Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G2441 Fragaria x ananassa HOM05D000189 ORTHO05D006628 1.8e-46 188.7 87 100.0
FAN09G1857 Fragaria x ananassa HOM05D000298 ORTHO05D006628 2.8e-42 174.9 112 77.7
FvH4_6g45310 Fragaria vesca HOM05D000189 ORTHO05D006628 3.4e-40 167.9 106 77.4
FAN14G4610 Fragaria x ananassa HOM05D000298 ORTHO05D006628 9.8e-40 166.4 106 77.4
FAN05G4849 Fragaria x ananassa HOM05D000298 ORTHO05D000553 7.0e-38 160.2 106 74.5
RcHm_v2.0_Chr2g0163071 Rosa chinensis HOM05D000189 ORTHO05D006628 2.8e-34 148.3 100 72.0
CiPaw.03G060200 Carya illinoinensis HOM05D000189 ORTHO05D006628 1.0e-28 129.8 100 63.0
Prupe.3G239200 Prunus persica HOM05D000189 ORTHO05D006628 1.0e-28 129.8 98 64.3
TPR.G32472 Trifolium pratense HOM05D000189 ORTHO05D006628 1.3e-28 129.4 100 63.0
MD07G1096100 Malus domestica HOM05D000189 ORTHO05D006628 2.3e-28 128.6 98 64.3
MD09G1085900 Malus domestica HOM05D000189 ORTHO05D006628 2.3e-28 128.6 98 64.3
Psat1g078920 Pisum sativum HOM05D000189 ORTHO05D006628 3.9e-28 127.9 100 61.0
Medtr0024s0070 Medicago truncatula HOM05D000189 ORTHO05D006628 5.1e-28 127.5 105 61.0
Phvul.004G064300 Phaseolus vulgaris HOM05D000189 ORTHO05D006628 5.1e-28 127.5 98 65.3
Glyma.19G046100 Glycine max HOM05D000189 ORTHO05D006628 8.6e-28 126.7 100 64.0
Thecc.04G136800 Theobroma cacao HOM05D000189 ORTHO05D006628 8.6e-28 126.7 100 62.0
MD17G1074800 Malus domestica HOM05D000189 ORTHO05D006628 1.5e-27 125.9 98 63.3
TWI74G1546 Tripterygium wilfordii HOM05D000189 ORTHO05D006628 1.9e-27 125.6 99 59.6
VMungo0464G0226 Vigna mungo HOM05D000189 ORTHO05D006628 1.9e-27 125.6 97 64.9
Gohir.A11G162700 Gossypium hirsutum HOM05D000189 ORTHO05D006628 7.3e-27 123.6 100 61.0
Gohir.D11G168900 Gossypium hirsutum HOM05D000189 ORTHO05D006628 7.3e-27 123.6 100 61.0
Gorai.007G180500 Gossypium raimondii HOM05D000189 ORTHO05D006628 7.3e-27 123.6 100 61.0
TAR371G0089 Trochodendron aralioides HOM05D000189 ORTHO05D006628 7.3e-27 123.6 98 60.2
Lalb_Chr02g0158281 Lupinus albus HOM05D000189 ORTHO05D006628 1.6e-26 122.5 99 60.6
Lj2g0014953 Lotus japonicus HOM05D000189 ORTHO05D006628 2.1e-26 122.1 104 59.6
Potri.017G113200 Populus trichocarpa HOM05D000189 ORTHO05D006628 2.1e-26 122.1 100 60.0
Haze_14135 Corylus avellana HOM05D000189 ORTHO05D006628 2.8e-26 121.7 100 59.0
Ca_13738_v3 Cicer arietinum L. HOM05D000189 ORTHO05D006628 3.6e-26 121.3 103 57.3
DCAR_017208 Daucus carota HOM05D000189 ORTHO05D006628 3.6e-26 121.3 97 60.8
Eucgr.J01476 Eucalyptus grandis HOM05D000189 ORTHO05D006628 3.6e-26 121.3 100 60.0
vmacro05570 Vaccinium macrocarpon HOM05D000189 ORTHO05D006628 3.6e-26 121.3 100 58.0
