Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G2383 Fragaria x ananassa HOM05D003671 ORTHO05D004285 0.0e+00 1584.7 883 100.0
FAN05G5788 Fragaria x ananassa HOM05D003671 ORTHO05D004285 0.0e+00 1531.5 883 90.0
FAN05G3119 Fragaria x ananassa HOM05D003671 ORTHO05D004285 0.0e+00 1530.0 883 89.9
FAN14G5445 Fragaria x ananassa HOM05D003671 ORTHO05D004285 0.0e+00 1526.5 883 93.7
FvH4_6g10170 Fragaria vesca HOM05D003671 ORTHO05D004285 0.0e+00 1525.0 883 93.4
FAN02G1273 Fragaria x ananassa HOM05D003671 ORTHO05D004285 0.0e+00 1473.8 883 94.5
RcHm_v2.0_Chr3g0460911 Rosa chinensis HOM05D003671 ORTHO05D004285 0.0e+00 1425.2 897 84.9
Prupe.6G290600 Prunus persica HOM05D003671 ORTHO05D004285 0.0e+00 1276.9 897 77.5
MD12G1185300 Malus domestica HOM05D003671 ORTHO05D004285 0.0e+00 1154.8 896 71.9
MD04G1172000 Malus domestica HOM05D003671 ORTHO05D004285 0.0e+00 1151.7 892 75.2
Cfa017060 Carpinus fangiana HOM05D003671 ORTHO05D004285 0.0e+00 1076.6 897 69.8
Thecc.04G154700 Theobroma cacao HOM05D003671 ORTHO05D004285 6.0e-312 1073.5 905 68.4
Manes.09G115800 Manihot esculenta HOM05D003671 ORTHO05D004285 1.8e-311 1072.4 904 66.2
COL.COLO4_30007 Corchorus olitorius HOM05D003671 ORTHO05D004285 1.3e-309 1066.2 904 69.8
Duzib151G0206 Durio zibethinus HOM05D003671 ORTHO05D004285 3.3e-308 1061.6 904 67.8
Manes.09G116100 Manihot esculenta HOM05D003671 ORTHO05D004285 3.1e-306 1055.0 904 64.2
Atru.chr8.2376 Acer truncatum HOM05D003671 ORTHO05D004285 1.2e-305 1053.1 899 68.1
Ciclev10011037m.g Citrus clementina HOM05D003671 ORTHO05D004285 1.2e-305 1053.1 910 64.2
Duzib212G0018 Durio zibethinus HOM05D003671 ORTHO05D004285 1.9e-300 1035.8 904 65.3
Dinv25318 Davidia involucrata HOM05D003671 ORTHO05D004285 3.3e-292 1008.4 907 64.2
QL07p032733 Quercus lobata HOM05D003671 ORTHO05D004285 1.1e-290 1003.4 861 67.2
Potri.006G107500 Populus trichocarpa HOM05D003671 ORTHO05D004285 1.8e-290 1002.7 907 63.6
CiPaw.10G164200 Carya illinoinensis HOM05D003671 ORTHO05D004285 1.7e-288 996.1 857 66.5
TWI77G0322 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 2.5e-284 982.2 894 62.1
CANSAT35G0504 Cannabis sativa HOM05D003671 ORTHO05D004285 4.3e-284 981.5 901 65.0
CSS0036424 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 5.6e-284 981.1 910 62.1
CSS0037141 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 2.1e-283 979.2 910 61.9
TWI74G1343 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 4.8e-283 978.0 900 63.8
Sabra04G0151200 Salix brachista HOM05D003671 ORTHO05D004285 4.5e-281 971.5 906 63.8
Sabra06G0083600 Salix brachista HOM05D003671 ORTHO05D004285 7.6e-281 970.7 907 61.6
Hma1.2p1_1052F.1_g252340 Hydrangea macrophylla HOM05D003671 ORTHO05D004285 2.4e-279 965.7 907 62.2
Gorai.005G122800 Gossypium raimondii HOM05D003671 ORTHO05D004285 6.7e-277 957.6 884 60.4
CsaV3_3G033210 Cucumis sativus L. HOM05D003671 ORTHO05D004285 7.4e-276 954.1 915 61.2
Sed0011007 Sechium edule HOM05D003671 ORTHO05D004285 7.4e-276 954.1 915 62.0
Potri.016G133700 Populus trichocarpa HOM05D003671 ORTHO05D004285 1.6e-275 953.0 907 62.8
Eucgr.K01274 Eucalyptus grandis HOM05D003671 ORTHO05D004285 3.7e-275 951.8 892 61.0
MELO3C009114.2 Cucumis melo HOM05D003671 ORTHO05D004285 4.8e-275 951.4 915 61.1
