Settings