QL02p051539 Quercus lobata HOM05D000189 ORTHO05D006628 4.7e-26 120.9 99 59.6
Rhsim10G0063200 Rhododendron simsii HOM05D000189 ORTHO05D006628 4.7e-26 120.9 100 59.0
Ciclev10011926m.g Citrus clementina HOM05D000189 ORTHO05D006628 8.1e-26 120.2 100 61.0
Dinv33930 Davidia involucrata HOM05D000189 ORTHO05D006628 8.1e-26 120.2 99 59.6
TWI74G0720 Tripterygium wilfordii HOM05D000189 ORTHO05D006628 1.1e-25 119.8 99 56.6
PGR042G3999 Punica granatum HOM05D000189 ORTHO05D006628 1.4e-25 119.4 95 63.2
Cfa007941 Carpinus fangiana HOM05D000189 ORTHO05D006628 1.8e-25 119.0 100 57.0
Nn3g17776 Nelumbo nucifera HOM05D000189 ORTHO05D006628 2.3e-25 118.6 99 58.6
Actinidia36311 Actinidia chinensis HOM05D000189 ORTHO05D006628 3.1e-25 118.2 100 58.0
Lj2A446T44 Lonicera japonica HOM05D000189 ORTHO05D006628 3.1e-25 118.2 99 58.6
Oeu030781.1 Olea europaea HOM05D000189 ORTHO05D006628 4.0e-25 117.9 100 58.0
BolC9t58945H Brassica oleracea HOM05D000189 ORTHO05D006628 5.2e-25 117.5 102 55.9
Hma1.2p1_0136F.1_g062140 Hydrangea macrophylla HOM05D000189 ORTHO05D006628 5.2e-25 117.5 100 58.0
arahy.Tifrunner.gnm1.ann1.H2M9W7 Arachis hypogaea HOM05D000189 ORTHO05D006628 6.8e-25 117.1 100 57.0
BcaB08g36882 Brassica carinata HOM05D000189 ORTHO05D006628 6.8e-25 117.1 102 55.9
A10p23010 Brassica napus HOM05D000189 ORTHO05D006628 6.8e-25 117.1 102 54.9
BraA10t44370Z Brassica rapa HOM05D000189 ORTHO05D006628 6.8e-25 117.1 102 54.9
Cpa.g.sc179.18 Carica papaya HOM05D000189 ORTHO05D006628 6.8e-25 117.1 98 60.2
CSS0021672 Camellia sinensis var. sinensis HOM05D000189 ORTHO05D006628 8.9e-25 116.7 99 58.6
CSS0046451 Camellia sinensis var. sinensis HOM05D000189 ORTHO05D006628 8.9e-25 116.7 99 58.6
Cc07_g08940 Coffea canephora HOM05D000189 ORTHO05D006628 8.9e-25 116.7 100 57.0
ECA238G3704 Erigeron canadensis HOM05D000189 ORTHO05D006628 8.9e-25 116.7 103 57.3
AL6G26920 Arabidopsis lyrata HOM05D000189 ORTHO05D006628 1.2e-24 116.3 102 56.9
AT5G16040 Arabidopsis thaliana HOM05D000189 ORTHO05D006628 1.5e-24 115.9 102 56.9
HanXRQChr14g0440981 Helianthus annuus HOM05D000189 ORTHO05D006628 2.0e-24 115.5 103 58.3
Sc11g0008230 Simmondsia chinensis HOM05D000189 ORTHO05D006628 2.0e-24 115.5 104 57.7
Os08g0430700 Oryza sativa ssp. japonica HOM05D000189 ORTHO05D006628 2.6e-24 115.2 99 55.6
Sabra04G0078500 Salix brachista HOM05D000189 ORTHO05D006628 2.6e-24 115.2 97 56.7
GSVIVG01031071001 Vitis vinifera HOM05D000189 ORTHO05D006628 2.6e-24 115.2 99 58.6
arahy.Tifrunner.gnm1.ann1.50M490 Arachis hypogaea HOM05D000189 ORTHO05D006628 3.4e-24 114.8 107 53.3