CSS0031435 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 1.4e-274 949.9 906 60.2
Cpa.g.sc86.30 Carica papaya HOM05D003671 ORTHO05D004285 3.1e-274 948.7 807 67.5
Glyma.18G211200 Glycine max HOM05D003671 ORTHO05D004285 5.3e-274 948.0 901 61.4
CSS0025205 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 6.9e-274 947.6 906 60.0
Actinidia29047 Actinidia chinensis HOM05D003671 ORTHO05D004285 2.6e-273 945.7 906 61.7
ClCG10G022620 Citrullus lanatus HOM05D003671 ORTHO05D004285 2.2e-272 942.6 915 61.9
Glyma.18G212400 Glycine max HOM05D003671 ORTHO05D004285 8.4e-272 940.6 901 64.2
Rhsim05G0229100 Rhododendron simsii HOM05D003671 ORTHO05D004285 8.4e-272 940.6 915 59.6
Phvul.008G084500 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 1.4e-271 939.9 900 64.7
Glyma.09G277700 Glycine max HOM05D003671 ORTHO05D004285 3.2e-271 938.7 902 60.9
Gorai.005G122900 Gossypium raimondii HOM05D003671 ORTHO05D004285 5.5e-271 937.9 887 63.8
Lalb_Chr19g0124051 Lupinus albus HOM05D003671 ORTHO05D004285 5.5e-271 937.9 896 62.5
Haze_21142 Corylus avellana HOM05D003671 ORTHO05D004285 9.3e-271 937.2 793 68.0
Haze_21147 Corylus avellana HOM05D003671 ORTHO05D004285 9.3e-271 937.2 793 68.0
Gohir.D02G108300 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.6e-270 936.4 887 63.6
Phvul.008G084400 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 1.0e-269 933.7 900 64.4
Actinidia11522 Actinidia chinensis HOM05D003671 ORTHO05D004285 1.8e-269 932.9 910 59.9
arahy.Tifrunner.gnm1.ann1.8XV151 Arachis hypogaea HOM05D003671 ORTHO05D004285 3.9e-269 931.8 916 63.2
Gohir.A03G088100 Gossypium hirsutum HOM05D003671 ORTHO05D004285 5.1e-269 931.4 887 63.4
Lalb_Chr03g0043701 Lupinus albus HOM05D003671 ORTHO05D004285 6.7e-269 931.0 896 62.9
arahy.Tifrunner.gnm1.ann1.616PIC Arachis hypogaea HOM05D003671 ORTHO05D004285 8.7e-269 930.6 916 63.1
TAR636G0316 Trochodendron aralioides HOM05D003671 ORTHO05D004285 3.3e-268 928.7 913 59.8
Glyma.09G277602 Glycine max HOM05D003671 ORTHO05D004285 5.6e-268 927.9 887 61.9
CiPaw.09G218900 Carya illinoinensis HOM05D003671 ORTHO05D004285 1.6e-267 926.4 901 60.3
Gohir.A03G087500 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.6e-267 926.4 889 61.4
TAR636G3051 Trochodendron aralioides HOM05D003671 ORTHO05D004285 2.1e-267 926.0 913 59.7
TWI53G1222 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 6.2e-267 924.5 890 62.0
Dinv11386 Davidia involucrata HOM05D003671 ORTHO05D004285 7.6e-265 917.5 781 68.0
VMungo1383G1272 Vigna mungo HOM05D003671 ORTHO05D004285 2.9e-264 915.6 864 63.4
Lj1g0018847 Lotus japonicus HOM05D003671 ORTHO05D004285 1.1e-263 913.7 896 59.7
TAR633G2716 Trochodendron aralioides HOM05D003671 ORTHO05D004285 3.2e-263 912.1 913 57.6
Lalb_Chr01g0023661 Lupinus albus HOM05D003671 ORTHO05D004285 2.7e-262 909.1 895 61.9
PGR004G1797 Punica granatum HOM05D003671 ORTHO05D004285 1.1e-255 887.1 864 57.9
Ca_07746_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 1.9e-255 886.3 900 60.0
Ca_07750_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 1.2e-254 883.6 860 60.3
MSTRG.18954 Avicennia marina HOM05D003671 ORTHO05D004285 7.9e-254 880.9 898 58.1
vmacro20357 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 7.9e-254 880.9 878 58.1
