Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G2429 Fragaria x ananassa HOM05D004646 ORTHO05D005829 1.4e-114 416.4 217 100.0
FAN17G1446 Fragaria x ananassa HOM05D004646 ORTHO05D005829 7.5e-113 410.6 217 98.6
FAN04G0237 Fragaria x ananassa HOM05D004646 ORTHO05D005829 1.2e-102 376.7 197 99.5
FAN21G2061 Fragaria x ananassa HOM05D004646 ORTHO05D005829 4.0e-82 308.5 196 83.2
FAN12G3236 Fragaria x ananassa HOM05D004646 ORTHO05D005829 5.2e-82 308.1 223 74.9
FAN17G1826 Fragaria x ananassa HOM05D004646 ORTHO05D005829 4.7e-67 258.5 133 96.2
FAN07G2721 Fragaria x ananassa HOM05D004646 ORTHO05D005829 8.1e-67 257.7 133 96.2
FvH4_4g31430 Fragaria vesca HOM05D004646 ORTHO05D005829 3.1e-66 255.8 133 95.5
FAN12G2979 Fragaria x ananassa HOM05D004646 ORTHO05D005829 3.1e-66 255.8 133 95.5
FAN23G2906 Fragaria x ananassa HOM05D004646 ORTHO05D005829 2.1e-62 243.0 133 92.5
RcHm_v2.0_Chr4g0439911 Rosa chinensis HOM05D004646 ORTHO05D005829 2.2e-56 223.0 135 83.7
FAN09G3389 Fragaria x ananassa HOM05D004646 ORTHO05D005829 1.8e-37 160.2 79 97.5
MD13G1072600 Malus domestica HOM05D004646 ORTHO05D005829 5.3e-34 148.7 148 60.1
Prupe.1G273600 Prunus persica HOM05D004646 ORTHO05D005829 9.0e-34 147.9 151 57.0
MD16G1073400 Malus domestica HOM05D004646 ORTHO05D005829 2.5e-31 139.8 148 56.1
CSS0046070 Camellia sinensis var. sinensis HOM05D004646 ORTHO05D005829 9.6e-28 127.9 158 50.6
Haze_12017 Corylus avellana HOM05D004646 ORTHO05D005829 2.6e-25 119.8 134 54.5
Dinv16641 Davidia involucrata HOM05D004646 ORTHO05D005829 2.6e-25 119.8 157 49.7
Cfa008987 Carpinus fangiana HOM05D004646 ORTHO05D005829 1.0e-24 117.9 134 55.2
CiPaw.05G135800 Carya illinoinensis HOM05D004646 ORTHO05D005829 1.9e-23 113.6 142 52.1
Gohir.A04G147800 Gossypium hirsutum HOM05D004646 ORTHO05D005829 1.9e-23 113.6 144 52.1
Hma1.2p1_0795F.1_g218775 Hydrangea macrophylla HOM05D004646 ORTHO05D005829 1.9e-23 113.6 148 46.6
Gohir.D04G192100 Gossypium hirsutum HOM05D004646 ORTHO05D005829 5.5e-23 112.1 143 51.7
Gorai.012G187500 Gossypium raimondii HOM05D004646 ORTHO05D005829 5.5e-23 112.1 144 51.4
ClCG05G024330 Citrullus lanatus HOM05D004646 ORTHO05D005829 7.2e-23 111.7 84 63.1
Actinidia31896 Actinidia chinensis HOM05D004646 ORTHO05D005829 1.2e-22 110.9 153 49.7
CsaV3_5G032630 Cucumis sativus L. HOM05D004646 ORTHO05D005829 1.6e-22 110.5 143 48.3
Thecc.02G347000 Theobroma cacao HOM05D004646 ORTHO05D005829 1.6e-22 110.5 142 49.3
MELO3C012090.2 Cucumis melo HOM05D004646 ORTHO05D005829 2.1e-22 110.2 143 48.3
Lalb_Chr09g0329301 Lupinus albus HOM05D004646 ORTHO05D005829 2.1e-22 110.2 148 48.0
Atru.chr11.1794 Acer truncatum HOM05D004646 ORTHO05D005829 1.3e-21 107.5 142 50.7
