Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G2404 Fragaria x ananassa HOM05D000187 ORTHO05D029505 6.4e-84 313.9 146 100.0
FAN01G2937 Fragaria x ananassa HOM05D010776 ORTHO05D000926 1.9e-32 142.9 75 89.3
FAN10G0322 Fragaria x ananassa HOM05D000187 ORTHO05D029505 7.7e-29 131.0 65 92.3
FAN14G5887 Fragaria x ananassa HOM05D000187 ORTHO05D029505 5.0e-28 128.3 65 90.8
FAN10G2495 Fragaria x ananassa HOM05D000187 ORTHO05D000926 9.4e-19 97.4 58 81.0
FAN06G3817 Fragaria x ananassa HOM05D000187 ORTHO05D000926 1.2e-18 97.1 58 81.0
FvH4_3g06890 Fragaria vesca HOM05D000187 ORTHO05D029505 4.7e-18 95.1 52 84.6
FvH4_7g00970 Fragaria vesca HOM05D000187 ORTHO05D000926 4.7e-18 95.1 48 89.6
RcHm_v2.0_Chr1g0315871 Rosa chinensis HOM05D000187 ORTHO05D000926 7.4e-16 87.8 48 81.2
Prupe.2G012300 Prunus persica HOM05D000187 ORTHO05D000926 1.2e-13 80.5 48 72.9
CANSAT80G2426 Cannabis sativa HOM05D000187 ORTHO05D000926 2.0e-13 79.7 59 69.5
QL04p007020 Quercus lobata HOM05D000187 ORTHO05D000926 2.0e-13 79.7 58 63.8
QL04p007307 Quercus lobata HOM05D000187 ORTHO05D000926 2.0e-13 79.7 58 63.8
CiPaw.13G004000 Carya illinoinensis HOM05D000187 ORTHO05D000926 3.5e-13 79.0 58 63.8
MD07G1009300 Malus domestica HOM05D000187 ORTHO05D000926 3.5e-13 79.0 48 75.0
Manes.10G143800 Manihot esculenta HOM05D000187 ORTHO05D000926 4.5e-13 78.6 48 72.9
Atru.chr11.2655 Acer truncatum HOM05D000187 ORTHO05D000926 1.0e-12 77.4 58 62.1
Thecc.01G411600 Theobroma cacao HOM05D000187 ORTHO05D000926 1.0e-12 77.4 48 72.9
Duzib138G0898 Durio zibethinus HOM05D000187 ORTHO05D000926 1.7e-12 76.6 60 65.0
Duzib268G1602 Durio zibethinus HOM05D000187 ORTHO05D000926 2.9e-12 75.9 48 75.0
Sabra09G0045900 Salix brachista HOM05D000187 ORTHO05D000926 5.0e-12 75.1 48 68.8
Dinv09360 Davidia involucrata HOM05D000187 ORTHO05D000926 6.5e-12 74.7 48 68.8
Potri.009G062100 Populus trichocarpa HOM05D000187 ORTHO05D000926 6.5e-12 74.7 48 68.8
MD02G1313100 Malus domestica HOM05D000187 ORTHO05D000926 1.5e-11 73.6 48 66.7
GSVIVG01032082001 Vitis vinifera HOM05D000187 ORTHO05D000926 2.5e-11 72.8 58 58.6
Potri.001G267700 Populus trichocarpa HOM05D000187 ORTHO05D000926 5.5e-11 71.6 48 66.7
Ciclev10032570m.g Citrus clementina HOM05D000187 ORTHO05D000926 1.8e-09 66.6 58 55.2
ECA248G3044 Erigeron canadensis HOM05D000187 ORTHO05D000926 2.3e-09 66.2 47 59.6
TAR623G0699 Trochodendron aralioides HOM05D000187 ORTHO05D000926 3.0e-09 65.9 63 49.2
TAR623G1086 Trochodendron aralioides HOM05D000187 ORTHO05D000926 3.0e-09 65.9 63 49.2
Dinv43450 Davidia involucrata HOM05D000187 ORTHO05D000926 6.7e-09 64.7 42 69.0
Lj7C570G5 Lonicera japonica HOM05D000187 ORTHO05D000926 2.6e-08 62.8 60 50.0