Cc06_g00530 Coffea canephora HOM05D003671 ORTHO05D004285 3.7e-251 872.1 884 58.1
Medtr7g072520 Medicago truncatula HOM05D003671 ORTHO05D004285 4.8e-251 871.7 898 58.4
Psat0s1450g0040 Pisum sativum HOM05D003671 ORTHO05D004285 9.1e-250 867.5 907 57.7
Medtr7g072590 Medicago truncatula HOM05D003671 ORTHO05D004285 3.2e-247 859.0 861 60.0
Rhsim04G0122600 Rhododendron simsii HOM05D003671 ORTHO05D004285 1.4e-245 853.6 906 55.1
TPR.G4424 Trifolium pratense HOM05D003671 ORTHO05D004285 5.1e-245 851.7 904 60.3
Lj1g0001828 Lotus japonicus HOM05D003671 ORTHO05D004285 1.5e-241 840.1 904 60.5
Lalb_Chr07g0190641 Lupinus albus HOM05D003671 ORTHO05D004285 4.5e-241 838.6 896 58.8
MSTRG.5514 Avicennia marina HOM05D003671 ORTHO05D004285 3.2e-239 832.4 900 57.2
Nn2g10354 Nelumbo nucifera HOM05D003671 ORTHO05D004285 1.6e-238 830.1 917 54.5
SGA_v2.0_scaffold85G26648 Striga asiatica HOM05D003671 ORTHO05D004285 3.9e-237 825.5 898 55.3
MBI15_g31431_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 8.5e-232 807.7 918 53.3
Migut.J00060 Erythranthe guttata HOM05D003671 ORTHO05D004285 1.5e-231 807.0 903 55.1
Lj3C942T7 Lonicera japonica HOM05D003671 ORTHO05D004285 8.0e-230 801.2 865 57.1
SGA_v2.0_scaffold373G50172 Striga asiatica HOM05D003671 ORTHO05D004285 1.3e-227 793.9 892 56.1
THA.LOC104806637 Tarenaya hassleriana HOM05D003671 ORTHO05D004285 8.3e-227 791.2 854 55.6
Nitab4.5_0002348g0020 Nicotiana tabacum HOM05D003671 ORTHO05D004285 1.0e-224 784.3 901 59.0
Peaxi162Scf00595g00423 Petunia axillaris HOM05D003671 ORTHO05D004285 3.4e-220 769.2 897 54.0
Solyc09g018310.4 Solanum lycopersicum HOM05D003671 ORTHO05D004285 7.5e-220 768.1 881 59.3
Sopen09g011320 Solanum pennellii HOM05D003671 ORTHO05D004285 9.8e-220 767.7 881 59.3
Ah.08g209720 Amaranthus hybridus HOM05D003671 ORTHO05D004285 1.7e-219 766.9 904 55.4
Nitab4.5_0007794g0010 Nicotiana tabacum HOM05D003671 ORTHO05D004285 3.7e-219 765.8 898 53.3
PGSC0003DMG400013061 Solanum tuberosum HOM05D003671 ORTHO05D004285 5.4e-218 761.9 881 57.4
Nitab4.5_0000126g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 7.0e-218 761.5 860 60.0
AUR62029686 Chenopodium quinoa HOM05D003671 ORTHO05D004285 9.1e-218 761.1 868 57.5
Hund03740 Selenicereus undatus HOM05D003671 ORTHO05D004285 1.3e-216 757.3 905 50.9
Oeu026963.1 Olea europaea HOM05D003671 ORTHO05D004285 3.8e-216 755.7 856 55.0
CAN.G604.1 Capsicum annuum HOM05D003671 ORTHO05D004285 6.6e-216 755.0 912 51.2
EL10Ac7g17060 Beta vulgaris HOM05D003671 ORTHO05D004285 2.5e-215 753.1 909 55.4
Nitab4.5_0002204g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 3.4e-212 742.7 858 54.0
Carub.0004s2047 Capsella rubella HOM05D003671 ORTHO05D004285 1.3e-211 740.7 885 53.3
Gohir.D02G108200 Gossypium hirsutum HOM05D003671 ORTHO05D004285 4.1e-210 735.7 766 55.1
vmacro08928 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 1.6e-209 733.8 898 54.2
CAN.G15.24 Capsicum annuum HOM05D003671 ORTHO05D004285 3.5e-209 732.6 841 56.6
Thhalv10016251m.g Eutrema salsugineum HOM05D003671 ORTHO05D004285 3.6e-206 722.6 895 52.0
Sc07g0005760 Simmondsia chinensis HOM05D003671 ORTHO05D004285 6.1e-206 721.8 906 52.1
Aa31LG5G23820 Aethionema arabicum HOM05D003671 ORTHO05D004285 2.6e-204 716.5 895 50.4