Manes.05G100900 Manihot esculenta HOM05D004646 ORTHO05D005829 1.8e-21 107.1 146 45.9
TAR371G0666 Trochodendron aralioides HOM05D004646 ORTHO05D005829 1.8e-21 107.1 159 44.0
COL.COLO4_23008 Corchorus olitorius HOM05D004646 ORTHO05D005829 3.0e-21 106.3 137 48.9
Lj4g0000065 Lotus japonicus HOM05D004646 ORTHO05D005829 5.1e-21 105.5 126 50.8
Nn3g17224 Nelumbo nucifera HOM05D004646 ORTHO05D005829 5.1e-21 105.5 159 44.0
QL03p063033 Quercus lobata HOM05D004646 ORTHO05D005829 8.7e-21 104.8 93 62.4
QL03p064307 Quercus lobata HOM05D004646 ORTHO05D005829 8.7e-21 104.8 93 62.4
Eucgr.B03438 Eucalyptus grandis HOM05D004646 ORTHO05D005829 1.1e-20 104.4 145 47.6
AUR62005771 Chenopodium quinoa HOM05D004646 ORTHO05D005829 1.5e-20 104.0 123 52.0
CANSAT64G1881 Cannabis sativa HOM05D004646 ORTHO05D005829 1.9e-20 103.6 151 47.7
PGR102G1495 Punica granatum HOM05D004646 ORTHO05D005829 1.9e-20 103.6 141 47.5
Potri.008G147600 Populus trichocarpa HOM05D004646 ORTHO05D005829 4.3e-20 102.4 139 46.8
Sed0009585 Sechium edule HOM05D004646 ORTHO05D005829 4.3e-20 102.4 144 46.5
GSVIVG01019995001 Vitis vinifera HOM05D004646 ORTHO05D005829 4.3e-20 102.4 145 49.7
Phvul.L004046 Phaseolus vulgaris HOM05D004646 ORTHO05D005829 7.4e-20 101.7 139 48.2
AUR62028786 Chenopodium quinoa HOM05D004646 ORTHO05D005829 9.7e-20 101.3 91 59.3
Sabra08G0112200 Salix brachista HOM05D004646 ORTHO05D005829 9.7e-20 101.3 142 43.7
Psat4g134400 Pisum sativum HOM05D004646 ORTHO05D005829 1.3e-19 100.9 130 48.5
Phvul.011G179800 Phaseolus vulgaris HOM05D004646 ORTHO05D005829 1.6e-19 100.5 145 46.9
A06p10240 Brassica napus HOM05D004646 ORTHO05D005829 2.2e-19 100.1 74 68.9
BraA06t24207Z Brassica rapa HOM05D004646 ORTHO05D005829 2.2e-19 100.1 74 68.9
Migut.L01300 Erythranthe guttata HOM05D004646 ORTHO05D005829 2.8e-19 99.8 99 54.5
MSTRG.7804 Avicennia marina HOM05D004646 ORTHO05D005829 3.7e-19 99.4 147 43.5
Lsat_1_v5_gn_8_53300 Lactuca sativa HOM05D004646 ORTHO05D005829 3.7e-19 99.4 160 42.5
VMungo1127G0944 Vigna mungo HOM05D004646 ORTHO05D005829 3.7e-19 99.4 138 46.4
Duzib251G0705 Durio zibethinus HOM05D004646 ORTHO05D005829 4.8e-19 99.0 134 50.0
Lalb_Chr05g0220381 Lupinus albus HOM05D004646 ORTHO05D005829 4.8e-19 99.0 144 45.8
Medtr8g467540 Medicago truncatula HOM05D004646 ORTHO05D005829 4.8e-19 99.0 127 48.0
ATR0564G518 Amborella trichopoda HOM05D004646 ORTHO05D005829 1.1e-18 97.8 109 48.6
arahy.Tifrunner.gnm1.ann1.33WNW9 Arachis hypogaea HOM05D004646 ORTHO05D005829 1.1e-18 97.8 151 42.4
Ciclev10032082m.g Citrus clementina HOM05D004646 ORTHO05D005829 1.1e-18 97.8 77 62.3
