Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G2504 Fragaria x ananassa HOM05D008065 ORTHO05D010197 3.1e-143 511.9 281 100.0
FvH4_6g43950 Fragaria vesca HOM05D008065 ORTHO05D010197 5.5e-92 341.7 192 85.9
FAN05G2598 Fragaria x ananassa HOM05D008065 ORTHO05D010197 4.7e-91 338.6 192 85.4
RcHm_v2.0_Chr2g0160731 Rosa chinensis HOM05D008065 ORTHO05D010197 1.1e-63 247.7 194 62.9
RcHm_v2.0_Chr2g0160721 Rosa chinensis HOM05D008065 ORTHO05D010197 3.3e-44 183.0 195 47.7
MD17G1089400 Malus domestica HOM05D008065 ORTHO05D010197 1.1e-42 177.9 182 50.5
Prupe.3G224100 Prunus persica HOM05D008065 ORTHO05D010197 1.4e-42 177.6 167 53.9
MD09G1101800 Malus domestica HOM05D008065 ORTHO05D010197 1.8e-42 177.2 167 52.7
RcHm_v2.0_Chr2g0160741 Rosa chinensis HOM05D008065 ORTHO05D010197 4.4e-41 172.6 195 48.2
Prupe.3G223900 Prunus persica HOM05D008065 ORTHO05D010197 7.5e-41 171.8 168 53.6
FvH4_6g43960 Fragaria vesca HOM05D008065 ORTHO05D010197 2.2e-40 170.2 194 48.5
FvH4_6g44000 Fragaria vesca HOM05D008065 ORTHO05D010197 3.2e-39 166.4 205 44.9
MD17G1089200 Malus domestica HOM05D008065 ORTHO05D010197 7.1e-39 165.2 167 50.3
RcHm_v2.0_Chr2g0160711 Rosa chinensis HOM05D008065 ORTHO05D010197 3.5e-38 162.9 172 53.5
Sabra11G0031000 Salix brachista HOM05D008065 ORTHO05D010197 1.0e-37 161.4 173 49.1
Sabra15G0043300 Salix brachista HOM05D008065 ORTHO05D010197 5.1e-37 159.1 170 48.8
Sabra15G0047700 Salix brachista HOM05D008065 ORTHO05D010197 5.1e-37 159.1 170 48.8
FvH4_6g43940 Fragaria vesca HOM05D008065 ORTHO05D010197 1.9e-36 157.1 171 51.5
Sabra19G0132700 Salix brachista HOM05D008065 ORTHO05D010197 2.5e-36 156.8 173 47.4
MD17G1089600 Malus domestica HOM05D008065 ORTHO05D010197 7.3e-36 155.2 165 49.1
Sabra15G0059600 Salix brachista HOM05D008065 ORTHO05D010197 2.8e-35 153.3 170 47.6
Potri.013G151700 Populus trichocarpa HOM05D008065 ORTHO05D010197 6.2e-35 152.1 181 45.9
Manes.14G109200 Manihot esculenta HOM05D008065 ORTHO05D010197 1.4e-34 151.0 168 51.2
FAN25G1826 Fragaria x ananassa HOM05D008065 ORTHO05D010197 5.2e-34 149.1 169 47.9
MD17G1089300 Malus domestica HOM05D008065 ORTHO05D010197 6.8e-34 148.7 167 46.7
RcHm_v2.0_Chr7g0197991 Rosa chinensis HOM05D008065 ORTHO05D010197 2.4e-31 140.2 194 43.3
Dinv18567 Davidia involucrata HOM05D008065 ORTHO05D010197 7.1e-31 138.7 182 45.1
FAN10G0045 Fragaria x ananassa HOM05D008065 ORTHO05D010197 6.2e-27 125.6 195 42.1
FAN10G1752 Fragaria x ananassa HOM05D008065 ORTHO05D010197 2.4e-26 123.6 207 39.6
FvH4_1g28610 Fragaria vesca HOM05D008065 ORTHO05D010197 1.5e-25 120.9 207 39.6
Dinv18565 Davidia involucrata HOM05D008065 ORTHO05D010197 4.4e-25 119.4 183 43.2
Sabra15G0045000 Salix brachista HOM05D008065 ORTHO05D010197 4.4e-25 119.4 178 43.3
Sabra15G0045500 Salix brachista HOM05D008065 ORTHO05D010197 4.4e-25 119.4 178 43.3
Sabra15G0060600 Salix brachista HOM05D008065 ORTHO05D010197 4.4e-25 119.4 178 42.1
Sabra15G0046200 Salix brachista HOM05D008065 ORTHO05D010197 7.6e-25 118.6 178 42.1
Sabra15G0060400 Salix brachista HOM05D008065 ORTHO05D010197 7.6e-25 118.6 175 42.9
Sabra15G0054100 Salix brachista HOM05D008065 ORTHO05D010197 9.9e-25 118.2 212 38.7
