Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G2526 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.9e-203 711.8 406 100.0
FAN02G2870 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.1e-189 666.8 405 95.3
FAN14G0787 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.8e-189 666.0 405 94.3
FvH4_6g11320 Fragaria vesca HOM05D003726 ORTHO05D003520 4.5e-188 661.4 415 90.1
RcHm_v2.0_Chr3g0462881 Rosa chinensis HOM05D003726 ORTHO05D003520 5.6e-162 574.7 413 81.1
FAN14G4204 Fragaria x ananassa HOM05D003726 ORTHO05D003520 5.2e-144 515.0 330 90.0
Prupe.6G278700 Prunus persica HOM05D003726 ORTHO05D003520 9.7e-98 361.3 427 56.7
MD12G1168500 Malus domestica HOM05D003726 ORTHO05D003520 3.5e-87 326.2 420 52.6
MD04G1154900 Malus domestica HOM05D003726 ORTHO05D003520 2.1e-84 317.0 419 49.2
QL07p035285 Quercus lobata HOM05D003726 ORTHO05D003520 3.2e-56 223.4 422 39.3
Cfa017195 Carpinus fangiana HOM05D003726 ORTHO05D003520 3.6e-52 209.9 409 39.4
Haze_21015 Corylus avellana HOM05D003726 ORTHO05D003520 1.7e-49 201.1 409 37.4
Manes.09G107700 Manihot esculenta HOM05D003726 ORTHO05D003520 4.6e-47 193.0 416 36.3
Duzib128G0808 Durio zibethinus HOM05D003726 ORTHO05D003520 4.3e-45 186.4 421 36.8
Cpa.g.sc11.124 Carica papaya HOM05D003726 ORTHO05D003520 2.3e-43 180.6 433 35.1
Ciclev10011806m.g Citrus clementina HOM05D003726 ORTHO05D003520 2.3e-43 180.6 427 36.3
CiPaw.09G210300 Carya illinoinensis HOM05D003726 ORTHO05D003520 5.2e-43 179.5 414 37.0
Thecc.05G014300 Theobroma cacao HOM05D003726 ORTHO05D003520 1.5e-42 177.9 424 36.6
Potri.016G117400 Populus trichocarpa HOM05D003726 ORTHO05D003520 1.9e-40 171.0 434 35.0
Duzib093G1061 Durio zibethinus HOM05D003726 ORTHO05D003520 2.1e-39 167.5 427 35.6
Atru.chr8.2256 Acer truncatum HOM05D003726 ORTHO05D003520 4.6e-39 166.4 427 34.4
TAR369G0146 Trochodendron aralioides HOM05D003726 ORTHO05D003520 3.6e-36 156.8 408 38.2
Dinv14505 Davidia involucrata HOM05D003726 ORTHO05D003520 6.8e-35 152.5 411 31.9
Sabra16G0113500 Salix brachista HOM05D003726 ORTHO05D003520 1.2e-34 151.8 433 33.3
TWI53G1918 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 1.2e-34 151.8 410 33.2
Phvul.010G076500 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 9.9e-34 148.7 415 33.0
GSVIVG01011170001 Vitis vinifera HOM05D003726 ORTHO05D003520 1.7e-33 147.9 419 32.9
CSS0035019 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 6.4e-33 146.0 423 32.2
TWI74G0063 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 6.4e-33 146.0 419 32.2
ClCG10G022200 Citrullus lanatus HOM05D003726 ORTHO05D003520 1.4e-32 144.8 412 32.3
Glyma.03G056800 Glycine max HOM05D003726 ORTHO05D003520 1.7e-30 137.9 428 32.2
CsaV3_3G033690 Cucumis sativus L. HOM05D003726 ORTHO05D003520 3.0e-30 137.1 419 33.4
Actinidia05361 Actinidia chinensis HOM05D003726 ORTHO05D003520 6.6e-30 136.0 469 30.3