FAN15G2962 Fragaria x ananassa HOM05D004646 ORTHO05D206740 1.1e-18 97.8 53 86.8
PGSC0003DMG400031270 Solanum tuberosum HOM05D004646 ORTHO05D005829 1.1e-18 97.8 141 45.4
C05p12020 Brassica napus HOM05D004646 ORTHO05D005829 1.8e-18 97.1 77 64.9
CAN.G58.23 Capsicum annuum HOM05D004646 ORTHO05D005829 1.8e-18 97.1 141 44.0
Thhalv10008130m.g Eutrema salsugineum HOM05D004646 ORTHO05D005829 2.4e-18 96.7 81 60.5
BolC5t29957H Brassica oleracea HOM05D004646 ORTHO05D005829 3.1e-18 96.3 77 64.9
Cc11_g13050 Coffea canephora HOM05D004646 ORTHO05D005829 4.1e-18 95.9 117 51.3
Oeu055120.1 Olea europaea HOM05D004646 ORTHO05D005829 4.1e-18 95.9 142 45.1
DCAR_027410 Daucus carota HOM05D004646 ORTHO05D005829 5.3e-18 95.5 138 47.1
Peaxi162Scf00541g00118 Petunia axillaris HOM05D004646 ORTHO05D005829 5.3e-18 95.5 131 46.6
arahy.Tifrunner.gnm1.ann1.K6CIAB Arachis hypogaea HOM05D004646 ORTHO05D005829 9.1e-18 94.7 119 48.7
ECA233G2883 Erigeron canadensis HOM05D004646 ORTHO05D005829 9.1e-18 94.7 74 66.2
PSO832G2587 Papaver somniferum HOM05D004646 ORTHO05D005829 9.1e-18 94.7 106 50.0
arahy.Tifrunner.gnm1.ann1.9WQ92K Arachis hypogaea HOM05D004646 ORTHO05D005829 1.2e-17 94.4 119 48.7
PSO063G0788 Papaver somniferum HOM05D004646 ORTHO05D005829 2.0e-17 93.6 106 50.0
SalBow2G3250 Salvia bowleyana HOM05D004646 ORTHO05D005829 2.0e-17 93.6 75 62.7
Aa31LG1G790 Aethionema arabicum HOM05D004646 ORTHO05D005829 2.6e-17 93.2 84 59.5
THA.LOC104801795 Tarenaya hassleriana HOM05D004646 ORTHO05D005829 2.6e-17 93.2 93 54.8
Nn4g23150 Nelumbo nucifera HOM05D004646 ORTHO05D005829 4.5e-17 92.4 91 53.8
Hund25246 Selenicereus undatus HOM05D004646 ORTHO05D005829 4.5e-17 92.4 84 59.5
Glyma.08G300800 Glycine max HOM05D004646 ORTHO05D005829 7.7e-17 91.7 79 59.5
Solyc05g007500.4 Solanum lycopersicum HOM05D004646 ORTHO05D005829 7.7e-17 91.7 140 44.3
Rhsim12G0063600 Rhododendron simsii HOM05D004646 ORTHO05D005829 1.0e-16 91.3 133 47.4
HanXRQChr12g0362151 Helianthus annuus HOM05D004646 ORTHO05D005829 1.3e-16 90.9 160 43.8
Sc14g0008260 Simmondsia chinensis HOM05D004646 ORTHO05D005829 1.3e-16 90.9 83 57.8
EL10Ac6g13196 Beta vulgaris HOM05D004646 ORTHO05D005829 1.7e-16 90.5 83 57.8
CARHR014690 Cardamine hirsuta HOM05D004646 ORTHO05D005829 1.7e-16 90.5 79 60.8
TPR.G31818 Trifolium pratense HOM05D004646 ORTHO05D005829 1.7e-16 90.5 133 45.9
unitig_747.g21177 Utricularia gibba HOM05D004646 ORTHO05D005829 1.7e-16 90.5 78 59.0
Sopen05g003380 Solanum pennellii HOM05D004646 ORTHO05D005829 2.2e-16 90.1 140 43.6
Aqoxy3G03371 Aquilegia oxysepala HOM05D004646 ORTHO05D005829 2.9e-16 89.7 140 40.7
Glyma.18G119400 Glycine max HOM05D004646 ORTHO05D005829 2.9e-16 89.7 138 44.9