Sabra15G0048600 Salix brachista HOM05D008065 ORTHO05D010197 2.9e-24 116.7 178 42.1
Dinv10888 Davidia involucrata HOM05D008065 ORTHO05D010197 5.1e-21 105.9 198 35.4
Rhsim04G0058500 Rhododendron simsii HOM05D008065 ORTHO05D010197 1.5e-20 104.4 178 39.9
Sabra19G0121400 Salix brachista HOM05D008065 ORTHO05D010197 1.5e-20 104.4 117 46.2
FAN03G2096 Fragaria x ananassa HOM05D008065 ORTHO05D010197 1.9e-20 104.0 196 39.3
FAN09G1452 Fragaria x ananassa HOM05D008065 ORTHO05D010197 1.9e-20 104.0 126 43.7
Dinv13863 Davidia involucrata HOM05D008065 ORTHO05D010197 1.3e-19 101.3 172 38.4
FAN22G1032 Fragaria x ananassa HOM05D008065 ORTHO05D010197 1.3e-19 101.3 113 49.6
Sabra15G0044700 Salix brachista HOM05D008065 ORTHO05D010197 1.3e-19 101.3 114 45.6
Dinv23650 Davidia involucrata HOM05D008065 ORTHO05D010197 2.4e-18 97.1 214 34.1
FAN22G2159 Fragaria x ananassa HOM05D008065 ORTHO05D010197 9.0e-18 95.1 108 49.1
FvH4_7g14510 Fragaria vesca HOM05D008065 ORTHO05D010197 1.5e-17 94.4 232 32.8
FAN06G3397 Fragaria x ananassa HOM05D008065 ORTHO05D010197 2.9e-16 90.1 232 32.3
Manes.15G019150 Manihot esculenta HOM05D008065 ORTHO05D010197 1.4e-15 87.8 170 38.2
FAN06G4565 Fragaria x ananassa HOM05D008065 ORTHO05D010197 2.4e-15 87.0 232 31.9
FAN25G0063 Fragaria x ananassa HOM05D008065 ORTHO05D010197 5.4e-15 85.9 95 49.5
Rhsim04G0060100 Rhododendron simsii HOM05D008065 ORTHO05D010197 7.1e-15 85.5 174 35.6
Cc05_g05590 Coffea canephora HOM05D008065 ORTHO05D010197 2.7e-14 83.6 174 35.1
FAN27G1105 Fragaria x ananassa HOM05D008065 ORTHO05D010197 3.5e-14 83.2 91 48.4
FAN02G2083 Fragaria x ananassa HOM05D008065 ORTHO05D010197 1.3e-13 81.3 171 35.7
vmacro23257 Vaccinium macrocarpon HOM05D008065 ORTHO05D010197 9.6e-12 75.1 174 33.9
SGA_v2.0_scaffold34G13739 Striga asiatica HOM05D000051 ORTHO05D000015 1.3e-11 74.7 195 27.7
MD17G1089500 Malus domestica HOM05D008065 ORTHO05D010197 1.6e-11 74.3 63 57.1
Nn1g06755 Nelumbo nucifera HOM05D001396 ORTHO05D000493 1.4e-10 71.2 200 26.0
SGA_v2.0_scaffold3G01573 Striga asiatica HOM05D001396 ORTHO05D000493 2.4e-10 70.5 190 25.3
MBI02_g37280_MAGBIO Magnolia biondii HOM05D000051 ORTHO05D010197 4.0e-10 69.7 194 28.9
Dinv40495 Davidia involucrata HOM05D000051 ORTHO05D000493 5.3e-10 69.3 180 26.7
GSVIVG01003198001 Vitis vinifera HOM05D001396 ORTHO05D000493 5.3e-10 69.3 191 24.1
Sabra15G0052300 Salix brachista HOM05D008065 ORTHO05D010197 9.0e-10 68.6 96 40.6
Dinv18999 Davidia involucrata HOM05D001396 ORTHO05D000493 2.0e-09 67.4 202 25.7
Dinv39824 Davidia involucrata HOM05D001396 ORTHO05D000493 2.0e-09 67.4 202 25.7
CSS0042645 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000493 3.4e-09 66.6 186 26.9
SGA_v2.0_scaffold3G01569 Striga asiatica HOM05D001396 ORTHO05D000493 4.5e-09 66.2 199 24.1
SGA_v2.0_scaffold835G53654 Striga asiatica HOM05D001396 ORTHO05D000493 4.5e-09 66.2 199 24.1
Carub.0005s1911 Capsella rubella HOM05D000051 ORTHO05D000015 9.9e-09 65.1 166 28.9
CDE02G0635 Ceratophyllum demersum HOM05D000312 ORTHO05D000493 9.9e-09 65.1 184 28.3