TWI73G0757 Tripterygium wilfordii HOM05D000187 ORTHO05D000926 2.6e-08 62.8 48 62.5
Lsat_1_v5_gn_1_107200 Lactuca sativa HOM05D000187 ORTHO05D000926 3.3e-08 62.4 47 59.6
PGR031G0513 Punica granatum HOM05D000187 ORTHO05D000926 3.3e-08 62.4 58 53.4
Hma1.2p1_0293F.1_g116210 Hydrangea macrophylla HOM05D000187 ORTHO05D000926 5.7e-08 61.6 50 58.0
arahy.Tifrunner.gnm1.ann1.BBR3FV Arachis hypogaea HOM05D000187 ORTHO05D000926 9.7e-08 60.8 60 45.0
TAR633G1186 Trochodendron aralioides HOM05D000187 ORTHO05D000926 1.3e-07 60.5 60 46.7
Actinidia20670 Actinidia chinensis HOM05D000187 ORTHO05D000926 1.7e-07 60.1 48 54.2
arahy.Tifrunner.gnm1.ann1.AJX1BJ Arachis hypogaea HOM05D000187 ORTHO05D000926 1.7e-07 60.1 60 45.0
MBI01_g39017_MAGBIO Magnolia biondii HOM05D000187 ORTHO05D000926 2.2e-07 59.7 93 35.5
MBI04_g28754_MAGBIO Magnolia biondii HOM05D000187 ORTHO05D000926 2.2e-07 59.7 102 35.3
ClCG09G004210 Citrullus lanatus HOM05D000187 ORTHO05D000926 2.8e-07 59.3 60 55.0
TAR636G0766 Trochodendron aralioides HOM05D000187 ORTHO05D000926 3.7e-07 58.9 48 56.2
Os03g0173900 Oryza sativa ssp. japonica HOM05D000187 ORTHO05D000926 6.3e-07 58.2 49 55.1
Aa31LG10G17410 Aethionema arabicum HOM05D000187 ORTHO05D000926 8.2e-07 57.8 48 52.1
Glyma.13G203300 Glycine max HOM05D000187 ORTHO05D000926 1.1e-06 57.4 58 48.3
MELO3C023546.2 Cucumis melo HOM05D000187 ORTHO05D000926 1.4e-06 57.0 60 53.3
CsaV3_7G031110 Cucumis sativus L. HOM05D000187 ORTHO05D000926 1.4e-06 57.0 60 53.3
ATR0605G300 Amborella trichopoda HOM05D000187 ORTHO05D000926 1.8e-06 56.6 88 35.2
Phvul.011G213300 Phaseolus vulgaris HOM05D000187 ORTHO05D000926 1.8e-06 56.6 58 48.3
VMungo1127G0029 Vigna mungo HOM05D000187 ORTHO05D000926 2.4e-06 56.2 58 48.3
Medtr8g036640 Medicago truncatula HOM05D000187 ORTHO05D000926 3.1e-06 55.8 59 50.8
Medtr8g037150 Medicago truncatula HOM05D000187 ORTHO05D000926 3.1e-06 55.8 59 50.8
Rhsim01G0129800 Rhododendron simsii HOM05D000187 ORTHO05D000926 3.1e-06 55.8 48 45.8
HanXRQChr01g0016191 Helianthus annuus HOM05D000187 ORTHO05D000926 4.1e-06 55.5 43 51.2
Ca_23865_v3 Cicer arietinum L. HOM05D000187 ORTHO05D000926 5.3e-06 55.1 49 57.1
vmacro21183 Vaccinium macrocarpon HOM05D000187 ORTHO05D000926 5.3e-06 55.1 60 41.7
Cc02_g27840 Coffea canephora HOM05D000187 ORTHO05D000926 7.0e-06 54.7 61 50.8
TAR636G1650 Trochodendron aralioides HOM05D000187 ORTHO05D000926 7.0e-06 54.7 59 44.1
PSO339G4067 Papaver somniferum HOM05D000187 ORTHO05D000926 9.1e-06 54.3 45 53.3
PSO384G0187 Papaver somniferum HOM05D000187 ORTHO05D000926 9.1e-06 54.3 45 53.3
TPR.G1869 Trifolium pratense HOM05D000187 ORTHO05D000926 9.1e-06 54.3 59 49.2


User provided reference genes

Program Settings