Sed0008005 Sechium edule HOM05D003726 ORTHO05D003520 2.5e-29 134.0 417 32.9
VMungo0331G0804 Vigna mungo HOM05D003726 ORTHO05D003520 3.3e-29 133.7 374 34.5
COL.COLO4_14518 Corchorus olitorius HOM05D003726 ORTHO05D003520 5.6e-29 132.9 414 31.9
CSS0024143 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.3e-28 131.7 416 30.8
Nn2g10861 Nelumbo nucifera HOM05D003726 ORTHO05D003520 1.3e-28 131.7 430 35.8
VMungo1383G2513 Vigna mungo HOM05D003726 ORTHO05D003520 1.3e-28 131.7 413 32.0
MELO3C009159.2 Cucumis melo HOM05D003726 ORTHO05D003520 1.6e-28 131.3 417 32.9
Gohir.A09G165800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 2.8e-28 130.6 410 31.7
TAR623G0590 Trochodendron aralioides HOM05D003726 ORTHO05D003520 4.8e-28 129.8 420 36.0
Gorai.006G183100 Gossypium raimondii HOM05D003726 ORTHO05D003520 6.2e-28 129.4 410 31.7
Gohir.D09G161366 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.4e-27 128.3 415 32.0
arahy.Tifrunner.gnm1.ann1.DIZ6KI Arachis hypogaea HOM05D003726 ORTHO05D003520 5.3e-27 126.3 432 33.8
Lj3g0010607 Lotus japonicus HOM05D003726 ORTHO05D003520 5.3e-27 126.3 432 30.8
arahy.Tifrunner.gnm1.ann1.3NQ7J1 Arachis hypogaea HOM05D003726 ORTHO05D003520 6.9e-27 125.9 432 33.8
Glyma.18G202500 Glycine max HOM05D003726 ORTHO05D003520 1.2e-26 125.2 422 29.4
Gorai.012G114900 Gossypium raimondii HOM05D003726 ORTHO05D003520 2.6e-26 124.0 417 30.5
Oeu005176.1 Olea europaea HOM05D003726 ORTHO05D003520 4.4e-26 123.2 406 29.1
Glyma.07G151200 Glycine max HOM05D003726 ORTHO05D003520 5.8e-26 122.9 422 28.4
Glyma.01G120800 Glycine max HOM05D003726 ORTHO05D003520 9.9e-26 122.1 417 31.4
Gohir.D04G131050 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.7e-25 121.3 417 30.5
Cfa011708 Carpinus fangiana HOM05D003726 ORTHO05D003520 2.2e-25 120.9 430 31.2
PGR031G0398 Punica granatum HOM05D003726 ORTHO05D003520 2.2e-25 120.9 425 29.4
QL01p038574 Quercus lobata HOM05D003726 ORTHO05D003520 6.4e-25 119.4 438 34.2
Lalb_Chr07g0193641 Lupinus albus HOM05D003726 ORTHO05D003520 1.1e-24 118.6 406 28.6
THA.LOC104816197 Tarenaya hassleriana HOM05D013727 ORTHO05D003520 1.4e-24 118.2 431 29.9
Nn2g13146 Nelumbo nucifera HOM05D003726 ORTHO05D003520 7.1e-24 115.9 421 32.8
Actinidia11576 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.6e-23 114.8 409 30.3
Phvul.008G098200 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 2.7e-23 114.0 412 28.9
TPR.G13333 Trifolium pratense HOM05D003726 ORTHO05D003520 2.7e-23 114.0 439 32.3
Duzib170G0773 Durio zibethinus HOM05D003726 ORTHO05D003520 4.6e-23 113.2 316 33.9
Medtr4g015650 Medicago truncatula HOM05D003726 ORTHO05D003520 3.0e-22 110.5 425 31.5
CiPaw.13G076400 Carya illinoinensis HOM05D003726 ORTHO05D003520 5.1e-22 109.8 433 31.4
Cpa.g.sc112.4 Carica papaya HOM05D003726 ORTHO05D003520 6.6e-22 109.4 427 31.6
COL.COLO4_19173 Corchorus olitorius HOM05D003726 ORTHO05D003520 1.9e-21 107.8 435 31.5