Nitab4.5_0002288g0060 Nicotiana tabacum HOM05D000189 ORTHO05D006628 3.4e-24 114.8 97 56.7
Nitab4.5_0004118g0130 Nicotiana tabacum HOM05D000189 ORTHO05D006628 3.4e-24 114.8 97 56.7
BcaC04g18913 Brassica carinata HOM05D000189 ORTHO05D006628 4.4e-24 114.4 102 54.9
C09p60980 Brassica napus HOM05D000189 ORTHO05D006628 4.4e-24 114.4 102 54.9
Sed0002805 Sechium edule HOM05D000189 ORTHO05D006628 4.4e-24 114.4 98 56.1
BNapus_Darmor_BZH_scaffold_99p00030 Brassica napus HOM05D000189 ORTHO05D006628 7.5e-24 113.6 102 55.9
CsaV3_5G039170 Cucumis sativus L. HOM05D000189 ORTHO05D006628 9.9e-24 113.2 98 56.1
AL3G11870 Arabidopsis lyrata HOM05D000189 ORTHO05D006628 1.3e-23 112.8 102 56.9
Thhalv10013742m.g Eutrema salsugineum HOM05D000189 ORTHO05D006628 1.3e-23 112.8 101 54.5
Sp3g01540 Schrenkiella parvula HOM05D000189 ORTHO05D006628 1.3e-23 112.8 102 55.9
SGA_v2.0_scaffold33G13475 Striga asiatica HOM05D000189 ORTHO05D006628 1.3e-23 112.8 100 55.0
MSTRG.23563 Avicennia marina HOM05D000189 ORTHO05D006628 2.2e-23 112.1 102 52.9
Potri.004G101800 Populus trichocarpa HOM05D000189 ORTHO05D006628 2.2e-23 112.1 94 58.5
Aqoxy3G03932 Aquilegia oxysepala HOM05D000189 ORTHO05D006628 3.7e-23 111.3 99 55.6
CANSAT64G0905 Cannabis sativa HOM05D000189 ORTHO05D006628 3.7e-23 111.3 99 59.6
Nn4g23772 Nelumbo nucifera HOM05D000189 ORTHO05D006628 3.7e-23 111.3 97 59.8
Hund13729 Selenicereus undatus HOM05D000189 ORTHO05D006628 3.7e-23 111.3 100 57.0
CARHR076510 Cardamine hirsuta HOM05D000189 ORTHO05D006628 4.9e-23 110.9 102 57.8
Sp6g28090 Schrenkiella parvula HOM05D000189 ORTHO05D006628 6.4e-23 110.5 102 53.9
Atru.chr8.861 Acer truncatum HOM05D000189 ORTHO05D006628 8.3e-23 110.2 99 56.6
BNapus_Darmor_BZH_scaffold_122p00020 Brassica napus HOM05D000189 ORTHO05D006628 8.3e-23 110.2 102 54.9
Peaxi162Scf01327g00132 Petunia axillaris HOM05D000189 ORTHO05D006628 8.3e-23 110.2 94 56.4
Solyc02g085780.3 Solanum lycopersicum HOM05D000189 ORTHO05D006628 8.3e-23 110.2 99 53.5
Ah.16g101890 Amaranthus hybridus HOM05D000298 ORTHO05D006628 1.1e-22 109.8 100 56.0
BolC1t05899H Brassica oleracea HOM05D000189 ORTHO05D006628 1.1e-22 109.8 103 52.4
HPP92_026956 Vanilla planifolia HOM05D000189 ORTHO05D006628 1.1e-22 109.8 97 56.7
BcaC09g47706 Brassica carinata HOM05D000189 ORTHO05D006628 1.4e-22 109.4 103 53.4
Carub.0006s1423 Capsella rubella HOM05D000189 ORTHO05D006628 1.9e-22 109.0 102 54.9
EL10Ac2g04596 Beta vulgaris HOM05D000189 ORTHO05D006628 2.4e-22 108.6 109 52.3
MELO3C022092.2 Cucumis melo HOM05D000189 ORTHO05D006628 3.2e-22 108.2 98 54.1
Sed0006396 Sechium edule HOM05D000189 ORTHO05D006628 3.2e-22 108.2 98 55.1