AT3G51650 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 7.5e-204 714.9 897 48.9
AT3G51640 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 1.7e-203 713.8 897 49.8
Oeu060440.1 Olea europaea HOM05D003671 ORTHO05D004285 1.1e-202 711.1 842 54.5
AL4G35770 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 3.5e-201 706.1 870 52.5
DCAR_021427 Daucus carota HOM05D003671 ORTHO05D004285 3.5e-201 706.1 843 52.6
GSVIVG01030211001 Vitis vinifera HOM05D003671 ORTHO05D004285 3.9e-200 702.6 730 59.3
Sp4g20820 Schrenkiella parvula HOM05D003671 ORTHO05D004285 1.1e-199 701.0 842 53.0
BraA09t39938Z Brassica rapa HOM05D003671 ORTHO05D004285 2.5e-199 699.9 865 54.0
ECA247G1347 Erigeron canadensis HOM05D003671 ORTHO05D004285 1.2e-198 697.6 890 50.4
A09p44780 Brassica napus HOM05D003671 ORTHO05D004285 1.4e-197 694.1 847 53.6
DCAR_010961 Daucus carota HOM05D003671 ORTHO05D004285 1.2e-196 691.0 836 48.9
BcaB01g00433 Brassica carinata HOM05D003671 ORTHO05D004285 3.4e-196 689.5 864 51.6
BcaB01g00498 Brassica carinata HOM05D003671 ORTHO05D004285 7.5e-196 688.3 871 53.3
CARHR133180 Cardamine hirsuta HOM05D003671 ORTHO05D004285 1.7e-195 687.2 869 53.3
BolC8t50300H Brassica oleracea HOM05D003671 ORTHO05D004285 6.4e-195 685.3 871 52.9
C08p26840 Brassica napus HOM05D003671 ORTHO05D004285 1.4e-194 684.1 853 53.6
Psat3g120920 Pisum sativum HOM05D003671 ORTHO05D004285 4.1e-194 682.6 847 50.6
AL5G32090 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 3.9e-192 676.0 873 49.1
PSO384G1707 Papaver somniferum HOM05D003671 ORTHO05D004285 6.8e-189 665.2 907 51.8
PSO339G1890 Papaver somniferum HOM05D003671 ORTHO05D004285 5.8e-188 662.1 908 51.7
Oeu060446.2 Olea europaea HOM05D003671 ORTHO05D004285 4.1e-186 656.0 927 49.7
Aqoxy2G00724 Aquilegia oxysepala HOM05D003671 ORTHO05D004285 5.1e-184 649.0 911 47.5
AUR62006358 Chenopodium quinoa HOM05D003671 ORTHO05D004285 3.1e-181 639.8 807 53.9
BcaB01g00434 Brassica carinata HOM05D003671 ORTHO05D004285 8.9e-181 638.3 889 49.4
C08p26830 Brassica napus HOM05D003671 ORTHO05D004285 1.5e-180 637.5 884 49.0
BolC8t50298H Brassica oleracea HOM05D003671 ORTHO05D004285 3.4e-180 636.3 906 49.0
A09p44750 Brassica napus HOM05D003671 ORTHO05D004285 3.6e-174 616.3 908 48.7
BraA09t39936Z Brassica rapa HOM05D003671 ORTHO05D004285 6.2e-174 615.5 913 48.6
Psat3g121000 Pisum sativum HOM05D003671 ORTHO05D004285 4.0e-173 612.8 755 51.9
TPR.G4425 Trifolium pratense HOM05D003671 ORTHO05D004285 2.2e-171 607.1 768 53.4
CARHR161250 Cardamine hirsuta HOM05D003671 ORTHO05D004285 5.4e-170 602.4 759 49.7
unitig_699.g19370 Utricularia gibba HOM05D003671 ORTHO05D004285 5.4e-162 575.9 870 49.2
MBI03_g38977_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 1.5e-159 567.8 902 45.1
PSO675G2859 Papaver somniferum HOM05D003671 ORTHO05D004285 1.8e-157 560.8 841 49.7
PSO541G0005 Papaver somniferum HOM05D003671 ORTHO05D004285 1.2e-156 558.1 838 48.3
Lsat_1_v5_gn_8_119680 Lactuca sativa HOM05D003671 ORTHO05D004285 2.8e-150 537.0 734 51.0
Peaxi162Scf00732g00447 Petunia axillaris HOM05D003671 ORTHO05D004285 1.1e-149 535.0 883 49.3
ECA236G1062 Erigeron canadensis HOM05D003671 ORTHO05D004285 4.1e-149 533.1 890 46.2