Hund05883 Selenicereus undatus HOM05D004646 ORTHO05D005829 2.9e-16 89.7 77 58.4
A08p32030 Brassica napus HOM05D004646 ORTHO05D005829 3.8e-16 89.4 84 57.1
Sp1g12620 Schrenkiella parvula HOM05D004646 ORTHO05D005829 5.0e-16 89.0 84 56.0
SGA_v2.0_scaffold53G19364 Striga asiatica HOM05D004646 ORTHO05D005829 6.5e-16 88.6 79 60.8
BcaB03g13106 Brassica carinata HOM05D004646 ORTHO05D005829 1.4e-15 87.4 79 57.0
HPP92_027580 Vanilla planifolia HOM05D004646 ORTHO05D005829 3.2e-15 86.3 73 57.5
vmacro01257 Vaccinium macrocarpon HOM05D004646 ORTHO05D005829 7.2e-15 85.1 75 57.3
Zm00001eb312490 Zea mays HOM05D004646 ORTHO05D005829 7.2e-15 85.1 84 48.8
BcaC07g38729 Brassica carinata HOM05D004646 ORTHO05D005829 9.4e-15 84.7 140 42.1
C08p16560 Brassica napus HOM05D004646 ORTHO05D005829 9.4e-15 84.7 140 42.1
BolC8t49284H Brassica oleracea HOM05D004646 ORTHO05D005829 9.4e-15 84.7 140 42.1
CDE09G0693 Ceratophyllum demersum HOM05D004646 ORTHO05D005829 9.4e-15 84.7 71 57.7
AT1G14270 Arabidopsis thaliana HOM05D004646 ORTHO05D005829 1.2e-14 84.3 84 53.6
BraA08t35124Z Brassica rapa HOM05D004646 ORTHO05D005829 2.1e-14 83.6 138 42.0
VMungo0251G2645 Vigna mungo HOM05D004646 ORTHO05D005829 3.6e-14 82.8 87 56.3
Carub.0001s1395 Capsella rubella HOM05D004646 ORTHO05D005829 4.6e-14 82.4 136 39.7
AL1G26150 Arabidopsis lyrata HOM05D004646 ORTHO05D005829 6.1e-14 82.0 84 52.4
Nitab4.5_0001503g0160 Nicotiana tabacum HOM05D004646 ORTHO05D005829 1.0e-13 81.3 154 40.9
QL03p063041 Quercus lobata HOM05D004646 ORTHO05D005829 3.9e-13 79.3 110 40.9
QL03p064300 Quercus lobata HOM05D004646 ORTHO05D005829 3.9e-13 79.3 110 40.9
Lj2g0013736 Lotus japonicus HOM05D004646 ORTHO05D005829 6.7e-13 78.6 133 39.1
Zm00001eb041360 Zea mays HOM05D004646 ORTHO05D005829 1.1e-12 77.8 93 40.9
arahy.Tifrunner.gnm1.ann1.J8CRVY Arachis hypogaea HOM05D004646 ORTHO05D005829 2.6e-12 76.6 146 38.4
Migut.L01299 Erythranthe guttata HOM05D004646 ORTHO05D005829 7.4e-12 75.1 105 41.9
FAN15G0706 Fragaria x ananassa HOM05D000145 ORTHO05D000115 2.0e-09 67.0 37 91.9
FAN22G0666 Fragaria x ananassa HOM05D004646 ORTHO05D005829 2.6e-09 66.6 36 94.4
Migut.L01298 Erythranthe guttata HOM05D004646 ORTHO05D005829 3.4e-09 66.2 91 46.2
MBI05_g08286_MAGBIO Magnolia biondii HOM05D004646 ORTHO05D005829 2.2e-08 63.5 155 35.5
Nitab4.5_0011071g0010 Nicotiana tabacum HOM05D004646 ORTHO05D005829 6.5e-08 62.0 101 45.5
Mapoly0033s0092 Marchantia polymorpha HOM05D004646 ORTHO05D005829 2.7e-06 56.6 63 44.4
Os09g0413200 Oryza sativa ssp. japonica HOM05D004646 ORTHO05D005829 6.1e-06 55.5 48 52.1


User provided reference genes

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