Thecc.09G299900 Theobroma cacao HOM05D003726 ORTHO05D003520 3.3e-21 107.1 420 32.9
Psat7g245680 Pisum sativum HOM05D003726 ORTHO05D003520 9.6e-21 105.5 425 35.1
Gohir.A05G087800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 3.6e-20 103.6 437 27.7
CiPaw.14G058500 Carya illinoinensis HOM05D003726 ORTHO05D003520 1.1e-19 102.1 421 28.0
Gorai.009G091100 Gossypium raimondii HOM05D003726 ORTHO05D003520 1.1e-19 102.1 432 26.9
Oeu054393.1 Olea europaea HOM05D003726 ORTHO05D003520 1.1e-19 102.1 416 28.4
Nitab4.5_0000261g0020 Nicotiana tabacum HOM05D003726 ORTHO05D003520 1.4e-19 101.7 418 28.0
Aqoxy4G02538 Aquilegia oxysepala HOM05D003726 ORTHO05D003520 1.8e-19 101.3 418 26.6
CANSAT54G2733 Cannabis sativa HOM05D003726 ORTHO05D003520 1.8e-19 101.3 422 30.3
Gohir.D05G088900 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.8e-19 101.3 431 27.6
DCAR_024016 Daucus carota HOM05D003726 ORTHO05D003520 3.1e-19 100.5 181 40.9
Eucgr.A00522 Eucalyptus grandis HOM05D003726 ORTHO05D003520 4.0e-19 100.1 410 31.0
Nitab4.5_0002020g0040 Nicotiana tabacum HOM05D003726 ORTHO05D003520 4.0e-19 100.1 403 27.0
MSTRG.26816 Avicennia marina HOM05D003726 ORTHO05D003520 6.9e-19 99.4 416 29.3
PGR102G0699 Punica granatum HOM05D003726 ORTHO05D003520 3.4e-18 97.1 403 28.5
Solyc09g005570.3 Solanum lycopersicum HOM05D003726 ORTHO05D003520 4.5e-18 96.7 167 39.5
Sopen09g001480 Solanum pennellii HOM05D003726 ORTHO05D003520 4.5e-18 96.7 167 39.5
Duzib168G1865 Durio zibethinus HOM05D003726 ORTHO05D003520 5.8e-18 96.3 425 31.1
Peaxi162Scf00170g00213 Petunia axillaris HOM05D003726 ORTHO05D003520 5.8e-18 96.3 163 41.7
Actinidia34457 Actinidia chinensis HOM05D003726 ORTHO05D003520 7.6e-18 95.9 423 27.9
CSS0025538 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 9.9e-18 95.5 348 28.7
PGSC0003DMG400030244 Solanum tuberosum HOM05D003726 ORTHO05D003520 1.3e-17 95.1 169 38.5
MBI03_g32367_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 1.7e-17 94.7 434 29.5
EL10Ac7g16184 Beta vulgaris HOM05D003726 ORTHO05D003520 2.9e-17 94.0 418 27.8
CSS0029870 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 3.8e-17 93.6 348 28.4
Peaxi162Scf79720g00003 Petunia axillaris HOM05D003726 ORTHO05D003520 4.9e-17 93.2 162 40.1
Actinidia23884 Actinidia chinensis HOM05D003726 ORTHO05D003520 8.4e-17 92.4 425 26.6
Sabra09G0034300 Salix brachista HOM05D003726 ORTHO05D003520 2.4e-16 90.9 425 28.5
Dinv28651 Davidia involucrata HOM05D003726 ORTHO05D003520 3.2e-16 90.5 432 25.9
Lalb_Chr12g0207011 Lupinus albus HOM05D003726 ORTHO05D003520 7.1e-16 89.4 133 44.4
MBI03_g31834_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 7.1e-16 89.4 442 29.6
CSS0031801 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 9.3e-16 89.0 423 28.6
FAN16G2238 Fragaria x ananassa HOM05D003726 ORTHO05D003520 9.3e-16 89.0 412 27.2