ATR0097G025 Amborella trichopoda HOM05D000189 ORTHO05D006628 4.1e-22 107.8 98 58.2
Sopen02g030470 Solanum pennellii HOM05D000189 ORTHO05D006628 5.4e-22 107.5 99 53.5
COL.COLO4_16185 Corchorus olitorius HOM05D000189 ORTHO05D006628 7.1e-22 107.1 124 48.4
Lsat_1_v5_gn_2_79660 Lactuca sativa HOM05D000189 ORTHO05D006628 9.2e-22 106.7 98 57.1
THA.LOC104820953 Tarenaya hassleriana HOM05D000189 ORTHO05D006628 9.2e-22 106.7 100 52.0
CARHR197270 Cardamine hirsuta HOM05D000189 ORTHO05D006628 1.2e-21 106.3 103 51.5
Manes.02G067100 Manihot esculenta HOM05D000189 ORTHO05D006628 1.2e-21 106.3 67 68.7
Aa31LG11G13570 Aethionema arabicum HOM05D000189 ORTHO05D006628 1.6e-21 105.9 101 52.5
Dinv34843 Davidia involucrata HOM05D000189 ORTHO05D006628 1.6e-21 105.9 97 54.6
Medtr0024s0160 Medicago truncatula HOM05D000189 ORTHO05D006628 2.1e-21 105.5 104 53.8
CDE05G3347 Ceratophyllum demersum HOM05D000189 ORTHO05D006628 2.7e-21 105.1 99 52.5
CAN.G358.140 Capsicum annuum HOM05D000189 ORTHO05D006628 3.5e-21 104.8 103 51.5
Carub.0003s0162 Capsella rubella HOM05D000189 ORTHO05D006628 4.6e-21 104.4 103 52.4
Zm00001eb179510 Zea mays HOM05D000189 ORTHO05D006628 4.6e-21 104.4 94 56.4
unitig_60.g25410 Utricularia gibba HOM05D000189 ORTHO05D006628 6.0e-21 104.0 96 53.1
PGSC0003DMG401012656 Solanum tuberosum HOM05D000189 ORTHO05D006628 7.8e-21 103.6 101 54.5
SalBow3G2679 Salvia bowleyana HOM05D000189 ORTHO05D006628 3.9e-20 101.3 98 51.0
CDE05G0975 Ceratophyllum demersum HOM05D000298 ORTHO05D006628 1.5e-19 99.4 97 50.5
Aa31LG5G13010 Aethionema arabicum HOM05D000189 ORTHO05D006628 3.3e-19 98.2 102 51.0
PSO063G6465 Papaver somniferum HOM05D000189 ORTHO05D006628 3.3e-19 98.2 112 49.1
AUR62008975 Chenopodium quinoa HOM05D000189 ORTHO05D006628 6.2e-18 94.0 81 59.3
ClCG11G005390 Citrullus lanatus HOM05D000189 ORTHO05D006628 8.1e-18 93.6 63 65.1
SMO271G0115 Selaginella moellendorffii HOM05D000189 ORTHO05D006628 5.2e-17 90.9 97 50.5
PSO782G3998 Papaver somniferum HOM05D000189 ORTHO05D006628 1.2e-16 89.7 107 47.7
AUR62014530 Chenopodium quinoa HOM05D000189 ORTHO05D006628 2.2e-15 85.5 76 60.5
MBI17_g42621_MAGBIO Magnolia biondii HOM05D000189 ORTHO05D006628 2.2e-15 85.5 97 50.5
Rhsim10G0062700 Rhododendron simsii HOM05D000189 ORTHO05D006628 2.4e-14 82.0 81 51.9
Mapoly0030s0128 Marchantia polymorpha HOM05D000189 ORTHO05D006628 9.6e-11 70.1 120 35.8
SHI28229 Sapria himalayana HOM05D000189 ORTHO05D006628 1.5e-08 62.8 57 56.1
CBR_g30780 Chara braunii HOM05D000189 ORTHO05D006628 9.3e-06 53.5 101 34.7


User provided reference genes

Program Settings