HanXRQChr16g0510341 Helianthus annuus HOM05D003671 ORTHO05D004285 1.5e-127 461.5 741 47.0
Sed0014254 Sechium edule HOM05D003671 ORTHO05D004285 1.6e-124 451.4 444 63.5
HanXRQChr16g0510331 Helianthus annuus HOM05D003671 ORTHO05D004285 2.9e-123 447.2 742 46.9
Nn5g26901 Nelumbo nucifera HOM05D003671 ORTHO05D004285 2.7e-116 424.1 647 51.3
HPP92_018092 Vanilla planifolia HOM05D003671 ORTHO05D004285 2.5e-114 417.5 882 40.2
SpUn1372_0010 Schrenkiella parvula HOM05D003671 ORTHO05D004285 6.8e-112 409.5 307 72.3
Os11g0113200 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 1.5e-106 391.7 923 39.2
Os12g0112600 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 3.2e-106 390.6 917 39.4
CDE07G1826 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 6.8e-104 382.9 890 37.6
Zm00001eb406310 Zea mays HOM05D003671 ORTHO05D004285 3.4e-103 380.6 921 38.7
CDE04G0380 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 4.4e-103 380.2 896 36.4
Zm00001eb195220 Zea mays HOM05D003671 ORTHO05D004285 7.5e-103 379.4 917 38.2
Zm00001eb163960 Zea mays HOM05D003671 ORTHO05D004285 8.3e-102 375.9 911 37.2
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 3.5e-84 317.4 866 36.0
VMungo1383G0904 Vigna mungo HOM05D003671 ORTHO05D004285 2.5e-82 311.2 314 54.5
ATR0012G011 Amborella trichopoda HOM05D003671 ORTHO05D004285 4.4e-79 300.4 875 36.1
SEGI_37069 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 7.1e-77 293.1 1000 34.6
Oeu060441.1 Olea europaea HOM05D003671 ORTHO05D004285 2.7e-68 264.6 376 44.1
AagrBONN_evm.TU.Sc2ySwM_344.630 Anthoceros agrestis HOM05D003671 ORTHO05D004285 1.3e-67 262.3 379 47.8
Mapoly0100s0047 Marchantia polymorpha HOM05D003671 ORTHO05D004285 1.7e-62 245.4 359 44.0
SEGI_27030 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 7.1e-61 240.0 297 46.8
CAN.G179.38 Capsicum annuum HOM05D003671 ORTHO05D004285 2.3e-59 235.0 260 52.7
SEGI_23390 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 3.0e-59 234.6 298 47.3
ATR0681G108 Amborella trichopoda HOM05D003671 ORTHO05D004285 1.1e-58 232.6 462 42.0
Oeu026958.1 Olea europaea HOM05D003671 ORTHO05D004285 4.8e-57 227.3 582 35.4
Pp3c12_1780 Physcomitrium patens HOM05D003671 ORTHO05D004285 1.5e-55 222.2 364 40.7
Sp5g10620 Schrenkiella parvula HOM05D003671 ORTHO05D004285 3.8e-54 217.6 320 42.8
Sc02g0000840 Simmondsia chinensis HOM05D003671 ORTHO05D004285 2.2e-46 191.8 299 42.1
SEGI_35920 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 2.1e-44 185.3 146 62.3
SEGI_38845 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 2.1e-44 185.3 280 42.5
TPR.G35754 Trifolium pratense HOM05D003671 ORTHO05D004285 1.5e-42 179.1 97 96.9
Haze_23239 Corylus avellana HOM05D003671 ORTHO05D004285 4.8e-41 174.1 263 58.9
MBI03_g10316_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 1.3e-38 166.0 181 54.1
ATR0681G103 Amborella trichopoda HOM05D003671 ORTHO05D004285 1.8e-19 102.4 157 40.8
FAN22G0087 Fragaria x ananassa HOM05D024163 ORTHO05D201659 2.0e-07 62.4 54 72.2
FAN10G0058 Fragaria x ananassa HOM05D024163 ORTHO05D208155 5.9e-07 60.8 54 70.4
FAN20G1809 Fragaria x ananassa HOM05D024163 ORTHO05D205019 5.9e-07 60.8 54 70.4


User provided reference genes

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