Lsat_1_v5_gn_5_149441 Lactuca sativa HOM05D003726 ORTHO05D003520 9.3e-16 89.0 267 30.3
Potri.009G046900 Populus trichocarpa HOM05D003726 ORTHO05D003520 1.2e-15 88.6 431 28.5
Migut.L02021 Erythranthe guttata HOM05D003726 ORTHO05D003520 1.6e-15 88.2 432 26.9
Haze_24339 Corylus avellana HOM05D003726 ORTHO05D003520 2.1e-15 87.8 420 30.2
FAN25G1890 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.7e-15 87.4 411 27.5
Eucgr.B02248 Eucalyptus grandis HOM05D003726 ORTHO05D003520 6.0e-15 86.3 415 27.0
Sed0002259 Sechium edule HOM05D003726 ORTHO05D003520 1.0e-14 85.5 404 26.0
DCAR_005887 Daucus carota HOM05D003726 ORTHO05D003520 1.8e-14 84.7 420 25.0
TWI31G1278 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 3.0e-14 84.0 416 25.5
AUR62020147 Chenopodium quinoa HOM05D003726 ORTHO05D003520 3.9e-14 83.6 408 26.2
MELO3C020542.2 Cucumis melo HOM05D003726 ORTHO05D003520 5.1e-14 83.2 412 24.8
Manes.02G118700 Manihot esculenta HOM05D003726 ORTHO05D003520 5.1e-14 83.2 427 27.4
Hma1.2p1_0962F.1_g241820 Hydrangea macrophylla HOM05D003726 ORTHO05D003520 6.7e-14 82.8 428 26.9
SGA_v2.0_scaffold110G31210 Striga asiatica HOM05D003726 ORTHO05D003520 8.7e-14 82.4 408 25.7
FAN21G3554 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.5e-13 81.6 412 26.5
Ah.08g221410 Amaranthus hybridus HOM05D003726 ORTHO05D003520 1.9e-13 81.3 424 25.0
MD03G1068300 Malus domestica HOM05D003726 ORTHO05D003520 1.9e-13 81.3 404 28.0
arahy.Tifrunner.gnm1.ann1.W084UE Arachis hypogaea HOM05D003726 ORTHO05D003520 4.3e-13 80.1 382 25.1
CsaV3_1G036240 Cucumis sativus L. HOM05D003726 ORTHO05D003520 4.3e-13 80.1 413 26.2
FvH4_3g38760 Fragaria vesca HOM05D003726 ORTHO05D003520 4.3e-13 80.1 409 29.1
RcHm_v2.0_Chr5g0069911 Rosa chinensis HOM05D003726 ORTHO05D003520 4.3e-13 80.1 407 24.1
AUR62030799 Chenopodium quinoa HOM05D029928 ORTHO05D003520 5.6e-13 79.7 197 38.6
CSS0008670 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 9.6e-13 79.0 435 28.5
FAN11G0812 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.1e-12 77.8 409 28.9
arahy.Tifrunner.gnm1.ann1.P4YYRQ Arachis hypogaea HOM05D003726 ORTHO05D003520 2.8e-12 77.4 179 35.2
Carub.0006s0045 Capsella rubella HOM05D013727 ORTHO05D003520 2.8e-12 77.4 441 30.6
AT5G01370 Arabidopsis thaliana HOM05D013727 ORTHO05D003520 4.8e-12 76.6 453 26.5
Thhalv10016075m.g Eutrema salsugineum HOM05D013727 ORTHO05D003520 6.2e-12 76.3 449 26.7
arahy.Tifrunner.gnm1.ann1.IE2B4C Arachis hypogaea HOM05D003726 ORTHO05D003520 8.1e-12 75.9 183 34.4
Aa31LG1G23030 Aethionema arabicum HOM05D013727 ORTHO05D003520 1.1e-11 75.5 436 29.1
Prupe.6G056200 Prunus persica HOM05D003726 ORTHO05D003520 1.8e-11 74.7 386 25.1
arahy.Tifrunner.gnm1.ann1.142K7L Arachis hypogaea HOM05D003726 ORTHO05D003520 4.0e-11 73.6 135 34.1
BolC2t06018H Brassica oleracea HOM05D013727 ORTHO05D003520 4.0e-11 73.6 440 30.2