Sabra15G0053500 Salix brachista HOM05D008065 ORTHO05D010197 1.3e-08 64.7 159 34.0
CDE05G1832 Ceratophyllum demersum HOM05D000051 ORTHO05D000493 2.2e-08 63.9 184 27.7
Dinv17822 Davidia involucrata HOM05D000051 ORTHO05D000015 2.2e-08 63.9 168 31.0
Dinv39821 Davidia involucrata HOM05D001396 ORTHO05D000493 2.9e-08 63.5 193 24.9
Rhsim06G0150800 Rhododendron simsii HOM05D001396 ORTHO05D000493 2.9e-08 63.5 208 27.4
TAR633G2603 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.9e-08 63.5 182 31.3
Aqoxy1G00620 Aquilegia oxysepala HOM05D000051 ORTHO05D000493 3.8e-08 63.2 170 27.6
FvH4_6g43970 Fragaria vesca HOM05D008065 ORTHO05D010197 3.8e-08 63.2 59 57.6
MSTRG.15164 Avicennia marina HOM05D000051 ORTHO05D000015 4.9e-08 62.8 197 30.5
TAR624G0688 Trochodendron aralioides HOM05D001396 ORTHO05D000493 4.9e-08 62.8 183 29.5
ECA240G4277 Erigeron canadensis HOM05D000051 ORTHO05D000015 1.1e-07 61.6 204 27.9
Dinv18995 Davidia involucrata HOM05D001396 ORTHO05D000493 1.4e-07 61.2 190 26.8
FAN09G2817 Fragaria x ananassa HOM05D066102 ORTHO05D010197 1.4e-07 61.2 71 46.5
Nn5g28221 Nelumbo nucifera HOM05D000051 ORTHO05D000015 1.9e-07 60.8 166 27.7
Ciclev10020079m.g Citrus clementina HOM05D000576 ORTHO05D000368 3.2e-07 60.1 169 24.3
Aqoxy1G02225 Aquilegia oxysepala HOM05D000051 ORTHO05D000493 4.2e-07 59.7 172 29.1
CSS0005231 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 4.2e-07 59.7 195 25.1
ECA233G2529 Erigeron canadensis HOM05D000211 ORTHO05D002517 4.2e-07 59.7 191 25.7
Hma1.2p1_0144F.1_g064650 Hydrangea macrophylla HOM05D001396 ORTHO05D000493 7.1e-07 58.9 164 26.2
Ciclev10008358m.g Citrus clementina HOM05D000576 ORTHO05D000368 9.3e-07 58.5 166 23.5
Dinv39822 Davidia involucrata HOM05D001396 ORTHO05D000493 9.3e-07 58.5 185 28.6
Dinv40491 Davidia involucrata HOM05D001396 ORTHO05D000493 9.3e-07 58.5 196 26.5
PGSC0003DMG400006279 Solanum tuberosum HOM05D001396 ORTHO05D000493 9.3e-07 58.5 188 27.1
Dinv03144 Davidia involucrata HOM05D000051 ORTHO05D000843 1.2e-06 58.2 167 29.3
Manes.06G063451 Manihot esculenta HOM05D008065 ORTHO05D010197 1.6e-06 57.8 46 58.7
Oeu007604.1 Olea europaea HOM05D000051 ORTHO05D000015 1.6e-06 57.8 208 27.4
Thecc.08G187100 Theobroma cacao HOM05D000576 ORTHO05D000368 1.6e-06 57.8 167 27.5
Solyc07g054370.3 Solanum lycopersicum HOM05D001396 ORTHO05D000493 2.1e-06 57.4 196 26.0
Peaxi162Scf00338g00627 Petunia axillaris HOM05D001396 ORTHO05D000493 2.7e-06 57.0 185 23.8
Lsat_1_v5_gn_8_126220 Lactuca sativa HOM05D001396 ORTHO05D000493 3.5e-06 56.6 190 24.7
Dinv40730 Davidia involucrata HOM05D000051 ORTHO05D000015 4.6e-06 56.2 205 29.8
Migut.M01792 Erythranthe guttata HOM05D000051 ORTHO05D000015 4.6e-06 56.2 170 28.2
Peaxi162Scf00650g00350 Petunia axillaris HOM05D001396 ORTHO05D000493 4.6e-06 56.2 190 26.8
Peaxi162Scf01070g00031 Petunia axillaris HOM05D005268 ORTHO05D000493 6.0e-06 55.8 185 24.9
MBI18_g07609_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D000368 7.9e-06 55.5 170 26.5
QL05p016344 Quercus lobata HOM05D001477 ORTHO05D001182 7.9e-06 55.5 187 23.0


User provided reference genes

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