Atru.chr3.4198 Acer truncatum HOM05D003726 ORTHO05D003520 5.3e-11 73.2 439 30.8
arahy.Tifrunner.gnm1.ann1.71KX3G Arachis hypogaea HOM05D003726 ORTHO05D003520 1.2e-10 72.0 374 24.9
Lalb_Chr18g0050991 Lupinus albus HOM05D003726 ORTHO05D003520 1.2e-10 72.0 420 25.5
Phvul.008G260800 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 1.5e-10 71.6 422 25.1
CARHR211750 Cardamine hirsuta HOM05D013727 ORTHO05D003520 2.0e-10 71.2 449 27.8
SalBow4G2563 Salvia bowleyana HOM05D003726 ORTHO05D003520 2.0e-10 71.2 408 29.7
Rhsim13G0068300 Rhododendron simsii HOM05D003726 ORTHO05D003520 2.6e-10 70.9 412 25.5
AUR62001632 Chenopodium quinoa HOM05D003726 ORTHO05D003520 3.4e-10 70.5 163 33.7
Rhsim01G0236900 Rhododendron simsii HOM05D003726 ORTHO05D003520 3.4e-10 70.5 432 26.9
EL10Ac5g12551 Beta vulgaris HOM05D029928 ORTHO05D003520 7.6e-10 69.3 404 25.0
ClCG03G000690 Citrullus lanatus HOM05D003726 ORTHO05D003520 1.3e-09 68.6 412 25.2
MD11G1072700 Malus domestica HOM05D003726 ORTHO05D003520 1.3e-09 68.6 370 29.7
CARHR272490 Cardamine hirsuta HOM05D011448 ORTHO05D003520 1.7e-09 68.2 404 24.3
Sed0010018 Sechium edule HOM05D003726 ORTHO05D003520 2.2e-09 67.8 164 31.1
Nitab4.5_0008578g0030 Nicotiana tabacum HOM05D003726 ORTHO05D003520 2.9e-09 67.4 174 33.9
AL6G10750 Arabidopsis lyrata HOM05D013727 ORTHO05D003520 3.8e-09 67.0 446 25.3
Sp6g40680 Schrenkiella parvula HOM05D013727 ORTHO05D003520 4.9e-09 66.6 144 36.8
Hund11000 Selenicereus undatus HOM05D046068 ORTHO05D003520 4.9e-09 66.6 178 31.5
Lj1P136T16 Lonicera japonica HOM05D003726 ORTHO05D003520 1.4e-08 65.1 306 26.5
Hund29902 Selenicereus undatus HOM05D046068 ORTHO05D003520 1.4e-08 65.1 181 29.8
Glyma.02G227100 Glycine max HOM05D003726 ORTHO05D003520 1.9e-08 64.7 420 26.2
Glyma.14G194200 Glycine max HOM05D003726 ORTHO05D003520 3.2e-08 63.9 422 25.4
LjContig00155g0026227 Lotus japonicus HOM05D003726 ORTHO05D003520 3.2e-08 63.9 414 24.4
Cc01_g14320 Coffea canephora HOM05D003726 ORTHO05D003520 5.5e-08 63.2 427 22.2
PSO339G6116 Papaver somniferum HOM05D003726 ORTHO05D003520 1.2e-07 62.0 423 22.5
Hund20990 Selenicereus undatus HOM05D003726 ORTHO05D003520 2.1e-07 61.2 435 22.8
TPR.G15189 Trifolium pratense HOM05D003726 ORTHO05D003520 3.5e-07 60.5 420 23.6
Sc07g0006660 Simmondsia chinensis HOM05D003726 ORTHO05D003520 4.6e-07 60.1 424 23.3
Psat5g158000 Pisum sativum HOM05D003726 ORTHO05D003520 6.0e-07 59.7 146 29.5
Sp6g20330 Schrenkiella parvula HOM05D011448 ORTHO05D003520 6.0e-07 59.7 137 32.1
Glyma.11G174300 Glycine max HOM05D003726 ORTHO05D003520 3.9e-06 57.0 421 22.1
VMungo0647G1535 Vigna mungo HOM05D003726 ORTHO05D003520 3.9e-06 57.0 419 25.5
Medtr3g464300 Medicago truncatula HOM05D003726 ORTHO05D003520 5.1e-06 56.6 169 29.0
THA.LOC104810708 Tarenaya hassleriana HOM05D003726 ORTHO05D003520 8.7e-06 55.8 405 23.7


User provided reference genes

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